RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 HSPA1AP0DMV8 641 aaKnown RBP23.16■■□□□ 1.3
CCDC144B-204ENST00000455629 HSPA1BP0DMV9 641 aaKnown RBP23.16■■□□□ 1.3
CCDC144B-204ENST00000455629 DDX10Q13206 875 aaKnown RBP23.16■■□□□ 1.3
CCDC144B-204ENST00000455629 GIGYF2Q6Y7W6 1299 aaKnown RBP23.16■■□□□ 1.3
CCDC144B-204ENST00000455629 BABAM1Q9NWV8 329 aa23.16■■□□□ 1.3
CCDC144B-204ENST00000455629 RALBP1Q15311 655 aa23.15■■□□□ 1.3
CCDC144B-204ENST00000455629 SUSD4Q5VX71 490 aa23.15■■□□□ 1.3
CCDC144B-204ENST00000455629 GPC2Q8N158 579 aa23.15■■□□□ 1.3
CCDC144B-204ENST00000455629 JDP2Q8WYK2 163 aa23.15■■□□□ 1.3
CCDC144B-204ENST00000455629 RIPK4P57078 832 aa23.14■■□□□ 1.29
CCDC144B-204ENST00000455629 PARP10Q53GL7 1025 aa23.14■■□□□ 1.29
CCDC144B-204ENST00000455629 PPP1R42Q7Z4L9 355 aa23.14■■□□□ 1.29
CCDC144B-204ENST00000455629 PNMA8AQ86V59 439 aaPredicted RBP23.14■■□□□ 1.29
CCDC144B-204ENST00000455629 RBM17Q96I25 401 aaKnown RBP23.14■■□□□ 1.29
CCDC144B-204ENST00000455629 CRAMP1Q96RY5 1269 aa23.14■■□□□ 1.29
CCDC144B-204ENST00000455629 NTSR2O95665 410 aa23.13■■□□□ 1.29
CCDC144B-204ENST00000455629 EPHX2P34913 555 aa23.13■■□□□ 1.29
CCDC144B-204ENST00000455629 LMOD3Q0VAK6 560 aa23.13■■□□□ 1.29
CCDC144B-204ENST00000455629 EAPPQ56P03 285 aaPredicted RBP23.13■■□□□ 1.29
CCDC144B-204ENST00000455629 ADAMTSL1Q8N6G6 1762 aa23.12■■□□□ 1.29
CCDC144B-204ENST00000455629 TNS4Q8IZW8 715 aa23.12■■□□□ 1.29
CCDC144B-204ENST00000455629 MKRN1Q9UHC7 482 aaKnown RBP23.12■■□□□ 1.29
CCDC144B-204ENST00000455629 ITGBL1O95965 494 aaPredicted RBP23.11■■□□□ 1.29
CCDC144B-204ENST00000455629 PDIA6Q15084 440 aa23.11■■□□□ 1.29
CCDC144B-204ENST00000455629 LRP10Q7Z4F1 713 aa23.11■■□□□ 1.29
CCDC144B-204ENST00000455629 RNF123Q5XPI4 1314 aa23.1■■□□□ 1.29
CCDC144B-204ENST00000455629 EIF2S2P20042 333 aaKnown RBP23.1■■□□□ 1.29
CCDC144B-204ENST00000455629 EIF6P56537 245 aaKnown RBP23.1■■□□□ 1.29
CCDC144B-204ENST00000455629 NLRP3Q96P20 1036 aa23.1■■□□□ 1.29
CCDC144B-204ENST00000455629 CLEC11AQ9Y240 323 aa23.1■■□□□ 1.29
CCDC144B-204ENST00000455629 CNTNAP1P78357 1384 aa23.1■■□□□ 1.29
CCDC144B-204ENST00000455629 TMEM88BA6NKF7 163 aa23.09■■□□□ 1.29
CCDC144B-204ENST00000455629 PPEF1O14829 653 aaPredicted RBP23.09■■□□□ 1.29
CCDC144B-204ENST00000455629 TMPOP42166 694 aaKnown RBP23.09■■□□□ 1.29
CCDC144B-204ENST00000455629 SLC10A5Q5PT55 438 aa23.08■■□□□ 1.29
CCDC144B-204ENST00000455629 UTP14AQ9BVJ6 771 aaKnown RBP23.08■■□□□ 1.29
CCDC144B-204ENST00000455629 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
CCDC144B-204ENST00000455629 COL4A5P29400 1685 aa23.07■■□□□ 1.28
CCDC144B-204ENST00000455629 C3orf67Q6ZVT6 689 aa23.07■■□□□ 1.28
CCDC144B-204ENST00000455629 LARGE2Q8N3Y3 721 aa23.07■■□□□ 1.28
CCDC144B-204ENST00000455629 PROSER3Q2NL68 480 aa23.06■■□□□ 1.28
CCDC144B-204ENST00000455629 HSP90AB3PQ58FF7 597 aa23.06■■□□□ 1.28
CCDC144B-204ENST00000455629 ANKRD36CQ5JPF3 1778 aa23.06■■□□□ 1.28
CCDC144B-204ENST00000455629 LMOD1P29536 600 aaPredicted RBP23.05■■□□□ 1.28
CCDC144B-204ENST00000455629 CNTROBQ8N137 903 aa23.05■■□□□ 1.28
CCDC144B-204ENST00000455629 VPS33BQ9H267 617 aa23.05■■□□□ 1.28
CCDC144B-204ENST00000455629 ATP6V0A2Q9Y487 856 aa23.05■■□□□ 1.28
CCDC144B-204ENST00000455629 GJA3Q9Y6H8 435 aa23.05■■□□□ 1.28
CCDC144B-204ENST00000455629 ANXA1P04083 346 aa23.04■■□□□ 1.28
CCDC144B-204ENST00000455629 MAP1SQ66K74 1059 aaPredicted RBP23.04■■□□□ 1.28
CCDC144B-204ENST00000455629 MYBBP1AQ9BQG0 1328 aaKnown RBP23.04■■□□□ 1.28
CCDC144B-204ENST00000455629 TCERG1O14776 1098 aaKnown RBP23.03■■□□□ 1.28
CCDC144B-204ENST00000455629 COPS6Q7L5N1 327 aa23.03■■□□□ 1.28
CCDC144B-204ENST00000455629 NIM1KQ8IY84 436 aa23.03■■□□□ 1.28
CCDC144B-204ENST00000455629 CHL1O00533 1208 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 PPIP5K2O43314 1243 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 BBOX1O75936 387 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 VEGFBP49765 207 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 SCNN1DP51172 638 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 NLRP10Q86W26 655 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 SUPT20HQ8NEM7 779 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 XAGE3Q8WTP9 111 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 DDX21Q9NR30 783 aaKnown RBP eCLIP23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 LTBP1Q14766 1721 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 ABCC4O15439 1325 aa23.01■■□□□ 1.27
CCDC144B-204ENST00000455629 LAMB2P55268 1798 aa23■■□□□ 1.27
CCDC144B-204ENST00000455629 AIMP1Q12904 312 aaKnown RBP23■■□□□ 1.27
CCDC144B-204ENST00000455629 TCIRG1Q13488 830 aa23■■□□□ 1.27
CCDC144B-204ENST00000455629 SLC51AQ86UW1 340 aa23■■□□□ 1.27
CCDC144B-204ENST00000455629 NECTIN2Q92692 538 aa23■■□□□ 1.27
CCDC144B-204ENST00000455629 RASSF10A6NK89 507 aa22.99■■□□□ 1.27
CCDC144B-204ENST00000455629 CAPN15O75808 1086 aa22.99■■□□□ 1.27
CCDC144B-204ENST00000455629 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
CCDC144B-204ENST00000455629 USP50Q70EL3 339 aaPredicted RBP22.99■■□□□ 1.27
CCDC144B-204ENST00000455629 CCDC146Q8IYE0 955 aa22.99■■□□□ 1.27
CCDC144B-204ENST00000455629 RUNDC1Q96C34 613 aa22.99■■□□□ 1.27
CCDC144B-204ENST00000455629 RTFDC1Q9BY42 306 aaPredicted RBP22.99■■□□□ 1.27
CCDC144B-204ENST00000455629 EPS15P42566 896 aa22.98■■□□□ 1.27
CCDC144B-204ENST00000455629 AOC3Q16853 763 aa22.98■■□□□ 1.27
CCDC144B-204ENST00000455629 SP8Q8IXZ3 490 aa22.98■■□□□ 1.27
CCDC144B-204ENST00000455629 TRMT112Q9UI30 125 aaKnown RBP22.98■■□□□ 1.27
CCDC144B-204ENST00000455629 SH3TC1Q8TE82 1336 aa22.98■■□□□ 1.27
CCDC144B-204ENST00000455629 FOXN1O15353 648 aa22.97■■□□□ 1.27
CCDC144B-204ENST00000455629 HOXB7P09629 217 aa22.97■■□□□ 1.27
CCDC144B-204ENST00000455629 WDR43Q15061 677 aaKnown RBP eCLIP22.97■■□□□ 1.27
CCDC144B-204ENST00000455629 DEFB115Q30KQ5 88 aa22.97■■□□□ 1.27
CCDC144B-204ENST00000455629 DDX46Q7L014 1031 aaKnown RBP22.97■■□□□ 1.27
CCDC144B-204ENST00000455629 AIDAQ96BJ3 306 aa22.97■■□□□ 1.27
CCDC144B-204ENST00000455629 ZNRF3Q9ULT6 936 aa22.97■■□□□ 1.27
CCDC144B-204ENST00000455629 TRIM35Q9UPQ4 493 aa22.97■■□□□ 1.27
CCDC144B-204ENST00000455629 HCLS1P14317 486 aaPredicted RBP22.96■■□□□ 1.27
CCDC144B-204ENST00000455629 DPP8Q6V1X1 898 aaPredicted RBP22.96■■□□□ 1.27
CCDC144B-204ENST00000455629 PRDM10Q9NQV6 1147 aa22.96■■□□□ 1.27
CCDC144B-204ENST00000455629 KRT24Q2M2I5 525 aa22.95■■□□□ 1.26
CCDC144B-204ENST00000455629 MPNDQ8N594 471 aa22.95■■□□□ 1.26
CCDC144B-204ENST00000455629 CHPF2Q9P2E5 772 aa22.95■■□□□ 1.26
CCDC144B-204ENST00000455629 ABT1Q9ULW3 272 aaKnown RBP22.95■■□□□ 1.26
CCDC144B-204ENST00000455629 LAS1LQ9Y4W2 734 aaKnown RBP22.95■■□□□ 1.26
CCDC144B-204ENST00000455629 CTCFP49711 727 aaPredicted RBP22.94■■□□□ 1.26
CCDC144B-204ENST00000455629 CXCL9Q07325 125 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms