RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 HOXA10P31260 410 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-214ENST00000465399 EPHX2P34913 555 aa18.68■□□□□ 0.58
ATG4B-214ENST00000465399 GRIPAP1Q4V328 841 aa18.68■□□□□ 0.58
ATG4B-214ENST00000465399 SUSD4Q5VX71 490 aa18.68■□□□□ 0.58
ATG4B-214ENST00000465399 GIGYF2Q6Y7W6 1299 aaKnown RBP18.68■□□□□ 0.58
ATG4B-214ENST00000465399 ZNF34Q8IZ26 560 aa18.68■□□□□ 0.58
ATG4B-214ENST00000465399 TNS4Q8IZW8 715 aa18.68■□□□□ 0.58
ATG4B-214ENST00000465399 GPC2Q8N158 579 aa18.68■□□□□ 0.58
ATG4B-214ENST00000465399 RBM17Q96I25 401 aaKnown RBP18.68■□□□□ 0.58
ATG4B-214ENST00000465399 MKRN1Q9UHC7 482 aaKnown RBP18.68■□□□□ 0.58
ATG4B-214ENST00000465399 CLEC11AQ9Y240 323 aa18.68■□□□□ 0.58
ATG4B-214ENST00000465399 PASKQ96RG2 1323 aa18.68■□□□□ 0.58
ATG4B-214ENST00000465399 LAMB2P55268 1798 aa18.68■□□□□ 0.58
ATG4B-214ENST00000465399 RIPK4P57078 832 aa18.67■□□□□ 0.58
ATG4B-214ENST00000465399 PPP1R42Q7Z4L9 355 aa18.67■□□□□ 0.58
ATG4B-214ENST00000465399 PNMA8AQ86V59 439 aaPredicted RBP18.67■□□□□ 0.58
ATG4B-214ENST00000465399 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
ATG4B-214ENST00000465399 NTSR2O95665 410 aa18.66■□□□□ 0.58
ATG4B-214ENST00000465399 EIF2S2P20042 333 aaKnown RBP18.66■□□□□ 0.58
ATG4B-214ENST00000465399 LMOD3Q0VAK6 560 aa18.66■□□□□ 0.58
ATG4B-214ENST00000465399 RALBP1Q15311 655 aa18.66■□□□□ 0.58
ATG4B-214ENST00000465399 PARP10Q53GL7 1025 aa18.66■□□□□ 0.58
ATG4B-214ENST00000465399 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-214ENST00000465399 EIF6P56537 245 aaKnown RBP18.65■□□□□ 0.58
ATG4B-214ENST00000465399 CRAMP1Q96RY5 1269 aa18.65■□□□□ 0.58
ATG4B-214ENST00000465399 BABAM1Q9NWV8 329 aa18.65■□□□□ 0.58
ATG4B-214ENST00000465399 CNTNAP1P78357 1384 aa18.65■□□□□ 0.58
ATG4B-214ENST00000465399 COL4A5P29400 1685 aa18.64■□□□□ 0.57
ATG4B-214ENST00000465399 TMEM88BA6NKF7 163 aa18.64■□□□□ 0.57
ATG4B-214ENST00000465399 TMX4Q9H1E5 349 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-214ENST00000465399 TCERG1O14776 1098 aaKnown RBP18.63■□□□□ 0.57
ATG4B-214ENST00000465399 ITGBL1O95965 494 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-214ENST00000465399 LARGE2Q8N3Y3 721 aa18.63■□□□□ 0.57
ATG4B-214ENST00000465399 NLRP3Q96P20 1036 aa18.63■□□□□ 0.57
ATG4B-214ENST00000465399 UTP14AQ9BVJ6 771 aaKnown RBP18.63■□□□□ 0.57
ATG4B-214ENST00000465399 GJA3Q9Y6H8 435 aa18.63■□□□□ 0.57
ATG4B-214ENST00000465399 LTBP1Q14766 1721 aa18.63■□□□□ 0.57
ATG4B-214ENST00000465399 CAPN15O75808 1086 aa18.62■□□□□ 0.57
ATG4B-214ENST00000465399 LMOD1P29536 600 aaPredicted RBP18.62■□□□□ 0.57
ATG4B-214ENST00000465399 TMPOP42166 694 aaKnown RBP18.62■□□□□ 0.57
ATG4B-214ENST00000465399 PDIA6Q15084 440 aa18.62■□□□□ 0.57
ATG4B-214ENST00000465399 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
ATG4B-214ENST00000465399 HSP90AB3PQ58FF7 597 aa18.61■□□□□ 0.57
ATG4B-214ENST00000465399 MAP1SQ66K74 1059 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-214ENST00000465399 TRPM7Q96QT4 1865 aa18.6■□□□□ 0.57
ATG4B-214ENST00000465399 ANXA1P04083 346 aa18.6■□□□□ 0.57
ATG4B-214ENST00000465399 PROSER3Q2NL68 480 aa18.6■□□□□ 0.57
ATG4B-214ENST00000465399 C3orf67Q6ZVT6 689 aa18.6■□□□□ 0.57
ATG4B-214ENST00000465399 NIM1KQ8IY84 436 aa18.6■□□□□ 0.57
ATG4B-214ENST00000465399 CNTROBQ8N137 903 aa18.6■□□□□ 0.57
ATG4B-214ENST00000465399 ABCC4O15439 1325 aa18.59■□□□□ 0.57
ATG4B-214ENST00000465399 SLC10A5Q5PT55 438 aa18.59■□□□□ 0.57
ATG4B-214ENST00000465399 TAF1P21675 1872 aa18.58■□□□□ 0.57
ATG4B-214ENST00000465399 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.57
ATG4B-214ENST00000465399 PPIP5K2O43314 1243 aa18.58■□□□□ 0.56
ATG4B-214ENST00000465399 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.56
ATG4B-214ENST00000465399 NEUROD2Q15784 382 aa18.58■□□□□ 0.56
ATG4B-214ENST00000465399 COPS6Q7L5N1 327 aa18.58■□□□□ 0.56
ATG4B-214ENST00000465399 NECTIN2Q92692 538 aa18.58■□□□□ 0.56
ATG4B-214ENST00000465399 ATP6V0A2Q9Y487 856 aa18.58■□□□□ 0.56
ATG4B-214ENST00000465399 VEGFBP49765 207 aa18.57■□□□□ 0.56
ATG4B-214ENST00000465399 SCNN1DP51172 638 aa18.57■□□□□ 0.56
ATG4B-214ENST00000465399 SLC51AQ86UW1 340 aa18.57■□□□□ 0.56
ATG4B-214ENST00000465399 SUPT20HQ8NEM7 779 aa18.57■□□□□ 0.56
ATG4B-214ENST00000465399 XAGE3Q8WTP9 111 aa18.57■□□□□ 0.56
ATG4B-214ENST00000465399 AIDAQ96BJ3 306 aa18.57■□□□□ 0.56
ATG4B-214ENST00000465399 VPS33BQ9H267 617 aa18.57■□□□□ 0.56
ATG4B-214ENST00000465399 DDX60Q8IY21 1712 aaKnown RBP18.57■□□□□ 0.56
ATG4B-214ENST00000465399 AOC3Q16853 763 aa18.56■□□□□ 0.56
ATG4B-214ENST00000465399 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
ATG4B-214ENST00000465399 DDX21Q9NR30 783 aaKnown RBP eCLIP18.56■□□□□ 0.56
ATG4B-214ENST00000465399 LAS1LQ9Y4W2 734 aaKnown RBP18.56■□□□□ 0.56
ATG4B-214ENST00000465399 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
ATG4B-214ENST00000465399 FOXN1O15353 648 aa18.55■□□□□ 0.56
ATG4B-214ENST00000465399 BBOX1O75936 387 aa18.55■□□□□ 0.56
ATG4B-214ENST00000465399 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
ATG4B-214ENST00000465399 DEFB115Q30KQ5 88 aa18.55■□□□□ 0.56
ATG4B-214ENST00000465399 USP50Q70EL3 339 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-214ENST00000465399 NLRP10Q86W26 655 aa18.55■□□□□ 0.56
ATG4B-214ENST00000465399 TRMT112Q9UI30 125 aaKnown RBP18.55■□□□□ 0.56
ATG4B-214ENST00000465399 ABT1Q9ULW3 272 aaKnown RBP18.55■□□□□ 0.56
ATG4B-214ENST00000465399 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
ATG4B-214ENST00000465399 RASSF10A6NK89 507 aa18.54■□□□□ 0.56
ATG4B-214ENST00000465399 CHL1O00533 1208 aa18.54■□□□□ 0.56
ATG4B-214ENST00000465399 HCLS1P14317 486 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-214ENST00000465399 EPS15P42566 896 aa18.54■□□□□ 0.56
ATG4B-214ENST00000465399 TCIRG1Q13488 830 aa18.54■□□□□ 0.56
ATG4B-214ENST00000465399 DPP8Q6V1X1 898 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-214ENST00000465399 DDX46Q7L014 1031 aaKnown RBP18.54■□□□□ 0.56
ATG4B-214ENST00000465399 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
ATG4B-214ENST00000465399 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
ATG4B-214ENST00000465399 SP8Q8IXZ3 490 aa18.53■□□□□ 0.56
ATG4B-214ENST00000465399 RTFDC1Q9BY42 306 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-214ENST00000465399 CHPF2Q9P2E5 772 aa18.53■□□□□ 0.56
ATG4B-214ENST00000465399 ZNRF3Q9ULT6 936 aa18.53■□□□□ 0.56
ATG4B-214ENST00000465399 CTCFP49711 727 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-214ENST00000465399 KRT24Q2M2I5 525 aa18.52■□□□□ 0.56
ATG4B-214ENST00000465399 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.56
ATG4B-214ENST00000465399 MPNDQ8N594 471 aa18.52■□□□□ 0.56
ATG4B-214ENST00000465399 PRDM10Q9NQV6 1147 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms