RNA–Protein interactions for RNA: ENST00000450844.1

GPATCH3-203, Transcript of G-patch domain containing 3, humanhuman

TSL 2

Gene GPATCH3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-203ENST00000450844 ERBB4Q15303 1308 aa22.7■■□□□ 1.22
GPATCH3-203ENST00000450844 IQCA1LA6NCM1 817 aa22.69■■□□□ 1.22
GPATCH3-203ENST00000450844 FZD9O00144 591 aa22.69■■□□□ 1.22
GPATCH3-203ENST00000450844 HSPA1AP0DMV8 641 aaKnown RBP22.69■■□□□ 1.22
GPATCH3-203ENST00000450844 HSPA1BP0DMV9 641 aaKnown RBP22.69■■□□□ 1.22
GPATCH3-203ENST00000450844 PROSER3Q2NL68 480 aa22.69■■□□□ 1.22
GPATCH3-203ENST00000450844 PSMD1Q99460 953 aa22.69■■□□□ 1.22
GPATCH3-203ENST00000450844 CREBZFQ9NS37 354 aa22.69■■□□□ 1.22
GPATCH3-203ENST00000450844 GIGYF2Q6Y7W6 1299 aaKnown RBP22.68■■□□□ 1.22
GPATCH3-203ENST00000450844 LDHDQ86WU2 507 aa22.68■■□□□ 1.22
GPATCH3-203ENST00000450844 TSPYL4Q9UJ04 414 aa22.68■■□□□ 1.22
GPATCH3-203ENST00000450844 RNF123Q5XPI4 1314 aa22.66■■□□□ 1.22
GPATCH3-203ENST00000450844 ZNF316A6NFI3 1004 aaPredicted RBP22.66■■□□□ 1.22
GPATCH3-203ENST00000450844 ITGBL1O95965 494 aaPredicted RBP22.66■■□□□ 1.22
GPATCH3-203ENST00000450844 ANXA1P04083 346 aa22.66■■□□□ 1.22
GPATCH3-203ENST00000450844 RIPK4P57078 832 aa22.66■■□□□ 1.22
GPATCH3-203ENST00000450844 PNNQ9H307 717 aaKnown RBP22.66■■□□□ 1.22
GPATCH3-203ENST00000450844 MKRN1Q9UHC7 482 aaKnown RBP22.66■■□□□ 1.22
GPATCH3-203ENST00000450844 HACL1Q9UJ83 578 aa22.65■■□□□ 1.22
GPATCH3-203ENST00000450844 EPHX2P34913 555 aa22.64■■□□□ 1.21
GPATCH3-203ENST00000450844 TMPOP42166 694 aaKnown RBP22.64■■□□□ 1.21
GPATCH3-203ENST00000450844 RPGRQ92834 1020 aaKnown RBP22.64■■□□□ 1.21
GPATCH3-203ENST00000450844 CNTNAP1P78357 1384 aa22.63■■□□□ 1.21
GPATCH3-203ENST00000450844 EIF2S2P20042 333 aaKnown RBP22.63■■□□□ 1.21
GPATCH3-203ENST00000450844 EAPPQ56P03 285 aaPredicted RBP22.63■■□□□ 1.21
GPATCH3-203ENST00000450844 CC2D2BQ6DHV5 1058 aa22.63■■□□□ 1.21
GPATCH3-203ENST00000450844 CRAMP1Q96RY5 1269 aa22.63■■□□□ 1.21
GPATCH3-203ENST00000450844 PPEF1O14829 653 aaPredicted RBP22.62■■□□□ 1.21
GPATCH3-203ENST00000450844 GPC2Q8N158 579 aa22.62■■□□□ 1.21
GPATCH3-203ENST00000450844 MYBBP1AQ9BQG0 1328 aaKnown RBP22.61■■□□□ 1.21
GPATCH3-203ENST00000450844 KRT24Q2M2I5 525 aa22.61■■□□□ 1.21
GPATCH3-203ENST00000450844 PARP10Q53GL7 1025 aa22.61■■□□□ 1.21
GPATCH3-203ENST00000450844 BABAM1Q9NWV8 329 aa22.61■■□□□ 1.21
GPATCH3-203ENST00000450844 TAF1P21675 1872 aa22.6■■□□□ 1.21
GPATCH3-203ENST00000450844 TCERG1O14776 1098 aaKnown RBP22.6■■□□□ 1.21
GPATCH3-203ENST00000450844 RBM17Q96I25 401 aaKnown RBP22.6■■□□□ 1.21
GPATCH3-203ENST00000450844 SLC10A5Q5PT55 438 aa22.59■■□□□ 1.21
GPATCH3-203ENST00000450844 PPP1R42Q7Z4L9 355 aa22.59■■□□□ 1.21
GPATCH3-203ENST00000450844 CCDC146Q8IYE0 955 aa22.59■■□□□ 1.21
GPATCH3-203ENST00000450844 TNS4Q8IZW8 715 aa22.59■■□□□ 1.21
GPATCH3-203ENST00000450844 JDP2Q8WYK2 163 aa22.59■■□□□ 1.21
GPATCH3-203ENST00000450844 NECTIN2Q92692 538 aa22.59■■□□□ 1.21
GPATCH3-203ENST00000450844 DDX60Q8IY21 1712 aaKnown RBP22.59■■□□□ 1.21
GPATCH3-203ENST00000450844 ABCC4O15439 1325 aa22.58■■□□□ 1.21
GPATCH3-203ENST00000450844 SCNN1DP51172 638 aa22.58■■□□□ 1.21
GPATCH3-203ENST00000450844 MAP1SQ66K74 1059 aaPredicted RBP22.58■■□□□ 1.21
GPATCH3-203ENST00000450844 COPS6Q7L5N1 327 aa22.57■■□□□ 1.2
GPATCH3-203ENST00000450844 PNMA8AQ86V59 439 aaPredicted RBP22.57■■□□□ 1.2
GPATCH3-203ENST00000450844 XAGE3Q8WTP9 111 aa22.57■■□□□ 1.2
GPATCH3-203ENST00000450844 UTP14AQ9BVJ6 771 aaKnown RBP22.57■■□□□ 1.2
GPATCH3-203ENST00000450844 TRIM35Q9UPQ4 493 aa22.57■■□□□ 1.2
GPATCH3-203ENST00000450844 LRRC37AA6NMS7 1700 aa22.57■■□□□ 1.2
GPATCH3-203ENST00000450844 COL4A1P02462 1669 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 DUOX1Q9NRD9 1551 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 TMEM88BA6NKF7 163 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 LMOD3Q0VAK6 560 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 GRIPAP1Q4V328 841 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 NLRP10Q86W26 655 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 LARGE2Q8N3Y3 721 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 NLRP3Q96P20 1036 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 CLEC11AQ9Y240 323 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 ATP6V0A2Q9Y487 856 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 GJA3Q9Y6H8 435 aa22.56■■□□□ 1.2
GPATCH3-203ENST00000450844 CHL1O00533 1208 aa22.55■■□□□ 1.2
GPATCH3-203ENST00000450844 EIF6P56537 245 aaKnown RBP22.55■■□□□ 1.2
GPATCH3-203ENST00000450844 CNTROBQ8N137 903 aa22.55■■□□□ 1.2
GPATCH3-203ENST00000450844 PRKRIP1Q9H875 184 aaPredicted RBP22.55■■□□□ 1.2
GPATCH3-203ENST00000450844 EPS15P42566 896 aa22.54■■□□□ 1.2
GPATCH3-203ENST00000450844 VEGFBP49765 207 aa22.54■■□□□ 1.2
GPATCH3-203ENST00000450844 AIMP1Q12904 312 aaKnown RBP22.54■■□□□ 1.2
GPATCH3-203ENST00000450844 NEUROD2Q15784 382 aa22.54■■□□□ 1.2
GPATCH3-203ENST00000450844 THSD7BQ9C0I4 1608 aa22.53■■□□□ 1.2
GPATCH3-203ENST00000450844 CAPN15O75808 1086 aa22.53■■□□□ 1.2
GPATCH3-203ENST00000450844 HCLS1P14317 486 aaPredicted RBP22.53■■□□□ 1.2
GPATCH3-203ENST00000450844 AOC3Q16853 763 aa22.53■■□□□ 1.2
GPATCH3-203ENST00000450844 DDX21Q9NR30 783 aaKnown RBP eCLIP22.53■■□□□ 1.2
GPATCH3-203ENST00000450844 FOXN1O15353 648 aa22.52■■□□□ 1.2
GPATCH3-203ENST00000450844 PPIP5K2O43314 1243 aa22.52■■□□□ 1.2
GPATCH3-203ENST00000450844 FMR1Q06787 632 aaKnown RBP eCLIP22.52■■□□□ 1.2
GPATCH3-203ENST00000450844 RTFDC1Q9BY42 306 aaPredicted RBP22.52■■□□□ 1.2
GPATCH3-203ENST00000450844 CHPF2Q9P2E5 772 aa22.52■■□□□ 1.2
GPATCH3-203ENST00000450844 TRPM7Q96QT4 1865 aa22.51■■□□□ 1.19
GPATCH3-203ENST00000450844 RASSF10A6NK89 507 aa22.51■■□□□ 1.19
GPATCH3-203ENST00000450844 TCIRG1Q13488 830 aa22.51■■□□□ 1.19
GPATCH3-203ENST00000450844 NIM1KQ8IY84 436 aa22.51■■□□□ 1.19
GPATCH3-203ENST00000450844 ZNF428Q96B54 188 aa22.51■■□□□ 1.19
GPATCH3-203ENST00000450844 RUNDC1Q96C34 613 aa22.51■■□□□ 1.19
GPATCH3-203ENST00000450844 HSP90AB3PQ58FF7 597 aa22.5■■□□□ 1.19
GPATCH3-203ENST00000450844 LMOD1P29536 600 aaPredicted RBP22.49■■□□□ 1.19
GPATCH3-203ENST00000450844 WDR43Q15061 677 aaKnown RBP eCLIP22.48■■□□□ 1.19
GPATCH3-203ENST00000450844 SP8Q8IXZ3 490 aa22.48■■□□□ 1.19
GPATCH3-203ENST00000450844 TRMT112Q9UI30 125 aaKnown RBP22.48■■□□□ 1.19
GPATCH3-203ENST00000450844 ADAMTS8Q9UP79 889 aa22.48■■□□□ 1.19
GPATCH3-203ENST00000450844 LAS1LQ9Y4W2 734 aaKnown RBP22.48■■□□□ 1.19
GPATCH3-203ENST00000450844 SH3TC1Q8TE82 1336 aa22.48■■□□□ 1.19
GPATCH3-203ENST00000450844 CXCL9Q07325 125 aa22.47■■□□□ 1.19
GPATCH3-203ENST00000450844 VPS33BQ9H267 617 aa22.47■■□□□ 1.19
GPATCH3-203ENST00000450844 BBOX1O75936 387 aa22.46■■□□□ 1.19
GPATCH3-203ENST00000450844 GRAPQ13588 217 aa22.46■■□□□ 1.19
GPATCH3-203ENST00000450844 HDGFL1Q5TGJ6 251 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms