RNA–Protein interactions for RNA: ENST00000420666.1

ITSN1-215, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-215ENST00000420666 NTSR2O95665 410 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 ITGBL1O95965 494 aaPredicted RBP19.35■□□□□ 0.69
ITSN1-215ENST00000420666 EPHX2P34913 555 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 PDIA6Q15084 440 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 RALBP1Q15311 655 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 PARP10Q53GL7 1025 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 EAPPQ56P03 285 aaPredicted RBP19.35■□□□□ 0.69
ITSN1-215ENST00000420666 LRP10Q7Z4F1 713 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 PPP1R42Q7Z4L9 355 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 PNMA8AQ86V59 439 aaPredicted RBP19.35■□□□□ 0.69
ITSN1-215ENST00000420666 TNS4Q8IZW8 715 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 GPC2Q8N158 579 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 RBM17Q96I25 401 aaKnown RBP19.35■□□□□ 0.69
ITSN1-215ENST00000420666 EIF2S2P20042 333 aaKnown RBP19.34■□□□□ 0.69
ITSN1-215ENST00000420666 CLEC11AQ9Y240 323 aa19.34■□□□□ 0.69
ITSN1-215ENST00000420666 EIF6P56537 245 aaKnown RBP19.33■□□□□ 0.68
ITSN1-215ENST00000420666 NLRP3Q96P20 1036 aa19.33■□□□□ 0.68
ITSN1-215ENST00000420666 KDM3BQ7LBC6 1761 aa19.33■□□□□ 0.68
ITSN1-215ENST00000420666 PCNTO95613 3336 aa19.33■□□□□ 0.68
ITSN1-215ENST00000420666 LAMB4A4D0S4 1761 aa19.32■□□□□ 0.68
ITSN1-215ENST00000420666 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
ITSN1-215ENST00000420666 TMEM88BA6NKF7 163 aa19.32■□□□□ 0.68
ITSN1-215ENST00000420666 TMPOP42166 694 aaKnown RBP19.32■□□□□ 0.68
ITSN1-215ENST00000420666 LMOD3Q0VAK6 560 aa19.32■□□□□ 0.68
ITSN1-215ENST00000420666 SLC10A5Q5PT55 438 aa19.32■□□□□ 0.68
ITSN1-215ENST00000420666 CNTNAP1P78357 1384 aa19.32■□□□□ 0.68
ITSN1-215ENST00000420666 PPEF1O14829 653 aaPredicted RBP19.31■□□□□ 0.68
ITSN1-215ENST00000420666 C3orf67Q6ZVT6 689 aa19.31■□□□□ 0.68
ITSN1-215ENST00000420666 UTP14AQ9BVJ6 771 aaKnown RBP19.31■□□□□ 0.68
ITSN1-215ENST00000420666 CACNA1SQ13698 1873 aa19.31■□□□□ 0.68
ITSN1-215ENST00000420666 PROSER3Q2NL68 480 aa19.3■□□□□ 0.68
ITSN1-215ENST00000420666 CNTROBQ8N137 903 aa19.3■□□□□ 0.68
ITSN1-215ENST00000420666 LARGE2Q8N3Y3 721 aa19.3■□□□□ 0.68
ITSN1-215ENST00000420666 SCN4AP35499 1836 aa19.3■□□□□ 0.68
ITSN1-215ENST00000420666 TMX4Q9H1E5 349 aaPredicted RBP19.29■□□□□ 0.68
ITSN1-215ENST00000420666 GJA3Q9Y6H8 435 aa19.29■□□□□ 0.68
ITSN1-215ENST00000420666 DLG5Q8TDM6 1919 aa19.28■□□□□ 0.68
ITSN1-215ENST00000420666 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
ITSN1-215ENST00000420666 ANXA1P04083 346 aa19.28■□□□□ 0.68
ITSN1-215ENST00000420666 HSP90AB3PQ58FF7 597 aa19.28■□□□□ 0.68
ITSN1-215ENST00000420666 MAP1SQ66K74 1059 aaPredicted RBP19.28■□□□□ 0.68
ITSN1-215ENST00000420666 COPS6Q7L5N1 327 aa19.28■□□□□ 0.68
ITSN1-215ENST00000420666 VPS33BQ9H267 617 aa19.28■□□□□ 0.68
ITSN1-215ENST00000420666 ATP6V0A2Q9Y487 856 aa19.28■□□□□ 0.68
ITSN1-215ENST00000420666 LMOD1P29536 600 aaPredicted RBP19.27■□□□□ 0.68
ITSN1-215ENST00000420666 VEGFBP49765 207 aa19.27■□□□□ 0.68
ITSN1-215ENST00000420666 NIM1KQ8IY84 436 aa19.27■□□□□ 0.68
ITSN1-215ENST00000420666 NUP98P52948 1817 aa19.26■□□□□ 0.67
ITSN1-215ENST00000420666 CHL1O00533 1208 aa19.26■□□□□ 0.67
ITSN1-215ENST00000420666 BBOX1O75936 387 aa19.26■□□□□ 0.67
ITSN1-215ENST00000420666 SLC51AQ86UW1 340 aa19.26■□□□□ 0.67
ITSN1-215ENST00000420666 XAGE3Q8WTP9 111 aa19.26■□□□□ 0.67
ITSN1-215ENST00000420666 PPIP5K2O43314 1243 aa19.25■□□□□ 0.67
ITSN1-215ENST00000420666 CAPN15O75808 1086 aa19.25■□□□□ 0.67
ITSN1-215ENST00000420666 SCNN1DP51172 638 aa19.25■□□□□ 0.67
ITSN1-215ENST00000420666 AIMP1Q12904 312 aaKnown RBP19.25■□□□□ 0.67
ITSN1-215ENST00000420666 TCIRG1Q13488 830 aa19.25■□□□□ 0.67
ITSN1-215ENST00000420666 NLRP10Q86W26 655 aa19.25■□□□□ 0.67
ITSN1-215ENST00000420666 NECTIN2Q92692 538 aa19.25■□□□□ 0.67
ITSN1-215ENST00000420666 DDX21Q9NR30 783 aaKnown RBP eCLIP19.25■□□□□ 0.67
ITSN1-215ENST00000420666 ABCC4O15439 1325 aa19.25■□□□□ 0.67
ITSN1-215ENST00000420666 COL4A5P29400 1685 aa19.24■□□□□ 0.67
ITSN1-215ENST00000420666 RASSF10A6NK89 507 aa19.24■□□□□ 0.67
ITSN1-215ENST00000420666 EPS15P42566 896 aa19.24■□□□□ 0.67
ITSN1-215ENST00000420666 NEUROD2Q15784 382 aa19.24■□□□□ 0.67
ITSN1-215ENST00000420666 DEFB115Q30KQ5 88 aa19.24■□□□□ 0.67
ITSN1-215ENST00000420666 SUPT20HQ8NEM7 779 aa19.24■□□□□ 0.67
ITSN1-215ENST00000420666 RTFDC1Q9BY42 306 aaPredicted RBP19.24■□□□□ 0.67
ITSN1-215ENST00000420666 MYBBP1AQ9BQG0 1328 aaKnown RBP19.24■□□□□ 0.67
ITSN1-215ENST00000420666 FOXN1O15353 648 aa19.23■□□□□ 0.67
ITSN1-215ENST00000420666 USP50Q70EL3 339 aaPredicted RBP19.23■□□□□ 0.67
ITSN1-215ENST00000420666 SP8Q8IXZ3 490 aa19.23■□□□□ 0.67
ITSN1-215ENST00000420666 CCDC146Q8IYE0 955 aa19.23■□□□□ 0.67
ITSN1-215ENST00000420666 RUNDC1Q96C34 613 aa19.23■□□□□ 0.67
ITSN1-215ENST00000420666 HCLS1P14317 486 aaPredicted RBP19.22■□□□□ 0.67
ITSN1-215ENST00000420666 DDX10Q13206 875 aaKnown RBP19.22■□□□□ 0.67
ITSN1-215ENST00000420666 AOC3Q16853 763 aa19.22■□□□□ 0.67
ITSN1-215ENST00000420666 PRDM10Q9NQV6 1147 aa19.22■□□□□ 0.67
ITSN1-215ENST00000420666 TRMT112Q9UI30 125 aaKnown RBP19.22■□□□□ 0.67
ITSN1-215ENST00000420666 ZNRF3Q9ULT6 936 aa19.22■□□□□ 0.67
ITSN1-215ENST00000420666 TRIM35Q9UPQ4 493 aa19.22■□□□□ 0.67
ITSN1-215ENST00000420666 SH3TC1Q8TE82 1336 aa19.22■□□□□ 0.67
ITSN1-215ENST00000420666 ADAMTSL1Q8N6G6 1762 aa19.21■□□□□ 0.67
ITSN1-215ENST00000420666 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
ITSN1-215ENST00000420666 DPP8Q6V1X1 898 aaPredicted RBP19.21■□□□□ 0.67
ITSN1-215ENST00000420666 DDX46Q7L014 1031 aaKnown RBP19.21■□□□□ 0.67
ITSN1-215ENST00000420666 MPNDQ8N594 471 aa19.21■□□□□ 0.67
ITSN1-215ENST00000420666 AIDAQ96BJ3 306 aa19.21■□□□□ 0.67
ITSN1-215ENST00000420666 WBP1LQ9NX94 342 aa19.21■□□□□ 0.67
ITSN1-215ENST00000420666 HOXB7P09629 217 aa19.2■□□□□ 0.66
ITSN1-215ENST00000420666 CTCFP49711 727 aaPredicted RBP19.2■□□□□ 0.66
ITSN1-215ENST00000420666 CXCL9Q07325 125 aa19.2■□□□□ 0.66
ITSN1-215ENST00000420666 GRAPQ13588 217 aa19.2■□□□□ 0.66
ITSN1-215ENST00000420666 WDR43Q15061 677 aaKnown RBP eCLIP19.2■□□□□ 0.66
ITSN1-215ENST00000420666 GRAPLQ8TC17 118 aaPredicted RBP19.2■□□□□ 0.66
ITSN1-215ENST00000420666 LAS1LQ9Y4W2 734 aaKnown RBP19.2■□□□□ 0.66
ITSN1-215ENST00000420666 PLBD2Q8NHP8 589 aa19.19■□□□□ 0.66
ITSN1-215ENST00000420666 ADARB2Q9NS39 739 aaKnown RBP19.19■□□□□ 0.66
ITSN1-215ENST00000420666 GPRC5DQ9NZD1 345 aa19.19■□□□□ 0.66
ITSN1-215ENST00000420666 CHPF2Q9P2E5 772 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms