RNA–Protein interactions for RNA: ENST00000466432.1

SRRT-207, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-207ENST00000466432 GPTP24298 496 aa17.27■□□□□ 0.36
SRRT-207ENST00000466432 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.36
SRRT-207ENST00000466432 PSMD1Q99460 953 aa17.27■□□□□ 0.36
SRRT-207ENST00000466432 PROSER3Q2NL68 480 aa17.26■□□□□ 0.35
SRRT-207ENST00000466432 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
SRRT-207ENST00000466432 SYNE4Q8N205 404 aa17.26■□□□□ 0.35
SRRT-207ENST00000466432 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
SRRT-207ENST00000466432 CREBZFQ9NS37 354 aa17.26■□□□□ 0.35
SRRT-207ENST00000466432 IQCA1LA6NCM1 817 aa17.25■□□□□ 0.35
SRRT-207ENST00000466432 ITGBL1O95965 494 aaPredicted RBP17.25■□□□□ 0.35
SRRT-207ENST00000466432 TMPOP42166 694 aaKnown RBP17.25■□□□□ 0.35
SRRT-207ENST00000466432 LDHDQ86WU2 507 aa17.25■□□□□ 0.35
SRRT-207ENST00000466432 PNNQ9H307 717 aaKnown RBP17.25■□□□□ 0.35
SRRT-207ENST00000466432 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
SRRT-207ENST00000466432 TSPYL4Q9UJ04 414 aa17.25■□□□□ 0.35
SRRT-207ENST00000466432 HSPA1AP0DMV8 641 aaKnown RBP17.24■□□□□ 0.35
SRRT-207ENST00000466432 HSPA1BP0DMV9 641 aaKnown RBP17.24■□□□□ 0.35
SRRT-207ENST00000466432 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
SRRT-207ENST00000466432 RIPK4P57078 832 aa17.24■□□□□ 0.35
SRRT-207ENST00000466432 CRAMP1Q96RY5 1269 aa17.24■□□□□ 0.35
SRRT-207ENST00000466432 ANXA1P04083 346 aa17.23■□□□□ 0.35
SRRT-207ENST00000466432 CC2D2BQ6DHV5 1058 aa17.23■□□□□ 0.35
SRRT-207ENST00000466432 RNF123Q5XPI4 1314 aa17.22■□□□□ 0.35
SRRT-207ENST00000466432 DDX60Q8IY21 1712 aaKnown RBP17.22■□□□□ 0.35
SRRT-207ENST00000466432 SLC10A5Q5PT55 438 aa17.22■□□□□ 0.35
SRRT-207ENST00000466432 CNTNAP1P78357 1384 aa17.22■□□□□ 0.35
SRRT-207ENST00000466432 TAF1P21675 1872 aa17.22■□□□□ 0.35
SRRT-207ENST00000466432 LRRC37AA6NMS7 1700 aa17.21■□□□□ 0.35
SRRT-207ENST00000466432 EPHX2P34913 555 aa17.21■□□□□ 0.35
SRRT-207ENST00000466432 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.35
SRRT-207ENST00000466432 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
SRRT-207ENST00000466432 PARP10Q53GL7 1025 aa17.21■□□□□ 0.35
SRRT-207ENST00000466432 GPC2Q8N158 579 aa17.21■□□□□ 0.35
SRRT-207ENST00000466432 HACL1Q9UJ83 578 aa17.21■□□□□ 0.35
SRRT-207ENST00000466432 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
SRRT-207ENST00000466432 CHL1O00533 1208 aa17.2■□□□□ 0.34
SRRT-207ENST00000466432 EIF2S2P20042 333 aaKnown RBP17.2■□□□□ 0.34
SRRT-207ENST00000466432 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
SRRT-207ENST00000466432 MKRN1Q9UHC7 482 aaKnown RBP17.2■□□□□ 0.34
SRRT-207ENST00000466432 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
SRRT-207ENST00000466432 PPEF1O14829 653 aaPredicted RBP17.19■□□□□ 0.34
SRRT-207ENST00000466432 PPP1R42Q7Z4L9 355 aa17.19■□□□□ 0.34
SRRT-207ENST00000466432 COL4A1P02462 1669 aa17.19■□□□□ 0.34
SRRT-207ENST00000466432 SCNN1DP51172 638 aa17.18■□□□□ 0.34
SRRT-207ENST00000466432 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
SRRT-207ENST00000466432 GRIPAP1Q4V328 841 aa17.18■□□□□ 0.34
SRRT-207ENST00000466432 COPS6Q7L5N1 327 aa17.18■□□□□ 0.34
SRRT-207ENST00000466432 CCDC146Q8IYE0 955 aa17.18■□□□□ 0.34
SRRT-207ENST00000466432 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
SRRT-207ENST00000466432 ABCC4O15439 1325 aa17.18■□□□□ 0.34
SRRT-207ENST00000466432 THSD7BQ9C0I4 1608 aa17.18■□□□□ 0.34
SRRT-207ENST00000466432 EAPPQ56P03 285 aaPredicted RBP17.17■□□□□ 0.34
SRRT-207ENST00000466432 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
SRRT-207ENST00000466432 XAGE3Q8WTP9 111 aa17.17■□□□□ 0.34
SRRT-207ENST00000466432 UTP14AQ9BVJ6 771 aaKnown RBP17.17■□□□□ 0.34
SRRT-207ENST00000466432 DDX21Q9NR30 783 aaKnown RBP eCLIP17.17■□□□□ 0.34
SRRT-207ENST00000466432 ATP6V0A2Q9Y487 856 aa17.17■□□□□ 0.34
SRRT-207ENST00000466432 PNMA8AQ86V59 439 aaPredicted RBP17.16■□□□□ 0.34
SRRT-207ENST00000466432 JDP2Q8WYK2 163 aa17.16■□□□□ 0.34
SRRT-207ENST00000466432 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
SRRT-207ENST00000466432 NLRP3Q96P20 1036 aa17.16■□□□□ 0.34
SRRT-207ENST00000466432 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
SRRT-207ENST00000466432 TMEM88BA6NKF7 163 aa17.15■□□□□ 0.34
SRRT-207ENST00000466432 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
SRRT-207ENST00000466432 MAP1SQ66K74 1059 aaPredicted RBP17.15■□□□□ 0.34
SRRT-207ENST00000466432 TRPM7Q96QT4 1865 aa17.15■□□□□ 0.34
SRRT-207ENST00000466432 EPS15P42566 896 aa17.14■□□□□ 0.33
SRRT-207ENST00000466432 EIF6P56537 245 aaKnown RBP17.14■□□□□ 0.33
SRRT-207ENST00000466432 TNS4Q8IZW8 715 aa17.14■□□□□ 0.33
SRRT-207ENST00000466432 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
SRRT-207ENST00000466432 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
SRRT-207ENST00000466432 RUNDC1Q96C34 613 aa17.14■□□□□ 0.33
SRRT-207ENST00000466432 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
SRRT-207ENST00000466432 VEGFBP49765 207 aa17.13■□□□□ 0.33
SRRT-207ENST00000466432 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
SRRT-207ENST00000466432 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
SRRT-207ENST00000466432 AOC3Q16853 763 aa17.13■□□□□ 0.33
SRRT-207ENST00000466432 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
SRRT-207ENST00000466432 VPS33BQ9H267 617 aa17.13■□□□□ 0.33
SRRT-207ENST00000466432 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
SRRT-207ENST00000466432 ADAMTS8Q9UP79 889 aa17.13■□□□□ 0.33
SRRT-207ENST00000466432 GJA3Q9Y6H8 435 aa17.13■□□□□ 0.33
SRRT-207ENST00000466432 RASSF10A6NK89 507 aa17.12■□□□□ 0.33
SRRT-207ENST00000466432 FOXN1O15353 648 aa17.12■□□□□ 0.33
SRRT-207ENST00000466432 ANP32CO43423 234 aa17.12■□□□□ 0.33
SRRT-207ENST00000466432 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
SRRT-207ENST00000466432 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
SRRT-207ENST00000466432 PPIP5K2O43314 1243 aa17.11■□□□□ 0.33
SRRT-207ENST00000466432 HOXB7P09629 217 aa17.11■□□□□ 0.33
SRRT-207ENST00000466432 SP8Q8IXZ3 490 aa17.11■□□□□ 0.33
SRRT-207ENST00000466432 NIM1KQ8IY84 436 aa17.11■□□□□ 0.33
SRRT-207ENST00000466432 ISCA1Q9BUE6 129 aa17.11■□□□□ 0.33
SRRT-207ENST00000466432 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
SRRT-207ENST00000466432 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
SRRT-207ENST00000466432 BBOX1O75936 387 aa17.1■□□□□ 0.33
SRRT-207ENST00000466432 ZNF853P0CG23 659 aa17.1■□□□□ 0.33
SRRT-207ENST00000466432 CXCL9Q07325 125 aa17.1■□□□□ 0.33
SRRT-207ENST00000466432 GRAPQ13588 217 aa17.1■□□□□ 0.33
SRRT-207ENST00000466432 PLBD2Q8NHP8 589 aa17.1■□□□□ 0.33
SRRT-207ENST00000466432 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms