RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	PRDM6	Q9NQX0	595 aa		11.48	□□□□□ -0.57
NCSTN-209	ENST00000459963	TRIOBP	Q9H2D6	2365 aa		11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	AKAP11	Q9UKA4	1901 aa		11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	SOS1	Q07889	1333 aa	Predicted RBP	11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963		H0YGN5	161 aa		11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	IARS	P41252	1262 aa	Known RBP	11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	INTS3	Q68E01	1043 aa	Known RBP	11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	CCDC102A	Q96A19	550 aa		11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	CSRNP1	Q96S65	589 aa		11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	RBM27	Q9P2N5	1060 aa	Known RBP	11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	PCDHB8	Q9UN66	801 aa		11.47	□□□□□ -0.57
NCSTN-209	ENST00000459963	ERVV-2	B6SEH9	535 aa		11.46	□□□□□ -0.57
NCSTN-209	ENST00000459963	PTCD1	O75127	700 aa	Known RBP	11.46	□□□□□ -0.57
NCSTN-209	ENST00000459963	SEC24B	O95487	1268 aa		11.46	□□□□□ -0.57
NCSTN-209	ENST00000459963	EIF6	P56537	245 aa	Known RBP	11.46	□□□□□ -0.57
NCSTN-209	ENST00000459963	HSP90AB2P	Q58FF8	381 aa		11.46	□□□□□ -0.57
NCSTN-209	ENST00000459963	TMC1	Q8TDI8	760 aa		11.46	□□□□□ -0.57
NCSTN-209	ENST00000459963	UNC80	Q8N2C7	3258 aa		11.46	□□□□□ -0.58
NCSTN-209	ENST00000459963	BCOR	Q6W2J9	1755 aa		11.46	□□□□□ -0.58
NCSTN-209	ENST00000459963	ARFGEF2	Q9Y6D5	1785 aa		11.46	□□□□□ -0.58
NCSTN-209	ENST00000459963		A0A1W2PP64	1363 aa		11.45	□□□□□ -0.58
NCSTN-209	ENST00000459963	CACNA1S	Q13698	1873 aa		11.45	□□□□□ -0.58
NCSTN-209	ENST00000459963	SRGN	P10124	158 aa		11.45	□□□□□ -0.58
NCSTN-209	ENST00000459963	CCDC24	Q8N4L8	307 aa		11.45	□□□□□ -0.58
NCSTN-209	ENST00000459963	JDP2	Q8WYK2	163 aa		11.45	□□□□□ -0.58
NCSTN-209	ENST00000459963	MASTL	Q96GX5	879 aa		11.45	□□□□□ -0.58
NCSTN-209	ENST00000459963	ADARB2	Q9NS39	739 aa	Known RBP	11.45	□□□□□ -0.58
NCSTN-209	ENST00000459963	BRCA2	P51587	3418 aa		11.45	□□□□□ -0.58
NCSTN-209	ENST00000459963	PRR5L	Q6MZQ0	368 aa		11.44	□□□□□ -0.58
NCSTN-209	ENST00000459963	RTKN2	Q8IZC4	609 aa		11.44	□□□□□ -0.58
NCSTN-209	ENST00000459963	SLC12A5	Q9H2X9	1139 aa		11.44	□□□□□ -0.58
NCSTN-209	ENST00000459963	PGAP2	Q9UHJ9	254 aa		11.44	□□□□□ -0.58
NCSTN-209	ENST00000459963	NCAPD2	Q15021	1401 aa		11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	TJP1	Q07157	1748 aa		11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	COL15A1	P39059	1388 aa		11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	CHRM1	P11229	460 aa	Predicted RBP	11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	EN2	P19622	333 aa	Predicted RBP	11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	ZNF157	P51786	506 aa	Predicted RBP	11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	IER5L	Q5T953	404 aa		11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	CDC37L1	Q7L3B6	337 aa		11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	TERF2IP	Q9NYB0	399 aa		11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	PAPPA2	Q9BXP8	1791 aa		11.43	□□□□□ -0.58
NCSTN-209	ENST00000459963	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.42	□□□□□ -0.58
NCSTN-209	ENST00000459963	COL9A1	P20849	921 aa		11.42	□□□□□ -0.58
NCSTN-209	ENST00000459963	TONSL	Q96HA7	1378 aa		11.41	□□□□□ -0.58
NCSTN-209	ENST00000459963	SLC10A3	P09131	477 aa		11.41	□□□□□ -0.58
NCSTN-209	ENST00000459963	GOLGA2	Q08379	1002 aa		11.41	□□□□□ -0.58
NCSTN-209	ENST00000459963	OLFM4	Q6UX06	510 aa		11.41	□□□□□ -0.58
NCSTN-209	ENST00000459963	FLT4	P35916	1363 aa		11.41	□□□□□ -0.58
NCSTN-209	ENST00000459963	RANBP2	P49792	3224 aa	Known RBP	11.4	□□□□□ -0.58
NCSTN-209	ENST00000459963	TBC1D8	O95759	1140 aa		11.4	□□□□□ -0.58
NCSTN-209	ENST00000459963	CABP4	P57796	275 aa		11.4	□□□□□ -0.58
NCSTN-209	ENST00000459963	TBC1D9B	Q66K14	1250 aa		11.4	□□□□□ -0.58
NCSTN-209	ENST00000459963	ZC3H15	Q8WU90	426 aa	Known RBP	11.4	□□□□□ -0.58
NCSTN-209	ENST00000459963	GPRC5D	Q9NZD1	345 aa		11.4	□□□□□ -0.58
NCSTN-209	ENST00000459963	HTT	P42858	3142 aa		11.39	□□□□□ -0.59
NCSTN-209	ENST00000459963	GPR25	O00155	361 aa		11.39	□□□□□ -0.59
NCSTN-209	ENST00000459963	CENPF	P49454	3210 aa		11.39	□□□□□ -0.59
NCSTN-209	ENST00000459963	NOM1	Q5C9Z4	860 aa	Known RBP	11.39	□□□□□ -0.59
NCSTN-209	ENST00000459963	MAMSTR	Q6ZN01	415 aa		11.39	□□□□□ -0.59
NCSTN-209	ENST00000459963	C2orf69	Q8N8R5	385 aa		11.39	□□□□□ -0.59
NCSTN-209	ENST00000459963	GBA2	Q9HCG7	927 aa	Predicted RBP	11.39	□□□□□ -0.59
NCSTN-209	ENST00000459963	COL4A5	P29400	1685 aa		11.39	□□□□□ -0.59
NCSTN-209	ENST00000459963	POTEB2	H3BUK9	544 aa		11.38	□□□□□ -0.59
NCSTN-209	ENST00000459963	HSP90AB1	P08238	724 aa	Known RBP	11.38	□□□□□ -0.59
NCSTN-209	ENST00000459963	DNAJC10	Q8IXB1	793 aa		11.38	□□□□□ -0.59
NCSTN-209	ENST00000459963	CNBD1	Q8NA66	436 aa		11.38	□□□□□ -0.59
NCSTN-209	ENST00000459963	PSMD1	Q99460	953 aa		11.38	□□□□□ -0.59
NCSTN-209	ENST00000459963	VCAN	P13611	3396 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	NPHP1	O15259	732 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	PLCG2	P16885	1265 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	PLA2G5	P39877	138 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	ST5	P78524	1137 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	USP48	Q86UV5	1035 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	PRO3102	Q9H379	93 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	SCUBE2	Q9NQ36	999 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	ZBTB1	Q9Y2K1	713 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	STXBP5L	Q9Y2K9	1186 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	KIF24	Q5T7B8	1368 aa		11.37	□□□□□ -0.59
NCSTN-209	ENST00000459963	SOX1	O00570	391 aa	Predicted RBP	11.36	□□□□□ -0.59
NCSTN-209	ENST00000459963	FKTN	O75072	461 aa		11.36	□□□□□ -0.59
NCSTN-209	ENST00000459963	CYP19A1	P11511	503 aa	Predicted RBP	11.36	□□□□□ -0.59
NCSTN-209	ENST00000459963	NPR1	P16066	1061 aa		11.36	□□□□□ -0.59
NCSTN-209	ENST00000459963	HIRA	P54198	1017 aa	Predicted RBP	11.36	□□□□□ -0.59
NCSTN-209	ENST00000459963	DLK2	Q6UY11	383 aa		11.36	□□□□□ -0.59
NCSTN-209	ENST00000459963	LRCH3	Q96II8	777 aa		11.36	□□□□□ -0.59
NCSTN-209	ENST00000459963	PSEN1	P49768	467 aa		11.35	□□□□□ -0.59
NCSTN-209	ENST00000459963	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.35	□□□□□ -0.59
NCSTN-209	ENST00000459963	ERBB4	Q15303	1308 aa		11.35	□□□□□ -0.59
NCSTN-209	ENST00000459963	PDAP1	Q13442	181 aa	Known RBP	11.34	□□□□□ -0.59
NCSTN-209	ENST00000459963	ANKRD13D	Q6ZTN6	518 aa		11.34	□□□□□ -0.59
NCSTN-209	ENST00000459963	LARGE2	Q8N3Y3	721 aa		11.34	□□□□□ -0.59
NCSTN-209	ENST00000459963	SNED1	Q8TER0	1413 aa		11.34	□□□□□ -0.59
NCSTN-209	ENST00000459963		A0A1W2PPC1	479 aa		11.33	□□□□□ -0.6
NCSTN-209	ENST00000459963	RASAL3	Q86YV0	1011 aa		11.33	□□□□□ -0.6
NCSTN-209	ENST00000459963	NFATC2IP	Q8NCF5	419 aa		11.33	□□□□□ -0.6
NCSTN-209	ENST00000459963	ARMC5	Q96C12	935 aa		11.33	□□□□□ -0.6

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