RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
SF1-207ENST00000413951 HSP90AB3PQ58FF7 597 aa21.81■■□□□ 1.08
SF1-207ENST00000413951 SYNE4Q8N205 404 aa21.81■■□□□ 1.08
SF1-207ENST00000413951 RNF123Q5XPI4 1314 aa21.8■■□□□ 1.08
SF1-207ENST00000413951 EIF2S2P20042 333 aaKnown RBP21.8■■□□□ 1.08
SF1-207ENST00000413951 WDR43Q15061 677 aaKnown RBP eCLIP21.8■■□□□ 1.08
SF1-207ENST00000413951 PNMA8AQ86V59 439 aaPredicted RBP21.8■■□□□ 1.08
SF1-207ENST00000413951 NLRP3Q96P20 1036 aa21.8■■□□□ 1.08
SF1-207ENST00000413951 CRAMP1Q96RY5 1269 aa21.8■■□□□ 1.08
SF1-207ENST00000413951 CREBZFQ9NS37 354 aa21.8■■□□□ 1.08
SF1-207ENST00000413951 CACNA1SQ13698 1873 aa21.79■■□□□ 1.08
SF1-207ENST00000413951 SUSD4Q5VX71 490 aa21.79■■□□□ 1.08
SF1-207ENST00000413951 TAF1DQ9H5J8 278 aaPredicted RBP21.79■■□□□ 1.08
SF1-207ENST00000413951 HACL1Q9UJ83 578 aa21.79■■□□□ 1.08
SF1-207ENST00000413951 ADAMTS8Q9UP79 889 aa21.79■■□□□ 1.08
SF1-207ENST00000413951 ABCC12Q96J65 1359 aa21.78■■□□□ 1.08
SF1-207ENST00000413951 FZD9O00144 591 aa21.78■■□□□ 1.08
SF1-207ENST00000413951 GPC2Q8N158 579 aa21.78■■□□□ 1.08
SF1-207ENST00000413951 UTP14AQ9BVJ6 771 aaKnown RBP21.78■■□□□ 1.08
SF1-207ENST00000413951 UBN2Q6ZU65 1347 aa21.78■■□□□ 1.08
SF1-207ENST00000413951 NTSR2O95665 410 aa21.77■■□□□ 1.08
SF1-207ENST00000413951 EIF6P56537 245 aaKnown RBP21.77■■□□□ 1.08
SF1-207ENST00000413951 MIER1Q8N108 512 aa21.77■■□□□ 1.08
SF1-207ENST00000413951 SCN4AP35499 1836 aa21.76■■□□□ 1.07
SF1-207ENST00000413951 RUNDC1Q96C34 613 aa21.76■■□□□ 1.07
SF1-207ENST00000413951 VPS33BQ9H267 617 aa21.76■■□□□ 1.07
SF1-207ENST00000413951 NUP98P52948 1817 aa21.76■■□□□ 1.07
SF1-207ENST00000413951 PPEF1O14829 653 aaPredicted RBP21.75■■□□□ 1.07
SF1-207ENST00000413951 SLC10A5Q5PT55 438 aa21.75■■□□□ 1.07
SF1-207ENST00000413951 OLFM4Q6UX06 510 aa21.75■■□□□ 1.07
SF1-207ENST00000413951 EPHX2P34913 555 aa21.74■■□□□ 1.07
SF1-207ENST00000413951 PDIA6Q15084 440 aa21.74■■□□□ 1.07
SF1-207ENST00000413951 CLEC11AQ9Y240 323 aa21.74■■□□□ 1.07
SF1-207ENST00000413951 ZNF541Q9H0D2 1346 aa21.74■■□□□ 1.07
SF1-207ENST00000413951 LMOD1P29536 600 aaPredicted RBP21.73■■□□□ 1.07
SF1-207ENST00000413951 EAPPQ56P03 285 aaPredicted RBP21.73■■□□□ 1.07
SF1-207ENST00000413951 LRP10Q7Z4F1 713 aa21.73■■□□□ 1.07
SF1-207ENST00000413951 LARGE2Q8N3Y3 721 aa21.73■■□□□ 1.07
SF1-207ENST00000413951 SUPT20HQ8NEM7 779 aa21.73■■□□□ 1.07
SF1-207ENST00000413951 DDX21Q9NR30 783 aaKnown RBP eCLIP21.73■■□□□ 1.07
SF1-207ENST00000413951 CHL1O00533 1208 aa21.72■■□□□ 1.07
SF1-207ENST00000413951 HOXB7P09629 217 aa21.72■■□□□ 1.07
SF1-207ENST00000413951 NEUROD2Q15784 382 aa21.72■■□□□ 1.07
SF1-207ENST00000413951 COPS6Q7L5N1 327 aa21.72■■□□□ 1.07
SF1-207ENST00000413951 BBOX1O75936 387 aa21.71■■□□□ 1.07
SF1-207ENST00000413951 POTEIP0CG38 1075 aa21.71■■□□□ 1.07
SF1-207ENST00000413951 POTEJP0CG39 1038 aa21.71■■□□□ 1.07
SF1-207ENST00000413951 PASKQ96RG2 1323 aa21.71■■□□□ 1.07
SF1-207ENST00000413951 SNED1Q8TER0 1413 aa21.71■■□□□ 1.07
SF1-207ENST00000413951 TCIRG1Q13488 830 aa21.7■■□□□ 1.06
SF1-207ENST00000413951 NIM1KQ8IY84 436 aa21.7■■□□□ 1.06
SF1-207ENST00000413951 CCDC146Q8IYE0 955 aa21.7■■□□□ 1.06
SF1-207ENST00000413951 ATP6V0A2Q9Y487 856 aa21.7■■□□□ 1.06
SF1-207ENST00000413951 LAS1LQ9Y4W2 734 aaKnown RBP21.7■■□□□ 1.06
SF1-207ENST00000413951 TMEM88BA6NKF7 163 aa21.69■■□□□ 1.06
SF1-207ENST00000413951 HSPA1AP0DMV8 641 aaKnown RBP21.69■■□□□ 1.06
SF1-207ENST00000413951 HSPA1BP0DMV9 641 aaKnown RBP21.69■■□□□ 1.06
SF1-207ENST00000413951 AIMP1Q12904 312 aaKnown RBP21.69■■□□□ 1.06
SF1-207ENST00000413951 XAGE3Q8WTP9 111 aa21.69■■□□□ 1.06
SF1-207ENST00000413951 PROSER3Q2NL68 480 aa21.68■■□□□ 1.06
SF1-207ENST00000413951 DDX46Q7L014 1031 aaKnown RBP21.68■■□□□ 1.06
SF1-207ENST00000413951 TMC4Q7Z404 712 aa21.68■■□□□ 1.06
SF1-207ENST00000413951 NLRP10Q86W26 655 aa21.68■■□□□ 1.06
SF1-207ENST00000413951 DBF4Q9UBU7 674 aaPredicted RBP21.68■■□□□ 1.06
SF1-207ENST00000413951 TRMT112Q9UI30 125 aaKnown RBP21.68■■□□□ 1.06
SF1-207ENST00000413951 GJA3Q9Y6H8 435 aa21.68■■□□□ 1.06
SF1-207ENST00000413951 SH3TC1Q8TE82 1336 aa21.68■■□□□ 1.06
SF1-207ENST00000413951 PPIP5K2O43314 1243 aa21.67■■□□□ 1.06
SF1-207ENST00000413951 ANXA1P04083 346 aa21.67■■□□□ 1.06
SF1-207ENST00000413951 CALD1Q05682 793 aaKnown RBP21.67■■□□□ 1.06
SF1-207ENST00000413951 HDGFL1Q5TGJ6 251 aa21.67■■□□□ 1.06
SF1-207ENST00000413951 NECTIN2Q92692 538 aa21.67■■□□□ 1.06
SF1-207ENST00000413951 CHMP4AQ9BY43 222 aa21.67■■□□□ 1.06
SF1-207ENST00000413951 MKRN1Q9UHC7 482 aaKnown RBP21.67■■□□□ 1.06
SF1-207ENST00000413951 TCERG1O14776 1098 aaKnown RBP21.66■■□□□ 1.06
SF1-207ENST00000413951 ITGBL1O95965 494 aaPredicted RBP21.66■■□□□ 1.06
SF1-207ENST00000413951 COL13A1Q5TAT6 717 aaPredicted RBP21.66■■□□□ 1.06
SF1-207ENST00000413951 SP8Q8IXZ3 490 aa21.66■■□□□ 1.06
SF1-207ENST00000413951 CNTROBQ8N137 903 aa21.66■■□□□ 1.06
SF1-207ENST00000413951 CFAP44Q96MT7 982 aa21.66■■□□□ 1.06
SF1-207ENST00000413951 TRIM35Q9UPQ4 493 aa21.66■■□□□ 1.06
SF1-207ENST00000413951 CNTNAP1P78357 1384 aa21.65■■□□□ 1.06
SF1-207ENST00000413951 ABCC4O15439 1325 aa21.65■■□□□ 1.06
SF1-207ENST00000413951 PLBD2Q8NHP8 589 aa21.65■■□□□ 1.06
SF1-207ENST00000413951 HYPKQ9NX55 129 aa21.65■■□□□ 1.06
SF1-207ENST00000413951 DPP8Q6V1X1 898 aaPredicted RBP21.64■■□□□ 1.05
SF1-207ENST00000413951 ANKRD13DQ6ZTN6 518 aa21.64■■□□□ 1.05
SF1-207ENST00000413951 C3orf67Q6ZVT6 689 aa21.64■■□□□ 1.05
SF1-207ENST00000413951 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.05
SF1-207ENST00000413951 TNS4Q8IZW8 715 aa21.64■■□□□ 1.05
SF1-207ENST00000413951 RTFDC1Q9BY42 306 aaPredicted RBP21.64■■□□□ 1.05
SF1-207ENST00000413951 CHPF2Q9P2E5 772 aa21.64■■□□□ 1.05
SF1-207ENST00000413951 HSP90B1P14625 803 aaKnown RBP21.63■■□□□ 1.05
SF1-207ENST00000413951 GRAPQ13588 217 aa21.63■■□□□ 1.05
SF1-207ENST00000413951 MPNDQ8N594 471 aa21.63■■□□□ 1.05
SF1-207ENST00000413951 GRAPLQ8TC17 118 aaPredicted RBP21.63■■□□□ 1.05
SF1-207ENST00000413951 ZNRF3Q9ULT6 936 aa21.63■■□□□ 1.05
SF1-207ENST00000413951 HCLS1P14317 486 aaPredicted RBP21.62■■□□□ 1.05
SF1-207ENST00000413951 FAM9BQ8IZU0 186 aa21.62■■□□□ 1.05
SF1-207ENST00000413951 MAP1SQ66K74 1059 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms