RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 ABCC12Q96J65 1359 aa25.45■■□□□ 1.67
GCFC2-207ENST00000470503 ZNF541Q9H0D2 1346 aa25.45■■□□□ 1.66
GCFC2-207ENST00000470503 SUSD4Q5VX71 490 aa25.45■■□□□ 1.66
GCFC2-207ENST00000470503 OLFM4Q6UX06 510 aa25.45■■□□□ 1.66
GCFC2-207ENST00000470503 ZBTB3Q9H5J0 574 aa25.45■■□□□ 1.66
GCFC2-207ENST00000470503 UBN2Q6ZU65 1347 aa25.44■■□□□ 1.66
GCFC2-207ENST00000470503 GPTP24298 496 aa25.44■■□□□ 1.66
GCFC2-207ENST00000470503 EPHX2P34913 555 aa25.44■■□□□ 1.66
GCFC2-207ENST00000470503 RIPK4P57078 832 aa25.44■■□□□ 1.66
GCFC2-207ENST00000470503 TNS4Q8IZW8 715 aa25.44■■□□□ 1.66
GCFC2-207ENST00000470503 CACNA1SQ13698 1873 aa25.44■■□□□ 1.66
GCFC2-207ENST00000470503 EIF6P56537 245 aaKnown RBP25.43■■□□□ 1.66
GCFC2-207ENST00000470503 NLRP3Q96P20 1036 aa25.43■■□□□ 1.66
GCFC2-207ENST00000470503 TMX4Q9H1E5 349 aaPredicted RBP25.43■■□□□ 1.66
GCFC2-207ENST00000470503 SNED1Q8TER0 1413 aa25.43■■□□□ 1.66
GCFC2-207ENST00000470503 RNF123Q5XPI4 1314 aa25.42■■□□□ 1.66
GCFC2-207ENST00000470503 DLG5Q8TDM6 1919 aa25.42■■□□□ 1.66
GCFC2-207ENST00000470503 NTSR2O95665 410 aa25.42■■□□□ 1.66
GCFC2-207ENST00000470503 ITGBL1O95965 494 aaPredicted RBP25.42■■□□□ 1.66
GCFC2-207ENST00000470503 EAPPQ56P03 285 aaPredicted RBP25.42■■□□□ 1.66
GCFC2-207ENST00000470503 SLC10A5Q5PT55 438 aa25.42■■□□□ 1.66
GCFC2-207ENST00000470503 VPS33BQ9H267 617 aa25.42■■□□□ 1.66
GCFC2-207ENST00000470503 TMEM88BA6NKF7 163 aa25.41■■□□□ 1.66
GCFC2-207ENST00000470503 HSP90AB3PQ58FF7 597 aa25.41■■□□□ 1.66
GCFC2-207ENST00000470503 CLEC11AQ9Y240 323 aa25.41■■□□□ 1.66
GCFC2-207ENST00000470503 CNTNAP1P78357 1384 aa25.41■■□□□ 1.66
GCFC2-207ENST00000470503 LRP10Q7Z4F1 713 aa25.4■■□□□ 1.66
GCFC2-207ENST00000470503 UTP14AQ9BVJ6 771 aaKnown RBP25.4■■□□□ 1.66
GCFC2-207ENST00000470503 MKRN1Q9UHC7 482 aaKnown RBP25.4■■□□□ 1.66
GCFC2-207ENST00000470503 EIF2S2P20042 333 aaKnown RBP25.39■■□□□ 1.66
GCFC2-207ENST00000470503 TMPOP42166 694 aaKnown RBP25.39■■□□□ 1.66
GCFC2-207ENST00000470503 PDIA6Q15084 440 aa25.39■■□□□ 1.66
GCFC2-207ENST00000470503 NUP98P52948 1817 aa25.39■■□□□ 1.65
GCFC2-207ENST00000470503 PPEF1O14829 653 aaPredicted RBP25.38■■□□□ 1.65
GCFC2-207ENST00000470503 LARGE2Q8N3Y3 721 aa25.38■■□□□ 1.65
GCFC2-207ENST00000470503 LMOD1P29536 600 aaPredicted RBP25.37■■□□□ 1.65
GCFC2-207ENST00000470503 CNTROBQ8N137 903 aa25.37■■□□□ 1.65
GCFC2-207ENST00000470503 ATP6V0A2Q9Y487 856 aa25.36■■□□□ 1.65
GCFC2-207ENST00000470503 BBOX1O75936 387 aa25.35■■□□□ 1.65
GCFC2-207ENST00000470503 SUPT20HQ8NEM7 779 aa25.35■■□□□ 1.65
GCFC2-207ENST00000470503 PCNTO95613 3336 aa25.34■■□□□ 1.65
GCFC2-207ENST00000470503 NIM1KQ8IY84 436 aa25.34■■□□□ 1.65
GCFC2-207ENST00000470503 GJA3Q9Y6H8 435 aa25.33■■□□□ 1.65
GCFC2-207ENST00000470503 CHL1O00533 1208 aa25.32■■□□□ 1.64
GCFC2-207ENST00000470503 COPS6Q7L5N1 327 aa25.32■■□□□ 1.64
GCFC2-207ENST00000470503 DDX21Q9NR30 783 aaKnown RBP eCLIP25.32■■□□□ 1.64
GCFC2-207ENST00000470503 RASSF10A6NK89 507 aa25.31■■□□□ 1.64
GCFC2-207ENST00000470503 TCIRG1Q13488 830 aa25.31■■□□□ 1.64
GCFC2-207ENST00000470503 PROSER3Q2NL68 480 aa25.31■■□□□ 1.64
GCFC2-207ENST00000470503 MAP1SQ66K74 1059 aaPredicted RBP25.31■■□□□ 1.64
GCFC2-207ENST00000470503 C3orf67Q6ZVT6 689 aa25.31■■□□□ 1.64
GCFC2-207ENST00000470503 USP50Q70EL3 339 aaPredicted RBP25.31■■□□□ 1.64
GCFC2-207ENST00000470503 SP8Q8IXZ3 490 aa25.31■■□□□ 1.64
GCFC2-207ENST00000470503 RTFDC1Q9BY42 306 aaPredicted RBP25.31■■□□□ 1.64
GCFC2-207ENST00000470503 MYBBP1AQ9BQG0 1328 aaKnown RBP25.31■■□□□ 1.64
GCFC2-207ENST00000470503 PPIP5K2O43314 1243 aa25.3■■□□□ 1.64
GCFC2-207ENST00000470503 HOXB7P09629 217 aa25.3■■□□□ 1.64
GCFC2-207ENST00000470503 NLRP10Q86W26 655 aa25.3■■□□□ 1.64
GCFC2-207ENST00000470503 AIDAQ96BJ3 306 aa25.3■■□□□ 1.64
GCFC2-207ENST00000470503 PRDM10Q9NQV6 1147 aa25.3■■□□□ 1.64
GCFC2-207ENST00000470503 ADAMTSL1Q8N6G6 1762 aa25.3■■□□□ 1.64
GCFC2-207ENST00000470503 VEGFBP49765 207 aa25.29■■□□□ 1.64
GCFC2-207ENST00000470503 SCNN1DP51172 638 aa25.29■■□□□ 1.64
GCFC2-207ENST00000470503 DEFB115Q30KQ5 88 aa25.29■■□□□ 1.64
GCFC2-207ENST00000470503 TMC4Q7Z404 712 aa25.29■■□□□ 1.64
GCFC2-207ENST00000470503 XAGE3Q8WTP9 111 aa25.29■■□□□ 1.64
GCFC2-207ENST00000470503 RUNDC1Q96C34 613 aa25.29■■□□□ 1.64
GCFC2-207ENST00000470503 TCERG1O14776 1098 aaKnown RBP25.28■■□□□ 1.64
GCFC2-207ENST00000470503 ANXA1P04083 346 aa25.28■■□□□ 1.64
GCFC2-207ENST00000470503 ZNRF3Q9ULT6 936 aa25.28■■□□□ 1.64
GCFC2-207ENST00000470503 ABCC4O15439 1325 aa25.28■■□□□ 1.64
GCFC2-207ENST00000470503 SH3TC1Q8TE82 1336 aa25.28■■□□□ 1.64
GCFC2-207ENST00000470503 CTCFP49711 727 aaPredicted RBP25.27■■□□□ 1.64
GCFC2-207ENST00000470503 AIMP1Q12904 312 aaKnown RBP25.27■■□□□ 1.64
GCFC2-207ENST00000470503 DDX46Q7L014 1031 aaKnown RBP25.27■■□□□ 1.64
GCFC2-207ENST00000470503 TRMT112Q9UI30 125 aaKnown RBP25.27■■□□□ 1.64
GCFC2-207ENST00000470503 EPS15P42566 896 aa25.26■■□□□ 1.63
GCFC2-207ENST00000470503 WDR43Q15061 677 aaKnown RBP eCLIP25.26■■□□□ 1.63
GCFC2-207ENST00000470503 DDX10Q13206 875 aaKnown RBP25.25■■□□□ 1.63
GCFC2-207ENST00000470503 NEUROD2Q15784 382 aa25.25■■□□□ 1.63
GCFC2-207ENST00000470503 DPP8Q6V1X1 898 aaPredicted RBP25.25■■□□□ 1.63
GCFC2-207ENST00000470503 MPNDQ8N594 471 aa25.25■■□□□ 1.63
GCFC2-207ENST00000470503 WBP1LQ9NX94 342 aa25.25■■□□□ 1.63
GCFC2-207ENST00000470503 COL4A5P29400 1685 aa25.25■■□□□ 1.63
GCFC2-207ENST00000470503 FOXN1O15353 648 aa25.24■■□□□ 1.63
GCFC2-207ENST00000470503 GRAPQ13588 217 aa25.24■■□□□ 1.63
GCFC2-207ENST00000470503 AOC3Q16853 763 aa25.24■■□□□ 1.63
GCFC2-207ENST00000470503 PLBD2Q8NHP8 589 aa25.24■■□□□ 1.63
GCFC2-207ENST00000470503 GRAPLQ8TC17 118 aaPredicted RBP25.24■■□□□ 1.63
GCFC2-207ENST00000470503 ADARB2Q9NS39 739 aaKnown RBP25.24■■□□□ 1.63
GCFC2-207ENST00000470503 CDHR2Q9BYE9 1310 aa25.23■■□□□ 1.63
GCFC2-207ENST00000470503 CAPN15O75808 1086 aa25.23■■□□□ 1.63
GCFC2-207ENST00000470503 HCLS1P14317 486 aaPredicted RBP25.23■■□□□ 1.63
GCFC2-207ENST00000470503 MAP2K1Q02750 393 aaPredicted RBP25.23■■□□□ 1.63
GCFC2-207ENST00000470503 KIAA2012Q0VF49 1180 aa25.23■■□□□ 1.63
GCFC2-207ENST00000470503 NECTIN2Q92692 538 aa25.23■■□□□ 1.63
GCFC2-207ENST00000470503 GPRC5DQ9NZD1 345 aa25.23■■□□□ 1.63
GCFC2-207ENST00000470503 DBF4Q9UBU7 674 aaPredicted RBP25.23■■□□□ 1.63
GCFC2-207ENST00000470503 ABT1Q9ULW3 272 aaKnown RBP25.23■■□□□ 1.63
GCFC2-207ENST00000470503 TRIM35Q9UPQ4 493 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms