RNA–Protein interactions for RNA: ENST00000482578.2

TRIM2-207, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 773 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-207ENST00000482578 COL13A1Q5TAT6 717 aaPredicted RBP11.32□□□□□ -0.6
TRIM2-207ENST00000482578 OLFM4Q6UX06 510 aa11.32□□□□□ -0.6
TRIM2-207ENST00000482578 PNMA8AQ86V59 439 aaPredicted RBP11.32□□□□□ -0.6
TRIM2-207ENST00000482578 PSMD1Q99460 953 aa11.32□□□□□ -0.6
TRIM2-207ENST00000482578 MKRN1Q9UHC7 482 aaKnown RBP11.32□□□□□ -0.6
TRIM2-207ENST00000482578 ZNF541Q9H0D2 1346 aa11.32□□□□□ -0.6
TRIM2-207ENST00000482578 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
TRIM2-207ENST00000482578 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
TRIM2-207ENST00000482578 POTEJP0CG39 1038 aa11.31□□□□□ -0.6
TRIM2-207ENST00000482578 LMOD1P29536 600 aaPredicted RBP11.31□□□□□ -0.6
TRIM2-207ENST00000482578 EPHX2P34913 555 aa11.31□□□□□ -0.6
TRIM2-207ENST00000482578 SUSD4Q5VX71 490 aa11.31□□□□□ -0.6
TRIM2-207ENST00000482578 GIGYF2Q6Y7W6 1299 aaKnown RBP11.31□□□□□ -0.6
TRIM2-207ENST00000482578 GPC2Q8N158 579 aa11.31□□□□□ -0.6
TRIM2-207ENST00000482578 NLRP3Q96P20 1036 aa11.31□□□□□ -0.6
TRIM2-207ENST00000482578 BABAM1Q9NWV8 329 aa11.31□□□□□ -0.6
TRIM2-207ENST00000482578 CCDC88AQ3V6T2 1871 aa11.31□□□□□ -0.6
TRIM2-207ENST00000482578 FZD9O00144 591 aa11.3□□□□□ -0.6
TRIM2-207ENST00000482578 TCERG1O14776 1098 aaKnown RBP11.3□□□□□ -0.6
TRIM2-207ENST00000482578 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
TRIM2-207ENST00000482578 HSP90AB3PQ58FF7 597 aa11.3□□□□□ -0.6
TRIM2-207ENST00000482578 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
TRIM2-207ENST00000482578 CRAMP1Q96RY5 1269 aa11.3□□□□□ -0.6
TRIM2-207ENST00000482578 UTP14AQ9BVJ6 771 aaKnown RBP11.3□□□□□ -0.6
TRIM2-207ENST00000482578 GJA3Q9Y6H8 435 aa11.3□□□□□ -0.6
TRIM2-207ENST00000482578 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
TRIM2-207ENST00000482578 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
TRIM2-207ENST00000482578 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
TRIM2-207ENST00000482578 UBN2Q6ZU65 1347 aa11.3□□□□□ -0.6
TRIM2-207ENST00000482578 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
TRIM2-207ENST00000482578 RIC1Q4ADV7 1423 aa11.29□□□□□ -0.6
TRIM2-207ENST00000482578 TMEM88BA6NKF7 163 aa11.29□□□□□ -0.6
TRIM2-207ENST00000482578 CAPN15O75808 1086 aa11.29□□□□□ -0.6
TRIM2-207ENST00000482578 NTSR2O95665 410 aa11.29□□□□□ -0.6
TRIM2-207ENST00000482578 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
TRIM2-207ENST00000482578 WDR43Q15061 677 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRIM2-207ENST00000482578 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
TRIM2-207ENST00000482578 ZNF34Q8IZ26 560 aa11.29□□□□□ -0.6
TRIM2-207ENST00000482578 AIDAQ96BJ3 306 aa11.29□□□□□ -0.6
TRIM2-207ENST00000482578 CACNA1SQ13698 1873 aa11.29□□□□□ -0.6
TRIM2-207ENST00000482578 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
TRIM2-207ENST00000482578 TMPOP42166 694 aaKnown RBP11.28□□□□□ -0.6
TRIM2-207ENST00000482578 AIMP1Q12904 312 aaKnown RBP11.28□□□□□ -0.6
TRIM2-207ENST00000482578 SUPT20HQ8NEM7 779 aa11.28□□□□□ -0.6
TRIM2-207ENST00000482578 PASKQ96RG2 1323 aa11.28□□□□□ -0.6
TRIM2-207ENST00000482578 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
TRIM2-207ENST00000482578 KDM3BQ7LBC6 1761 aa11.27□□□□□ -0.61
TRIM2-207ENST00000482578 PPIP5K2O43314 1243 aa11.27□□□□□ -0.61
TRIM2-207ENST00000482578 NEUROD2Q15784 382 aa11.27□□□□□ -0.61
TRIM2-207ENST00000482578 CNTROBQ8N137 903 aa11.27□□□□□ -0.61
TRIM2-207ENST00000482578 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
TRIM2-207ENST00000482578 LAS1LQ9Y4W2 734 aaKnown RBP11.27□□□□□ -0.61
TRIM2-207ENST00000482578 MYBBP1AQ9BQG0 1328 aaKnown RBP11.27□□□□□ -0.61
TRIM2-207ENST00000482578 MAP1SQ66K74 1059 aaPredicted RBP11.26□□□□□ -0.61
TRIM2-207ENST00000482578 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
TRIM2-207ENST00000482578 XAGE3Q8WTP9 111 aa11.26□□□□□ -0.61
TRIM2-207ENST00000482578 VPS33BQ9H267 617 aa11.26□□□□□ -0.61
TRIM2-207ENST00000482578 ABT1Q9ULW3 272 aaKnown RBP11.26□□□□□ -0.61
TRIM2-207ENST00000482578 SCN4AP35499 1836 aa11.25□□□□□ -0.61
TRIM2-207ENST00000482578 BBOX1O75936 387 aa11.25□□□□□ -0.61
TRIM2-207ENST00000482578 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
TRIM2-207ENST00000482578 ANXA1P04083 346 aa11.25□□□□□ -0.61
TRIM2-207ENST00000482578 PDIA6Q15084 440 aa11.25□□□□□ -0.61
TRIM2-207ENST00000482578 SLC10A5Q5PT55 438 aa11.25□□□□□ -0.61
TRIM2-207ENST00000482578 DPP8Q6V1X1 898 aaPredicted RBP11.25□□□□□ -0.61
TRIM2-207ENST00000482578 COPS6Q7L5N1 327 aa11.25□□□□□ -0.61
TRIM2-207ENST00000482578 CCDC146Q8IYE0 955 aa11.25□□□□□ -0.61
TRIM2-207ENST00000482578 TRMT112Q9UI30 125 aaKnown RBP11.25□□□□□ -0.61
TRIM2-207ENST00000482578 ATP6V0A2Q9Y487 856 aa11.25□□□□□ -0.61
TRIM2-207ENST00000482578 CTCFP49711 727 aaPredicted RBP11.24□□□□□ -0.61
TRIM2-207ENST00000482578 VEGFBP49765 207 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 DDX10Q13206 875 aaKnown RBP11.24□□□□□ -0.61
TRIM2-207ENST00000482578 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 AOC3Q16853 763 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 PROSER3Q2NL68 480 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 DEFB115Q30KQ5 88 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 HDGFL1Q5TGJ6 251 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
TRIM2-207ENST00000482578 USP50Q70EL3 339 aaPredicted RBP11.24□□□□□ -0.61
TRIM2-207ENST00000482578 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 MPNDQ8N594 471 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 DDX21Q9NR30 783 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM2-207ENST00000482578 DLG5Q8TDM6 1919 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 ABCC4O15439 1325 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 SH3TC1Q8TE82 1336 aa11.24□□□□□ -0.61
TRIM2-207ENST00000482578 HCLS1P14317 486 aaPredicted RBP11.23□□□□□ -0.61
TRIM2-207ENST00000482578 ZNRF3Q9ULT6 936 aa11.23□□□□□ -0.61
TRIM2-207ENST00000482578 RASSF10A6NK89 507 aa11.22□□□□□ -0.61
TRIM2-207ENST00000482578 CHL1O00533 1208 aa11.22□□□□□ -0.61
TRIM2-207ENST00000482578 FOXN1O15353 648 aa11.22□□□□□ -0.61
TRIM2-207ENST00000482578 HOXB7P09629 217 aa11.22□□□□□ -0.61
TRIM2-207ENST00000482578 EPS15P42566 896 aa11.22□□□□□ -0.61
TRIM2-207ENST00000482578 SCNN1DP51172 638 aa11.22□□□□□ -0.61
TRIM2-207ENST00000482578 NUP98P52948 1817 aa11.22□□□□□ -0.61
TRIM2-207ENST00000482578 MAP2K1Q02750 393 aaPredicted RBP11.22□□□□□ -0.61
TRIM2-207ENST00000482578 GRAPQ13588 217 aa11.22□□□□□ -0.61
TRIM2-207ENST00000482578 TNIP1Q15025 636 aa11.22□□□□□ -0.61
TRIM2-207ENST00000482578 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms