RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 SYNE4Q8N205 404 aa16.83■□□□□ 0.28
PDLIM4-203ENST00000418373 PNNQ9H307 717 aaKnown RBP16.83■□□□□ 0.28
PDLIM4-203ENST00000418373 ZBTB3Q9H5J0 574 aa16.83■□□□□ 0.28
PDLIM4-203ENST00000418373 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.28
PDLIM4-203ENST00000418373 CNTNAP1P78357 1384 aa16.82■□□□□ 0.28
PDLIM4-203ENST00000418373 PDIA6Q15084 440 aa16.82■□□□□ 0.28
PDLIM4-203ENST00000418373 CC2D2BQ6DHV5 1058 aa16.82■□□□□ 0.28
PDLIM4-203ENST00000418373 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
PDLIM4-203ENST00000418373 HACL1Q9UJ83 578 aa16.82■□□□□ 0.28
PDLIM4-203ENST00000418373 C3orf67Q6ZVT6 689 aa16.81■□□□□ 0.28
PDLIM4-203ENST00000418373 SLC51AQ86UW1 340 aa16.81■□□□□ 0.28
PDLIM4-203ENST00000418373 GPC2Q8N158 579 aa16.81■□□□□ 0.28
PDLIM4-203ENST00000418373 CRAMP1Q96RY5 1269 aa16.81■□□□□ 0.28
PDLIM4-203ENST00000418373 MKRN1Q9UHC7 482 aaKnown RBP16.81■□□□□ 0.28
PDLIM4-203ENST00000418373 RNF123Q5XPI4 1314 aa16.8■□□□□ 0.28
PDLIM4-203ENST00000418373 EPHX2P34913 555 aa16.8■□□□□ 0.28
PDLIM4-203ENST00000418373 RPGRQ92834 1020 aaKnown RBP16.8■□□□□ 0.28
PDLIM4-203ENST00000418373 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
PDLIM4-203ENST00000418373 GRIPAP1Q4V328 841 aa16.79■□□□□ 0.28
PDLIM4-203ENST00000418373 TNS4Q8IZW8 715 aa16.79■□□□□ 0.28
PDLIM4-203ENST00000418373 BABAM1Q9NWV8 329 aa16.79■□□□□ 0.28
PDLIM4-203ENST00000418373 RIPK4P57078 832 aa16.78■□□□□ 0.28
PDLIM4-203ENST00000418373 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
PDLIM4-203ENST00000418373 PARP10Q53GL7 1025 aa16.78■□□□□ 0.28
PDLIM4-203ENST00000418373 EAPPQ56P03 285 aaPredicted RBP16.78■□□□□ 0.28
PDLIM4-203ENST00000418373 PNMA8AQ86V59 439 aaPredicted RBP16.78■□□□□ 0.28
PDLIM4-203ENST00000418373 JDP2Q8WYK2 163 aa16.78■□□□□ 0.28
PDLIM4-203ENST00000418373 TMEM88BA6NKF7 163 aa16.77■□□□□ 0.28
PDLIM4-203ENST00000418373 PPEF1O14829 653 aaPredicted RBP16.77■□□□□ 0.28
PDLIM4-203ENST00000418373 RALBP1Q15311 655 aa16.77■□□□□ 0.28
PDLIM4-203ENST00000418373 SLC10A5Q5PT55 438 aa16.77■□□□□ 0.28
PDLIM4-203ENST00000418373 RBM17Q96I25 401 aaKnown RBP16.77■□□□□ 0.28
PDLIM4-203ENST00000418373 TAF1P21675 1872 aa16.77■□□□□ 0.27
PDLIM4-203ENST00000418373 TRPM7Q96QT4 1865 aa16.77■□□□□ 0.27
PDLIM4-203ENST00000418373 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
PDLIM4-203ENST00000418373 PPP1R42Q7Z4L9 355 aa16.76■□□□□ 0.27
PDLIM4-203ENST00000418373 LRRC37AA6NMS7 1700 aa16.76■□□□□ 0.27
PDLIM4-203ENST00000418373 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
PDLIM4-203ENST00000418373 ANXA1P04083 346 aa16.75■□□□□ 0.27
PDLIM4-203ENST00000418373 EIF2S2P20042 333 aaKnown RBP16.75■□□□□ 0.27
PDLIM4-203ENST00000418373 SCNN1DP51172 638 aa16.75■□□□□ 0.27
PDLIM4-203ENST00000418373 MAP1SQ66K74 1059 aaPredicted RBP16.75■□□□□ 0.27
PDLIM4-203ENST00000418373 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
PDLIM4-203ENST00000418373 THSD7BQ9C0I4 1608 aa16.74■□□□□ 0.27
PDLIM4-203ENST00000418373 VEGFBP49765 207 aa16.74■□□□□ 0.27
PDLIM4-203ENST00000418373 EIF6P56537 245 aaKnown RBP16.74■□□□□ 0.27
PDLIM4-203ENST00000418373 LMOD3Q0VAK6 560 aa16.74■□□□□ 0.27
PDLIM4-203ENST00000418373 LARGE2Q8N3Y3 721 aa16.74■□□□□ 0.27
PDLIM4-203ENST00000418373 NLRP3Q96P20 1036 aa16.74■□□□□ 0.27
PDLIM4-203ENST00000418373 UTP14AQ9BVJ6 771 aaKnown RBP16.74■□□□□ 0.27
PDLIM4-203ENST00000418373 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
PDLIM4-203ENST00000418373 ATP6V0A2Q9Y487 856 aa16.74■□□□□ 0.27
PDLIM4-203ENST00000418373 ABCC4O15439 1325 aa16.73■□□□□ 0.27
PDLIM4-203ENST00000418373 RASSF10A6NK89 507 aa16.73■□□□□ 0.27
PDLIM4-203ENST00000418373 GJA3Q9Y6H8 435 aa16.73■□□□□ 0.27
PDLIM4-203ENST00000418373 DUOX1Q9NRD9 1551 aa16.72■□□□□ 0.27
PDLIM4-203ENST00000418373 CHL1O00533 1208 aa16.72■□□□□ 0.27
PDLIM4-203ENST00000418373 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
PDLIM4-203ENST00000418373 FOXN1O15353 648 aa16.72■□□□□ 0.27
PDLIM4-203ENST00000418373 COPS6Q7L5N1 327 aa16.72■□□□□ 0.27
PDLIM4-203ENST00000418373 NLRP10Q86W26 655 aa16.72■□□□□ 0.27
PDLIM4-203ENST00000418373 RTFDC1Q9BY42 306 aaPredicted RBP16.72■□□□□ 0.27
PDLIM4-203ENST00000418373 MYBBP1AQ9BQG0 1328 aaKnown RBP16.71■□□□□ 0.27
PDLIM4-203ENST00000418373 CAPN15O75808 1086 aa16.71■□□□□ 0.27
PDLIM4-203ENST00000418373 EPS15P42566 896 aa16.71■□□□□ 0.27
PDLIM4-203ENST00000418373 KRT24Q2M2I5 525 aa16.71■□□□□ 0.27
PDLIM4-203ENST00000418373 HSP90AB3PQ58FF7 597 aa16.71■□□□□ 0.27
PDLIM4-203ENST00000418373 XAGE3Q8WTP9 111 aa16.71■□□□□ 0.27
PDLIM4-203ENST00000418373 VPS33BQ9H267 617 aa16.71■□□□□ 0.27
PDLIM4-203ENST00000418373 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
PDLIM4-203ENST00000418373 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
PDLIM4-203ENST00000418373 PPIP5K2O43314 1243 aa16.7■□□□□ 0.26
PDLIM4-203ENST00000418373 LMOD1P29536 600 aaPredicted RBP16.7■□□□□ 0.26
PDLIM4-203ENST00000418373 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
PDLIM4-203ENST00000418373 AOC3Q16853 763 aa16.7■□□□□ 0.26
PDLIM4-203ENST00000418373 NIM1KQ8IY84 436 aa16.7■□□□□ 0.26
PDLIM4-203ENST00000418373 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
PDLIM4-203ENST00000418373 NECTIN2Q92692 538 aa16.69■□□□□ 0.26
PDLIM4-203ENST00000418373 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
PDLIM4-203ENST00000418373 WBP1LQ9NX94 342 aa16.69■□□□□ 0.26
PDLIM4-203ENST00000418373 BBOX1O75936 387 aa16.68■□□□□ 0.26
PDLIM4-203ENST00000418373 HCLS1P14317 486 aaPredicted RBP16.68■□□□□ 0.26
PDLIM4-203ENST00000418373 AIMP1Q12904 312 aaKnown RBP16.68■□□□□ 0.26
PDLIM4-203ENST00000418373 USP50Q70EL3 339 aaPredicted RBP16.68■□□□□ 0.26
PDLIM4-203ENST00000418373 SP8Q8IXZ3 490 aa16.68■□□□□ 0.26
PDLIM4-203ENST00000418373 GPRC5DQ9NZD1 345 aa16.68■□□□□ 0.26
PDLIM4-203ENST00000418373 ZNRF3Q9ULT6 936 aa16.68■□□□□ 0.26
PDLIM4-203ENST00000418373 COL4A1P02462 1669 aa16.68■□□□□ 0.26
PDLIM4-203ENST00000418373 SH3TC1Q8TE82 1336 aa16.68■□□□□ 0.26
PDLIM4-203ENST00000418373 FMR1Q06787 632 aaKnown RBP eCLIP16.67■□□□□ 0.26
PDLIM4-203ENST00000418373 CXCL9Q07325 125 aa16.67■□□□□ 0.26
PDLIM4-203ENST00000418373 DEFB115Q30KQ5 88 aa16.67■□□□□ 0.26
PDLIM4-203ENST00000418373 SUPT20HQ8NEM7 779 aa16.67■□□□□ 0.26
PDLIM4-203ENST00000418373 CHPF2Q9P2E5 772 aa16.67■□□□□ 0.26
PDLIM4-203ENST00000418373 HOXB7P09629 217 aa16.66■□□□□ 0.26
PDLIM4-203ENST00000418373 CTCFP49711 727 aaPredicted RBP16.66■□□□□ 0.26
PDLIM4-203ENST00000418373 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
PDLIM4-203ENST00000418373 GRAPQ13588 217 aa16.66■□□□□ 0.26
PDLIM4-203ENST00000418373 NEUROD2Q15784 382 aa16.66■□□□□ 0.26
PDLIM4-203ENST00000418373 DPP8Q6V1X1 898 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms