RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 TBC1D8O95759 1140 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 PDCP20941 246 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 SYT1P21579 422 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 MTHFSP49914 203 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 ETF1P62495 437 aaKnown RBP9.79□□□□□ -0.84
SMCO1-202ENST00000452776 TUBB2AQ13885 445 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 ZKSCAN8Q15776 578 aaPredicted RBP9.79□□□□□ -0.84
SMCO1-202ENST00000452776 FMNL3Q8IVF7 1028 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 GIMAP7Q8NHV1 300 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 RABGGTAQ92696 567 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 ESYT1Q9BSJ8 1104 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 TUBB2BQ9BVA1 445 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 CLSTN2Q9H4D0 955 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 NUP153P49790 1475 aaKnown RBP9.78□□□□□ -0.84
SMCO1-202ENST00000452776 SRGAP3O43295 1099 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 FIBPO43427 364 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 MNAT1P51948 309 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 IRX1P78414 480 aaPredicted RBP9.78□□□□□ -0.84
SMCO1-202ENST00000452776 MLECQ14165 292 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 HDXQ7Z353 690 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 NBPF11Q86T75 865 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 FCHSD1Q86WN1 690 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 MRPL50Q8N5N7 158 aaKnown RBP9.78□□□□□ -0.84
SMCO1-202ENST00000452776 ERCC4Q92889 916 aaPredicted RBP9.78□□□□□ -0.84
SMCO1-202ENST00000452776 DCBLD2Q96PD2 775 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 MPHOSPH8Q99549 860 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 NAT10Q9H0A0 1025 aaKnown RBP9.78□□□□□ -0.84
SMCO1-202ENST00000452776 GBP3Q9H0R5 595 aa9.78□□□□□ -0.84
SMCO1-202ENST00000452776 SH2B1Q9NRF2 756 aaPredicted RBP9.78□□□□□ -0.84
SMCO1-202ENST00000452776 ERBB3P21860 1342 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 NPHP3Q7Z494 1330 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 TTC21BQ7Z4L5 1316 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 CCDC189A1A4V9 331 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 NPHP1O15259 732 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 TADA3O75528 432 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 CCZ1BP86790 482 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 CCZ1P86791 482 aaPredicted RBP9.77□□□□□ -0.84
SMCO1-202ENST00000452776 SART3Q15020 963 aaKnown RBP9.77□□□□□ -0.84
SMCO1-202ENST00000452776 NBPF9Q3BBW0 867 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 HSP90B2PQ58FF3 399 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 TICAM2Q86XR7 235 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 JMYQ8N9B5 988 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 OTUD5Q96G74 571 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 TRIM35Q9UPQ4 493 aa9.77□□□□□ -0.84
SMCO1-202ENST00000452776 RAPGEF6Q8TEU7 1601 aa9.77□□□□□ -0.85
SMCO1-202ENST00000452776 A6NNZ2 444 aa9.77□□□□□ -0.85
SMCO1-202ENST00000452776 BECN2A8MW95 431 aa9.77□□□□□ -0.85
SMCO1-202ENST00000452776 MAP2K7O14733 419 aa9.77□□□□□ -0.85
SMCO1-202ENST00000452776 ZSCAN12O43309 604 aa9.77□□□□□ -0.85
SMCO1-202ENST00000452776 TSGA10IPQ3SY00 556 aa9.77□□□□□ -0.85
SMCO1-202ENST00000452776 TUBB8Q3ZCM7 444 aa9.77□□□□□ -0.85
SMCO1-202ENST00000452776 HOMER1Q86YM7 354 aa9.77□□□□□ -0.85
SMCO1-202ENST00000452776 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.85
SMCO1-202ENST00000452776 KIAA1210Q9ULL0 1709 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 ERLIN2O94905 339 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 DDR1Q08345 913 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 SF3B2Q13435 895 aaKnown RBP9.76□□□□□ -0.85
SMCO1-202ENST00000452776 C11orf91Q3C1V1 193 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 CCDC144BQ3MJ40 725 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 CCDC144CPQ8IYA2 1237 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 PLEKHF1Q96S99 279 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 FUT8Q9BYC5 575 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 TRMT1Q9NXH9 659 aaKnown RBP9.76□□□□□ -0.85
SMCO1-202ENST00000452776 MYO5CQ9NQX4 1742 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 PPRC1Q5VV67 1664 aaKnown RBP9.76□□□□□ -0.85
SMCO1-202ENST00000452776 UNC13BO14795 1591 aa9.76□□□□□ -0.85
SMCO1-202ENST00000452776 H0YHG0 523 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 SARNPP82979 210 aaKnown RBP9.75□□□□□ -0.85
SMCO1-202ENST00000452776 PSME1Q06323 249 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 STX1AQ16623 288 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 FOXD4L6Q3SYB3 417 aaPredicted RBP9.75□□□□□ -0.85
SMCO1-202ENST00000452776 NBPF10Q6P3W6 841 aaKnown RBP9.75□□□□□ -0.85
SMCO1-202ENST00000452776 FOXD4L3Q6VB84 417 aaPredicted RBP9.75□□□□□ -0.85
SMCO1-202ENST00000452776 GBP6Q6ZN66 633 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 FAM71BQ8TC56 605 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 PPP1R13BQ96KQ4 1090 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 ZCCHC17Q9NP64 241 aaKnown RBP9.75□□□□□ -0.85
SMCO1-202ENST00000452776 TRAK1Q9UPV9 953 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 EXOC6BQ9Y2D4 811 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 USP32Q8NFA0 1604 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 MADDQ8WXG6 1647 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 USP27XA6NNY8 438 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 RDXP35241 583 aaKnown RBP9.75□□□□□ -0.85
SMCO1-202ENST00000452776 EVCP57679 992 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 APOBRQ0VD83 1088 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 NEDD9Q14511 834 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 CHADLQ6NUI6 762 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 SPATS2Q86XZ4 545 aaKnown RBP9.75□□□□□ -0.85
SMCO1-202ENST00000452776 MICALL1Q8N3F8 863 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 GOLGA1Q92805 767 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 FAM210AQ96ND0 272 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 GNL3LQ9NVN8 582 aaKnown RBP9.75□□□□□ -0.85
SMCO1-202ENST00000452776 ANO10Q9NW15 660 aa9.75□□□□□ -0.85
SMCO1-202ENST00000452776 PRG4Q92954 1404 aaPredicted RBP9.75□□□□□ -0.85
SMCO1-202ENST00000452776 KLHL33A6NCF5 533 aa9.74□□□□□ -0.85
SMCO1-202ENST00000452776 PLEKHD1A6NEE1 506 aa9.74□□□□□ -0.85
SMCO1-202ENST00000452776 VAMP4O75379 141 aa9.74□□□□□ -0.85
SMCO1-202ENST00000452776 GIGYF1O75420 1035 aaPredicted RBP9.74□□□□□ -0.85
SMCO1-202ENST00000452776 CD44P16070 742 aaKnown RBP9.74□□□□□ -0.85
SMCO1-202ENST00000452776 SFPQP23246 707 aaKnown RBP eCLIP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms