RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 RIC1Q4ADV7 1423 aa19.87■□□□□ 0.77
CSNK1E-208ENST00000431611 FZD9O00144 591 aa19.87■□□□□ 0.77
CSNK1E-208ENST00000431611 PDIA6Q15084 440 aa19.87■□□□□ 0.77
CSNK1E-208ENST00000431611 PARP10Q53GL7 1025 aa19.87■□□□□ 0.77
CSNK1E-208ENST00000431611 EAPPQ56P03 285 aaPredicted RBP19.87■□□□□ 0.77
CSNK1E-208ENST00000431611 LRP10Q7Z4F1 713 aa19.87■□□□□ 0.77
CSNK1E-208ENST00000431611 JDP2Q8WYK2 163 aa19.87■□□□□ 0.77
CSNK1E-208ENST00000431611 RBM17Q96I25 401 aaKnown RBP19.87■□□□□ 0.77
CSNK1E-208ENST00000431611 HSPA1AP0DMV8 641 aaKnown RBP19.86■□□□□ 0.77
CSNK1E-208ENST00000431611 HSPA1BP0DMV9 641 aaKnown RBP19.86■□□□□ 0.77
CSNK1E-208ENST00000431611 GRIPAP1Q4V328 841 aa19.86■□□□□ 0.77
CSNK1E-208ENST00000431611 CRAMP1Q96RY5 1269 aa19.86■□□□□ 0.77
CSNK1E-208ENST00000431611 SNED1Q8TER0 1413 aa19.85■□□□□ 0.77
CSNK1E-208ENST00000431611 EPHX2P34913 555 aa19.85■□□□□ 0.77
CSNK1E-208ENST00000431611 GPC2Q8N158 579 aa19.85■□□□□ 0.77
CSNK1E-208ENST00000431611 NLRP3Q96P20 1036 aa19.85■□□□□ 0.77
CSNK1E-208ENST00000431611 CLEC11AQ9Y240 323 aa19.85■□□□□ 0.77
CSNK1E-208ENST00000431611 TCERG1O14776 1098 aaKnown RBP19.84■□□□□ 0.77
CSNK1E-208ENST00000431611 PPEF1O14829 653 aaPredicted RBP19.84■□□□□ 0.77
CSNK1E-208ENST00000431611 ANXA1P04083 346 aa19.84■□□□□ 0.77
CSNK1E-208ENST00000431611 DDX10Q13206 875 aaKnown RBP19.84■□□□□ 0.77
CSNK1E-208ENST00000431611 PROSER3Q2NL68 480 aa19.84■□□□□ 0.77
CSNK1E-208ENST00000431611 C3orf67Q6ZVT6 689 aa19.84■□□□□ 0.77
CSNK1E-208ENST00000431611 UTP14AQ9BVJ6 771 aaKnown RBP19.84■□□□□ 0.77
CSNK1E-208ENST00000431611 MKRN1Q9UHC7 482 aaKnown RBP19.84■□□□□ 0.77
CSNK1E-208ENST00000431611 NUP98P52948 1817 aa19.83■□□□□ 0.77
CSNK1E-208ENST00000431611 RNF123Q5XPI4 1314 aa19.83■□□□□ 0.77
CSNK1E-208ENST00000431611 PASKQ96RG2 1323 aa19.83■□□□□ 0.77
CSNK1E-208ENST00000431611 MYBBP1AQ9BQG0 1328 aaKnown RBP19.83■□□□□ 0.77
CSNK1E-208ENST00000431611 EIF6P56537 245 aaKnown RBP19.83■□□□□ 0.77
CSNK1E-208ENST00000431611 NEUROD2Q15784 382 aa19.83■□□□□ 0.77
CSNK1E-208ENST00000431611 PNMA8AQ86V59 439 aaPredicted RBP19.83■□□□□ 0.77
CSNK1E-208ENST00000431611 CCDC146Q8IYE0 955 aa19.83■□□□□ 0.77
CSNK1E-208ENST00000431611 NECTIN2Q92692 538 aa19.83■□□□□ 0.77
CSNK1E-208ENST00000431611 ITGBL1O95965 494 aaPredicted RBP19.82■□□□□ 0.76
CSNK1E-208ENST00000431611 AIMP1Q12904 312 aaKnown RBP19.82■□□□□ 0.76
CSNK1E-208ENST00000431611 SLC10A5Q5PT55 438 aa19.82■□□□□ 0.76
CSNK1E-208ENST00000431611 COPS6Q7L5N1 327 aa19.82■□□□□ 0.76
CSNK1E-208ENST00000431611 LARGE2Q8N3Y3 721 aa19.82■□□□□ 0.76
CSNK1E-208ENST00000431611 TMX4Q9H1E5 349 aaPredicted RBP19.82■□□□□ 0.76
CSNK1E-208ENST00000431611 SCN4AP35499 1836 aa19.81■□□□□ 0.76
CSNK1E-208ENST00000431611 HSP90AB3PQ58FF7 597 aa19.81■□□□□ 0.76
CSNK1E-208ENST00000431611 GJA3Q9Y6H8 435 aa19.81■□□□□ 0.76
CSNK1E-208ENST00000431611 SLC51AQ86UW1 340 aa19.8■□□□□ 0.76
CSNK1E-208ENST00000431611 TNS4Q8IZW8 715 aa19.8■□□□□ 0.76
CSNK1E-208ENST00000431611 XAGE3Q8WTP9 111 aa19.8■□□□□ 0.76
CSNK1E-208ENST00000431611 TMEM88BA6NKF7 163 aa19.79■□□□□ 0.76
CSNK1E-208ENST00000431611 CHL1O00533 1208 aa19.79■□□□□ 0.76
CSNK1E-208ENST00000431611 WDR43Q15061 677 aaKnown RBP eCLIP19.79■□□□□ 0.76
CSNK1E-208ENST00000431611 NLRP10Q86W26 655 aa19.79■□□□□ 0.76
CSNK1E-208ENST00000431611 RUNDC1Q96C34 613 aa19.79■□□□□ 0.76
CSNK1E-208ENST00000431611 DDX21Q9NR30 783 aaKnown RBP eCLIP19.79■□□□□ 0.76
CSNK1E-208ENST00000431611 ATP6V0A2Q9Y487 856 aa19.79■□□□□ 0.76
CSNK1E-208ENST00000431611 LAS1LQ9Y4W2 734 aaKnown RBP19.79■□□□□ 0.76
CSNK1E-208ENST00000431611 LMOD1P29536 600 aaPredicted RBP19.78■□□□□ 0.76
CSNK1E-208ENST00000431611 KRT24Q2M2I5 525 aa19.78■□□□□ 0.76
CSNK1E-208ENST00000431611 MAP1SQ66K74 1059 aaPredicted RBP19.78■□□□□ 0.76
CSNK1E-208ENST00000431611 NIM1KQ8IY84 436 aa19.78■□□□□ 0.76
CSNK1E-208ENST00000431611 CNTROBQ8N137 903 aa19.78■□□□□ 0.76
CSNK1E-208ENST00000431611 TRIM35Q9UPQ4 493 aa19.78■□□□□ 0.76
CSNK1E-208ENST00000431611 CNTNAP1P78357 1384 aa19.78■□□□□ 0.76
CSNK1E-208ENST00000431611 PPIP5K2O43314 1243 aa19.77■□□□□ 0.76
CSNK1E-208ENST00000431611 TCIRG1Q13488 830 aa19.77■□□□□ 0.76
CSNK1E-208ENST00000431611 COL4A5P29400 1685 aa19.77■□□□□ 0.76
CSNK1E-208ENST00000431611 ABCC4O15439 1325 aa19.76■□□□□ 0.75
CSNK1E-208ENST00000431611 BBOX1O75936 387 aa19.76■□□□□ 0.75
CSNK1E-208ENST00000431611 HCLS1P14317 486 aaPredicted RBP19.76■□□□□ 0.75
CSNK1E-208ENST00000431611 VPS33BQ9H267 617 aa19.76■□□□□ 0.75
CSNK1E-208ENST00000431611 TRMT112Q9UI30 125 aaKnown RBP19.76■□□□□ 0.75
CSNK1E-208ENST00000431611 SCNN1DP51172 638 aa19.75■□□□□ 0.75
CSNK1E-208ENST00000431611 AOC3Q16853 763 aa19.75■□□□□ 0.75
CSNK1E-208ENST00000431611 SUPT20HQ8NEM7 779 aa19.75■□□□□ 0.75
CSNK1E-208ENST00000431611 CHPF2Q9P2E5 772 aa19.75■□□□□ 0.75
CSNK1E-208ENST00000431611 ADAMTS8Q9UP79 889 aa19.75■□□□□ 0.75
CSNK1E-208ENST00000431611 SH3TC1Q8TE82 1336 aa19.75■□□□□ 0.75
CSNK1E-208ENST00000431611 PCNTO95613 3336 aa19.74■□□□□ 0.75
CSNK1E-208ENST00000431611 EPS15P42566 896 aa19.74■□□□□ 0.75
CSNK1E-208ENST00000431611 HDGFL1Q5TGJ6 251 aa19.74■□□□□ 0.75
CSNK1E-208ENST00000431611 SP8Q8IXZ3 490 aa19.74■□□□□ 0.75
CSNK1E-208ENST00000431611 VEGFBP49765 207 aa19.73■□□□□ 0.75
CSNK1E-208ENST00000431611 DPP8Q6V1X1 898 aaPredicted RBP19.73■□□□□ 0.75
CSNK1E-208ENST00000431611 DDX46Q7L014 1031 aaKnown RBP19.73■□□□□ 0.75
CSNK1E-208ENST00000431611 RTFDC1Q9BY42 306 aaPredicted RBP19.73■□□□□ 0.75
CSNK1E-208ENST00000431611 ADAMTSL1Q8N6G6 1762 aa19.72■□□□□ 0.75
CSNK1E-208ENST00000431611 CAPN15O75808 1086 aa19.72■□□□□ 0.75
CSNK1E-208ENST00000431611 HOXB7P09629 217 aa19.72■□□□□ 0.75
CSNK1E-208ENST00000431611 MPNDQ8N594 471 aa19.72■□□□□ 0.75
CSNK1E-208ENST00000431611 PLBD2Q8NHP8 589 aa19.72■□□□□ 0.75
CSNK1E-208ENST00000431611 DBF4Q9UBU7 674 aaPredicted RBP19.72■□□□□ 0.75
CSNK1E-208ENST00000431611 ZNRF3Q9ULT6 936 aa19.72■□□□□ 0.75
CSNK1E-208ENST00000431611 GRAPQ13588 217 aa19.71■□□□□ 0.75
CSNK1E-208ENST00000431611 ANKRD13DQ6ZTN6 518 aa19.71■□□□□ 0.75
CSNK1E-208ENST00000431611 USP50Q70EL3 339 aaPredicted RBP19.71■□□□□ 0.75
CSNK1E-208ENST00000431611 GRAPLQ8TC17 118 aaPredicted RBP19.71■□□□□ 0.75
CSNK1E-208ENST00000431611 CFAP44Q96MT7 982 aa19.71■□□□□ 0.75
CSNK1E-208ENST00000431611 RASSF10A6NK89 507 aa19.7■□□□□ 0.74
CSNK1E-208ENST00000431611 CXCL9Q07325 125 aa19.7■□□□□ 0.74
CSNK1E-208ENST00000431611 DEFB115Q30KQ5 88 aa19.7■□□□□ 0.74
CSNK1E-208ENST00000431611 ZNF428Q96B54 188 aa19.7■□□□□ 0.74
CSNK1E-208ENST00000431611 FOXN1O15353 648 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms