RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 TERF1P54274 439 aa8.32□□□□□ -1.08
NUP35-208ENST00000472844 RACK1P63244 317 aaKnown RBP8.32□□□□□ -1.08
NUP35-208ENST00000472844 AKAP2Q9Y2D5 859 aa8.32□□□□□ -1.08
NUP35-208ENST00000472844 PCDHGB7Q9Y5F8 929 aa8.32□□□□□ -1.08
NUP35-208ENST00000472844 MAP3K7O43318 606 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 HIP1RO75146 1068 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 HSP90AB1P08238 724 aaKnown RBP8.31□□□□□ -1.08
NUP35-208ENST00000472844 INO80DQ53TQ3 878 aaPredicted RBP8.31□□□□□ -1.08
NUP35-208ENST00000472844 BRDTQ58F21 947 aaPredicted RBP8.31□□□□□ -1.08
NUP35-208ENST00000472844 CCDC70Q6NSX1 233 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 HDGFL2Q7Z4V5 671 aaPredicted RBP8.31□□□□□ -1.08
NUP35-208ENST00000472844 PGBD3Q8N328 593 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 MYRIPQ8NFW9 859 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 LRRN4Q8WUT4 740 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 PRKD2Q9BZL6 878 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 PPCSQ9HAB8 311 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 ZNF69Q9UC07 566 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 PUF60Q9UHX1 559 aaKnown RBP8.31□□□□□ -1.08
NUP35-208ENST00000472844 BOLA1Q9Y3E2 137 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 SH3BP1Q9Y3L3 701 aa8.31□□□□□ -1.08
NUP35-208ENST00000472844 DNMT3AQ9Y6K1 912 aaPredicted RBP8.31□□□□□ -1.08
NUP35-208ENST00000472844 DYTNA2CJ06 578 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 A6NJY4 79 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 MYL3P08590 195 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 EPHB1P54762 984 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 ATP2B2Q01814 1243 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 GRAMD1BQ3KR37 738 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 HOMER1Q86YM7 354 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 IFNL3Q8IZI9 196 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 CEP120Q8N960 986 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 ATL2Q8NHH9 583 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 CERKQ8TCT0 537 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 UPF1Q92900 1129 aaKnown RBP eCLIP8.3□□□□□ -1.08
NUP35-208ENST00000472844 ANP32EQ9BTT0 268 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 RNF19AQ9NV58 838 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 TDRD9Q8NDG6 1382 aaKnown RBP8.3□□□□□ -1.08
NUP35-208ENST00000472844 DNMBPQ6XZF7 1577 aa8.3□□□□□ -1.08
NUP35-208ENST00000472844 TOP2BQ02880 1626 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 TMEM238LA0A1B0GVL6 79 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 G3V3G9 751 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 CD46P15529 392 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 ATF3P18847 181 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 EMP3P54852 163 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 KIAA0907Q7Z7F0 614 aaPredicted RBP8.29□□□□□ -1.08
NUP35-208ENST00000472844 ZSCAN30Q86W11 494 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 EPS8L1Q8TE68 723 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 SH3TC2Q8TF17 1288 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 SRRTQ9BXP5 876 aaKnown RBP8.29□□□□□ -1.08
NUP35-208ENST00000472844 MUC3BQ9H195 1237 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 ENAMQ9NRM1 1142 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 CWC25Q9NXE8 425 aaPredicted RBP8.29□□□□□ -1.08
NUP35-208ENST00000472844 MRPS23Q9Y3D9 190 aaKnown RBP8.29□□□□□ -1.08
NUP35-208ENST00000472844 MAGI1Q96QZ7 1491 aaPredicted RBP8.29□□□□□ -1.08
NUP35-208ENST00000472844 CEP170Q5SW79 1584 aa8.29□□□□□ -1.08
NUP35-208ENST00000472844 RAD54L2Q9Y4B4 1467 aa8.28□□□□□ -1.08
NUP35-208ENST00000472844 RNASEH2AO75792 299 aaKnown RBP8.28□□□□□ -1.08
NUP35-208ENST00000472844 CT47B1P0C2W7 299 aaPredicted RBP8.28□□□□□ -1.08
NUP35-208ENST00000472844 GJA8P48165 433 aa8.28□□□□□ -1.08
NUP35-208ENST00000472844 PLCB3Q01970 1234 aa8.28□□□□□ -1.08
NUP35-208ENST00000472844 OTUD6BQ8N6M0 293 aa8.28□□□□□ -1.08
NUP35-208ENST00000472844 NGDNQ8NEJ9 315 aaKnown RBP8.28□□□□□ -1.08
NUP35-208ENST00000472844 E2F7Q96AV8 911 aa8.28□□□□□ -1.08
NUP35-208ENST00000472844 PRIMPOLQ96LW4 560 aa8.28□□□□□ -1.08
NUP35-208ENST00000472844 LRRC27Q9C0I9 530 aa8.28□□□□□ -1.08
NUP35-208ENST00000472844 SNTG2Q9NY99 539 aa8.28□□□□□ -1.08
NUP35-208ENST00000472844 MAPKBP1O60336 1514 aa8.28□□□□□ -1.08
NUP35-208ENST00000472844 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 NDUFB5O43674 189 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 ALDH1L1O75891 902 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 SEC13P55735 322 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 EN1Q05925 392 aaPredicted RBP8.27□□□□□ -1.09
NUP35-208ENST00000472844 MTMR3Q13615 1198 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 OCLNQ16625 522 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 ACBD5Q5T8D3 534 aaPredicted RBP8.27□□□□□ -1.09
NUP35-208ENST00000472844 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 KSR2Q6VAB6 950 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 DEPDC7Q96QD5 511 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 TRIM55Q9BYV6 548 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 CNTN3Q9P232 1028 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 POLG2Q9UHN1 485 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 ASAP1Q9ULH1 1129 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 NOD1Q9Y239 953 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 ADGRG1Q9Y653 693 aa8.27□□□□□ -1.09
NUP35-208ENST00000472844 PPRC1Q5VV67 1664 aaKnown RBP8.27□□□□□ -1.09
NUP35-208ENST00000472844 POLA1P09884 1462 aaPredicted RBP8.26□□□□□ -1.09
NUP35-208ENST00000472844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.26□□□□□ -1.09
NUP35-208ENST00000472844 SLC26A4O43511 780 aa8.26□□□□□ -1.09
NUP35-208ENST00000472844 SSBP05455 408 aaKnown RBP eCLIP8.26□□□□□ -1.09
NUP35-208ENST00000472844 CDKN1CP49918 316 aaPredicted RBP8.26□□□□□ -1.09
NUP35-208ENST00000472844 MMP14P50281 582 aa8.26□□□□□ -1.09
NUP35-208ENST00000472844 FAM160A1Q05DH4 1040 aa8.26□□□□□ -1.09
NUP35-208ENST00000472844 NR1H3Q13133 447 aa8.26□□□□□ -1.09
NUP35-208ENST00000472844 NCOA4Q13772 614 aa8.26□□□□□ -1.09
NUP35-208ENST00000472844 SIM2Q14190 667 aaPredicted RBP8.26□□□□□ -1.09
NUP35-208ENST00000472844 TTF1Q15361 905 aaPredicted RBP8.26□□□□□ -1.09
NUP35-208ENST00000472844 CDC37Q16543 378 aaPredicted RBP8.26□□□□□ -1.09
NUP35-208ENST00000472844 CCDC92Q53HC0 331 aaPredicted RBP8.26□□□□□ -1.09
NUP35-208ENST00000472844 ALFQ53S48 1182 aa8.26□□□□□ -1.09
NUP35-208ENST00000472844 KRT26Q7Z3Y9 468 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms