RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 RXRAP19793 462 aa17.86■□□□□ 0.45
SCAP-206ENST00000428413 ERC1Q8IUD2 1116 aa17.86■□□□□ 0.45
SCAP-206ENST00000428413 HELBQ8NG08 1087 aaPredicted RBP17.85■□□□□ 0.45
SCAP-206ENST00000428413 IQSEC3Q9UPP2 1182 aaPredicted RBP17.85■□□□□ 0.45
SCAP-206ENST00000428413 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
SCAP-206ENST00000428413 IDH1O75874 414 aaKnown RBP17.85■□□□□ 0.45
SCAP-206ENST00000428413 HSP90AA4PQ58FG1 418 aa17.85■□□□□ 0.45
SCAP-206ENST00000428413 SSH3Q8TE77 659 aa17.85■□□□□ 0.45
SCAP-206ENST00000428413 IGSF1Q8N6C5 1336 aa17.85■□□□□ 0.45
SCAP-206ENST00000428413 GIGYF1O75420 1035 aaPredicted RBP17.84■□□□□ 0.45
SCAP-206ENST00000428413 PTCH1Q13635 1447 aa17.84■□□□□ 0.45
SCAP-206ENST00000428413 MYO3AQ8NEV4 1616 aa17.84■□□□□ 0.45
SCAP-206ENST00000428413 ME3Q16798 604 aa17.84■□□□□ 0.45
SCAP-206ENST00000428413 SLC4A8Q2Y0W8 1093 aa17.84■□□□□ 0.45
SCAP-206ENST00000428413 EVI5LQ96CN4 794 aa17.84■□□□□ 0.45
SCAP-206ENST00000428413 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
SCAP-206ENST00000428413 DACT1Q9NYF0 836 aa17.84■□□□□ 0.45
SCAP-206ENST00000428413 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
SCAP-206ENST00000428413 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
SCAP-206ENST00000428413 AATKQ6ZMQ8 1374 aa17.83■□□□□ 0.45
SCAP-206ENST00000428413 F13A1P00488 732 aa17.83■□□□□ 0.45
SCAP-206ENST00000428413 CSPP1Q1MSJ5 1256 aa17.83■□□□□ 0.45
SCAP-206ENST00000428413 AMOTQ4VCS5 1084 aa17.83■□□□□ 0.45
SCAP-206ENST00000428413 ZNF790Q6PG37 636 aa17.83■□□□□ 0.45
SCAP-206ENST00000428413 NFXL1Q6ZNB6 911 aa17.83■□□□□ 0.45
SCAP-206ENST00000428413 PRDM4Q9UKN5 801 aa17.83■□□□□ 0.45
SCAP-206ENST00000428413 PIK3C2BO00750 1634 aa17.83■□□□□ 0.44
SCAP-206ENST00000428413 NUP62CLQ9H1M0 184 aa17.83■□□□□ 0.44
SCAP-206ENST00000428413 TAF6LQ9Y6J9 622 aa17.83■□□□□ 0.44
SCAP-206ENST00000428413 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
SCAP-206ENST00000428413 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.44
SCAP-206ENST00000428413 LUZP1Q86V48 1076 aa17.83■□□□□ 0.44
SCAP-206ENST00000428413 LINS1Q8NG48 757 aa17.83■□□□□ 0.44
SCAP-206ENST00000428413 BRD1O95696 1058 aa17.82■□□□□ 0.44
SCAP-206ENST00000428413 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
SCAP-206ENST00000428413 HSPA4P34932 840 aa17.82■□□□□ 0.44
SCAP-206ENST00000428413 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
SCAP-206ENST00000428413 Q6ZUG5 572 aa17.82■□□□□ 0.44
SCAP-206ENST00000428413 CNNM1Q9NRU3 951 aa17.82■□□□□ 0.44
SCAP-206ENST00000428413 KIAA0232Q92628 1395 aa17.82■□□□□ 0.44
SCAP-206ENST00000428413 IBTKQ9P2D0 1353 aaPredicted RBP17.82■□□□□ 0.44
SCAP-206ENST00000428413 IFIT1P09914 478 aaKnown RBP17.82■□□□□ 0.44
SCAP-206ENST00000428413 ZNF589Q86UQ0 364 aaPredicted RBP17.82■□□□□ 0.44
SCAP-206ENST00000428413 APOBRQ0VD83 1088 aa17.81■□□□□ 0.44
SCAP-206ENST00000428413 CCDC57Q2TAC2 916 aa17.81■□□□□ 0.44
SCAP-206ENST00000428413 CCDC183Q5T5S1 534 aa17.81■□□□□ 0.44
SCAP-206ENST00000428413 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
SCAP-206ENST00000428413 COL9A3Q14050 684 aaPredicted RBP17.81■□□□□ 0.44
SCAP-206ENST00000428413 TTC39AQ5SRH9 613 aa17.81■□□□□ 0.44
SCAP-206ENST00000428413 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
SCAP-206ENST00000428413 CEP126Q9P2H0 1117 aa17.81■□□□□ 0.44
SCAP-206ENST00000428413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.81■□□□□ 0.44
SCAP-206ENST00000428413 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
SCAP-206ENST00000428413 ISY1Q9ULR0 285 aaKnown RBP17.8■□□□□ 0.44
SCAP-206ENST00000428413 CCDC192P0DO97 292 aa17.8■□□□□ 0.44
SCAP-206ENST00000428413 TRMT1Q9NXH9 659 aaKnown RBP17.8■□□□□ 0.44
SCAP-206ENST00000428413 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCAP-206ENST00000428413 ARAP3Q8WWN8 1544 aa17.8■□□□□ 0.44
SCAP-206ENST00000428413 PAXIP1Q6ZW49 1069 aaPredicted RBP17.8■□□□□ 0.44
SCAP-206ENST00000428413 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
SCAP-206ENST00000428413 FTOQ9C0B1 505 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCAP-206ENST00000428413 ATP7BP35670 1465 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 FAM177A1Q8N128 213 aaPredicted RBP17.79■□□□□ 0.44
SCAP-206ENST00000428413 C16orf45Q96MC5 204 aaPredicted RBP17.79■□□□□ 0.44
SCAP-206ENST00000428413 NEK1Q96PY6 1258 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 CPSF1Q10570 1443 aaKnown RBP17.79■□□□□ 0.44
SCAP-206ENST00000428413 CCDC171Q6TFL3 1326 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 RAD50Q92878 1312 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 CCDC73Q6ZRK6 1079 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 PI4K2BQ8TCG2 481 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 IGSF3O75054 1194 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 TTLL5Q6EMB2 1281 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
SCAP-206ENST00000428413 DNAJC25Q9H1X3 360 aa17.78■□□□□ 0.44
SCAP-206ENST00000428413 SETBP1Q9Y6X0 1596 aa17.78■□□□□ 0.44
SCAP-206ENST00000428413 SASH1O94885 1247 aa17.78■□□□□ 0.44
SCAP-206ENST00000428413 ARHGAP31Q2M1Z3 1444 aa17.78■□□□□ 0.44
SCAP-206ENST00000428413 VWDEQ8N2E2 1590 aa17.78■□□□□ 0.44
SCAP-206ENST00000428413 SLC27A2O14975 620 aa17.77■□□□□ 0.44
SCAP-206ENST00000428413 MAP3K11Q16584 847 aa17.77■□□□□ 0.44
SCAP-206ENST00000428413 MAP2P11137 1827 aaKnown RBP17.77■□□□□ 0.44
SCAP-206ENST00000428413 COL3A1P02461 1466 aaPredicted RBP17.77■□□□□ 0.44
SCAP-206ENST00000428413 ATP10DQ9P241 1426 aa17.77■□□□□ 0.44
SCAP-206ENST00000428413 LSG1Q9H089 658 aaKnown RBP17.77■□□□□ 0.44
SCAP-206ENST00000428413 DDX21Q9NR30 783 aaKnown RBP eCLIP17.77■□□□□ 0.44
SCAP-206ENST00000428413 LIG1P18858 919 aa17.77■□□□□ 0.43
SCAP-206ENST00000428413 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.43
SCAP-206ENST00000428413 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.43
SCAP-206ENST00000428413 GOLGA6L6A8MZA4 724 aa17.76■□□□□ 0.43
SCAP-206ENST00000428413 SNRPA1P09661 255 aaKnown RBP17.76■□□□□ 0.43
SCAP-206ENST00000428413 UBE2HP62256 183 aa17.76■□□□□ 0.43
SCAP-206ENST00000428413 NUTM2BA6NNL0 878 aaPredicted RBP17.76■□□□□ 0.43
SCAP-206ENST00000428413 NUTM2EB1AL46 878 aaPredicted RBP17.76■□□□□ 0.43
SCAP-206ENST00000428413 HTATSF1O43719 755 aaKnown RBP17.76■□□□□ 0.43
SCAP-206ENST00000428413 ANAPC15P60006 121 aa17.76■□□□□ 0.43
SCAP-206ENST00000428413 NUTM2AQ8IVF1 878 aaPredicted RBP17.76■□□□□ 0.43
SCAP-206ENST00000428413 PDCP20941 246 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms