RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 TMPOP42166 694 aaKnown RBP16.52■□□□□ 0.24
LINC00388-201ENST00000412714 SUSD4Q5VX71 490 aa16.52■□□□□ 0.24
LINC00388-201ENST00000412714 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.24
LINC00388-201ENST00000412714 SYNE4Q8N205 404 aa16.52■□□□□ 0.24
LINC00388-201ENST00000412714 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
LINC00388-201ENST00000412714 PCNTO95613 3336 aa16.51■□□□□ 0.23
LINC00388-201ENST00000412714 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
LINC00388-201ENST00000412714 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
LINC00388-201ENST00000412714 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC00388-201ENST00000412714 PARP10Q53GL7 1025 aa16.51■□□□□ 0.23
LINC00388-201ENST00000412714 LDHDQ86WU2 507 aa16.51■□□□□ 0.23
LINC00388-201ENST00000412714 ZNF34Q8IZ26 560 aa16.51■□□□□ 0.23
LINC00388-201ENST00000412714 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
LINC00388-201ENST00000412714 RBM17Q96I25 401 aaKnown RBP16.51■□□□□ 0.23
LINC00388-201ENST00000412714 PSMD1Q99460 953 aa16.51■□□□□ 0.23
LINC00388-201ENST00000412714 TAF1DQ9H5J8 278 aaPredicted RBP16.51■□□□□ 0.23
LINC00388-201ENST00000412714 ZBED9Q6R2W3 1325 aa16.5■□□□□ 0.23
LINC00388-201ENST00000412714 NTSR2O95665 410 aa16.5■□□□□ 0.23
LINC00388-201ENST00000412714 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
LINC00388-201ENST00000412714 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
LINC00388-201ENST00000412714 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
LINC00388-201ENST00000412714 HACL1Q9UJ83 578 aa16.5■□□□□ 0.23
LINC00388-201ENST00000412714 EAPPQ56P03 285 aaPredicted RBP16.49■□□□□ 0.23
LINC00388-201ENST00000412714 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
LINC00388-201ENST00000412714 TMX4Q9H1E5 349 aaPredicted RBP16.49■□□□□ 0.23
LINC00388-201ENST00000412714 SNED1Q8TER0 1413 aa16.48■□□□□ 0.23
LINC00388-201ENST00000412714 FZD9O00144 591 aa16.48■□□□□ 0.23
LINC00388-201ENST00000412714 PPEF1O14829 653 aaPredicted RBP16.48■□□□□ 0.23
LINC00388-201ENST00000412714 WDR43Q15061 677 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00388-201ENST00000412714 PDIA6Q15084 440 aa16.48■□□□□ 0.23
LINC00388-201ENST00000412714 NEUROD2Q15784 382 aa16.48■□□□□ 0.23
LINC00388-201ENST00000412714 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
LINC00388-201ENST00000412714 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
LINC00388-201ENST00000412714 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
LINC00388-201ENST00000412714 CLEC11AQ9Y240 323 aa16.48■□□□□ 0.23
LINC00388-201ENST00000412714 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
LINC00388-201ENST00000412714 ANXA1P04083 346 aa16.47■□□□□ 0.23
LINC00388-201ENST00000412714 HSPA1AP0DMV8 641 aaKnown RBP16.47■□□□□ 0.23
LINC00388-201ENST00000412714 HSPA1BP0DMV9 641 aaKnown RBP16.47■□□□□ 0.23
LINC00388-201ENST00000412714 EPHX2P34913 555 aa16.47■□□□□ 0.23
LINC00388-201ENST00000412714 EIF6P56537 245 aaKnown RBP16.47■□□□□ 0.23
LINC00388-201ENST00000412714 PROSER3Q2NL68 480 aa16.47■□□□□ 0.23
LINC00388-201ENST00000412714 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
LINC00388-201ENST00000412714 LRP10Q7Z4F1 713 aa16.47■□□□□ 0.23
LINC00388-201ENST00000412714 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
LINC00388-201ENST00000412714 GPC2Q8N158 579 aa16.47■□□□□ 0.23
LINC00388-201ENST00000412714 NECTIN2Q92692 538 aa16.47■□□□□ 0.23
LINC00388-201ENST00000412714 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
LINC00388-201ENST00000412714 TCERG1O14776 1098 aaKnown RBP16.46■□□□□ 0.23
LINC00388-201ENST00000412714 COL13A1Q5TAT6 717 aaPredicted RBP16.46■□□□□ 0.23
LINC00388-201ENST00000412714 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
LINC00388-201ENST00000412714 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
LINC00388-201ENST00000412714 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
LINC00388-201ENST00000412714 MKRN1Q9UHC7 482 aaKnown RBP16.46■□□□□ 0.23
LINC00388-201ENST00000412714 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
LINC00388-201ENST00000412714 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.22
LINC00388-201ENST00000412714 AIMP1Q12904 312 aaKnown RBP16.45■□□□□ 0.22
LINC00388-201ENST00000412714 COPS6Q7L5N1 327 aa16.45■□□□□ 0.22
LINC00388-201ENST00000412714 XAGE3Q8WTP9 111 aa16.45■□□□□ 0.22
LINC00388-201ENST00000412714 GJA3Q9Y6H8 435 aa16.45■□□□□ 0.22
LINC00388-201ENST00000412714 PASKQ96RG2 1323 aa16.45■□□□□ 0.22
LINC00388-201ENST00000412714 LMOD1P29536 600 aaPredicted RBP16.44■□□□□ 0.22
LINC00388-201ENST00000412714 SLC10A5Q5PT55 438 aa16.44■□□□□ 0.22
LINC00388-201ENST00000412714 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
LINC00388-201ENST00000412714 DDX21Q9NR30 783 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00388-201ENST00000412714 CHL1O00533 1208 aa16.43■□□□□ 0.22
LINC00388-201ENST00000412714 NIM1KQ8IY84 436 aa16.43■□□□□ 0.22
LINC00388-201ENST00000412714 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
LINC00388-201ENST00000412714 ADAMTSL1Q8N6G6 1762 aa16.42■□□□□ 0.22
LINC00388-201ENST00000412714 TMEM88BA6NKF7 163 aa16.42■□□□□ 0.22
LINC00388-201ENST00000412714 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
LINC00388-201ENST00000412714 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
LINC00388-201ENST00000412714 TRMT112Q9UI30 125 aaKnown RBP16.42■□□□□ 0.22
LINC00388-201ENST00000412714 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
LINC00388-201ENST00000412714 COL4A5P29400 1685 aa16.42■□□□□ 0.22
LINC00388-201ENST00000412714 ABCC4O15439 1325 aa16.42■□□□□ 0.22
LINC00388-201ENST00000412714 ITGBL1O95965 494 aaPredicted RBP16.41■□□□□ 0.22
LINC00388-201ENST00000412714 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
LINC00388-201ENST00000412714 KRT24Q2M2I5 525 aa16.41■□□□□ 0.22
LINC00388-201ENST00000412714 HDGFL1Q5TGJ6 251 aa16.41■□□□□ 0.22
LINC00388-201ENST00000412714 TNS4Q8IZW8 715 aa16.41■□□□□ 0.22
LINC00388-201ENST00000412714 SUPT20HQ8NEM7 779 aa16.41■□□□□ 0.22
LINC00388-201ENST00000412714 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
LINC00388-201ENST00000412714 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
LINC00388-201ENST00000412714 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
LINC00388-201ENST00000412714 BBOX1O75936 387 aa16.4■□□□□ 0.22
LINC00388-201ENST00000412714 HOXB7P09629 217 aa16.4■□□□□ 0.22
LINC00388-201ENST00000412714 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
LINC00388-201ENST00000412714 MAP1SQ66K74 1059 aaPredicted RBP16.4■□□□□ 0.22
LINC00388-201ENST00000412714 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
LINC00388-201ENST00000412714 SLC51AQ86UW1 340 aa16.4■□□□□ 0.22
LINC00388-201ENST00000412714 CNTROBQ8N137 903 aa16.4■□□□□ 0.22
LINC00388-201ENST00000412714 VPS33BQ9H267 617 aa16.4■□□□□ 0.22
LINC00388-201ENST00000412714 LAMB2P55268 1798 aa16.4■□□□□ 0.22
LINC00388-201ENST00000412714 AOC3Q16853 763 aa16.39■□□□□ 0.21
LINC00388-201ENST00000412714 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
LINC00388-201ENST00000412714 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
LINC00388-201ENST00000412714 SP8Q8IXZ3 490 aa16.38■□□□□ 0.21
LINC00388-201ENST00000412714 DBF4Q9UBU7 674 aaPredicted RBP16.38■□□□□ 0.21
LINC00388-201ENST00000412714 LTBP1Q14766 1721 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms