RNA–Protein interactions for RNA: ENST00000408909.6

TRPM3-215, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRPM3, Length 4,701 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-215ENST00000408909 CHD1LQ86WJ1 897 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 FMNL3Q8IVF7 1028 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 CASQ2O14958 399 aaPredicted RBP10.85□□□□□ -0.67
TRPM3-215ENST00000408909 SMC1BQ8NDV3 1235 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRPM3-215ENST00000408909 ATP2A2P16615 1042 aaKnown RBP10.85□□□□□ -0.67
TRPM3-215ENST00000408909 STX1AQ16623 288 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 CCDC96Q2M329 555 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 ERCC6LQ2NKX8 1250 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 IFT74Q96LB3 600 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 CTAGE1Q96RT6 745 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 JADE2Q9NQC1 790 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 HYPKQ9NX55 129 aa10.85□□□□□ -0.67
TRPM3-215ENST00000408909 STMN1P16949 149 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 CNGA1P29973 690 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 FKBP4Q02790 459 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRPM3-215ENST00000408909 CEP128Q6ZU80 1094 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 SLF2Q8IX21 1173 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 CACNA2D3Q8IZS8 1091 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 UBA5Q9GZZ9 404 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 RMND1Q9NWS8 449 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 RAD54L2Q9Y4B4 1467 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 PRC1O43663 620 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 IGHMBP2P38935 993 aaKnown RBP10.84□□□□□ -0.67
TRPM3-215ENST00000408909 GNG11P61952 73 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 EXOSC9Q06265 439 aaKnown RBP10.84□□□□□ -0.67
TRPM3-215ENST00000408909 NOLC1Q14978 699 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRPM3-215ENST00000408909 AACSQ86V21 672 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 TBC1D5Q92609 795 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 IGHDP01880 384 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 CFAP58Q5T655 872 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 CWC25Q9NXE8 425 aaPredicted RBP10.84□□□□□ -0.67
TRPM3-215ENST00000408909 GAPVD1Q14C86 1478 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 RALGAPBQ86X10 1494 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 RAB11FIP3O75154 756 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 SNX16P57768 344 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 SPAG5Q96R06 1193 aa10.84□□□□□ -0.67
TRPM3-215ENST00000408909 MGEA5O60502 916 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 TCERG1LQ5VWI1 586 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 LMNTD2Q8IXW0 634 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 RGS22Q8NE09 1264 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 PRPF31Q8WWY3 499 aaKnown RBP10.83□□□□□ -0.68
TRPM3-215ENST00000408909 RBM42Q9BTD8 480 aaKnown RBP10.83□□□□□ -0.68
TRPM3-215ENST00000408909 ZSCAN20P17040 1043 aaPredicted RBP10.83□□□□□ -0.68
TRPM3-215ENST00000408909 UBA7P41226 1012 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 PIP4K2BP78356 416 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 CEP120Q8N960 986 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 KIF1BPQ96EK5 621 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 SERPINA10Q9UK55 444 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 ARL1P40616 181 aaPredicted RBP10.83□□□□□ -0.68
TRPM3-215ENST00000408909 CCDC129Q6ZRS4 1044 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 MPHOSPH6Q99547 160 aaKnown RBP10.83□□□□□ -0.68
TRPM3-215ENST00000408909 MKNK2Q9HBH9 465 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 TXNDC16Q9P2K2 825 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 HMGXB3Q12766 1538 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 SRGAP3O43295 1099 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 NBPF7P0C2Y1 421 aaPredicted RBP10.83□□□□□ -0.68
TRPM3-215ENST00000408909 MTHFSP49914 203 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 GBP6Q6ZN66 633 aa10.83□□□□□ -0.68
TRPM3-215ENST00000408909 C16orf45Q96MC5 204 aaPredicted RBP10.83□□□□□ -0.68
TRPM3-215ENST00000408909 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 PDS5BQ9NTI5 1447 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 IFIT1P09914 478 aaKnown RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 MRPS9P82933 396 aaKnown RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 ZSCAN23Q3MJ62 389 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 CCDC102BQ68D86 513 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 CROCCP2Q86T23 111 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 CEP57Q86XR8 500 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 STMN2Q93045 179 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 SNX21Q969T3 373 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 UTP14AQ9BVJ6 771 aaKnown RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 SPG7Q9UQ90 795 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 PPFIA2O75334 1257 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 GIGYF1O75420 1035 aaPredicted RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 SAMD15Q9P1V8 674 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 MTRF1LQ9UGC7 380 aaKnown RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 RSPH14Q9UHP6 348 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 ZNF165P49910 485 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 DNA2P51530 1060 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 APBB1IPQ7Z5R6 666 aaPredicted RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 CRACR2BQ8N4Y2 399 aaPredicted RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 GABPB2Q8TAK5 448 aaPredicted RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 CCDC114Q96M63 670 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 ZNF830Q96NB3 372 aaPredicted RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 NAPBQ9H115 298 aa10.82□□□□□ -0.68
TRPM3-215ENST00000408909 RBM28Q9NW13 759 aaKnown RBP10.82□□□□□ -0.68
TRPM3-215ENST00000408909 FAM177BA6PVY3 158 aa10.81□□□□□ -0.68
TRPM3-215ENST00000408909 PRKAR2BP31323 418 aa10.81□□□□□ -0.68
TRPM3-215ENST00000408909 MAP7Q14244 749 aa10.81□□□□□ -0.68
TRPM3-215ENST00000408909 CPLX4Q7Z7G2 160 aa10.81□□□□□ -0.68
TRPM3-215ENST00000408909 MSANTD4Q8NCY6 345 aa10.81□□□□□ -0.68
TRPM3-215ENST00000408909 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
TRPM3-215ENST00000408909 TRIM7Q9C029 511 aa10.81□□□□□ -0.68
TRPM3-215ENST00000408909 ODF2LQ9ULJ1 636 aa10.81□□□□□ -0.68
TRPM3-215ENST00000408909 IDH1O75874 414 aaKnown RBP10.81□□□□□ -0.68
TRPM3-215ENST00000408909 U2AF2P26368 475 aaKnown RBP eCLIP10.81□□□□□ -0.68
TRPM3-215ENST00000408909 TTC31Q49AM3 519 aaPredicted RBP10.81□□□□□ -0.68
TRPM3-215ENST00000408909 SH2D4BQ5SQS7 431 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms