RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 MTMR6Q9Y217 621 aa12.39□□□□□ -0.43
USP19-204ENST00000398896 ME1P48163 572 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 LIG3P49916 1009 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 TRDNQ13061 729 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 CC2D1AQ6P1N0 951 aaPredicted RBP12.38□□□□□ -0.43
USP19-204ENST00000398896 NECAB1Q8N987 351 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 EVC2Q86UK5 1308 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 CBFA2T2O43439 604 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
USP19-204ENST00000398896 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 SLC24A3Q9HC58 644 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 PDE11AQ9HCR9 933 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 ADGRL2O95490 1459 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 DTNBO60941 627 aa12.38□□□□□ -0.43
USP19-204ENST00000398896 CWC27Q6UX04 472 aaKnown RBP12.38□□□□□ -0.43
USP19-204ENST00000398896 FAM43BQ6ZT52 329 aaPredicted RBP12.38□□□□□ -0.43
USP19-204ENST00000398896 LONRF2Q1L5Z9 754 aa12.37□□□□□ -0.43
USP19-204ENST00000398896 CFAP100Q494V2 611 aa12.37□□□□□ -0.43
USP19-204ENST00000398896 FMNL3Q8IVF7 1028 aa12.37□□□□□ -0.43
USP19-204ENST00000398896 STK31Q9BXU1 1019 aa12.37□□□□□ -0.43
USP19-204ENST00000398896 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
USP19-204ENST00000398896 BRD3Q15059 726 aa12.37□□□□□ -0.43
USP19-204ENST00000398896 CCDC30Q5VVM6 783 aa12.37□□□□□ -0.43
USP19-204ENST00000398896 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
USP19-204ENST00000398896 IFNKQ9P0W0 207 aa12.37□□□□□ -0.43
USP19-204ENST00000398896 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.37□□□□□ -0.43
USP19-204ENST00000398896 HDGFL2Q7Z4V5 671 aaPredicted RBP12.37□□□□□ -0.43
USP19-204ENST00000398896 DDX54Q8TDD1 881 aaKnown RBP12.37□□□□□ -0.43
USP19-204ENST00000398896 CCDC12Q8WUD4 166 aaPredicted RBP12.37□□□□□ -0.43
USP19-204ENST00000398896 JPH2Q9BR39 696 aaPredicted RBP12.37□□□□□ -0.43
USP19-204ENST00000398896 EIF2AK4Q9P2K8 1649 aaKnown RBP12.36□□□□□ -0.43
USP19-204ENST00000398896 CORO7P57737 925 aa12.36□□□□□ -0.43
USP19-204ENST00000398896 STK3Q13188 491 aa12.36□□□□□ -0.43
USP19-204ENST00000398896 ANKRD1Q15327 319 aa12.36□□□□□ -0.43
USP19-204ENST00000398896 L2HGDHQ9H9P8 463 aa12.36□□□□□ -0.43
USP19-204ENST00000398896 SWT1Q5T5J6 900 aaKnown RBP12.36□□□□□ -0.43
USP19-204ENST00000398896 CCAR1Q8IX12 1150 aaKnown RBP12.36□□□□□ -0.43
USP19-204ENST00000398896 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
USP19-204ENST00000398896 TOP1P11387 765 aaKnown RBP12.36□□□□□ -0.43
USP19-204ENST00000398896 FOSBP53539 338 aa12.36□□□□□ -0.43
USP19-204ENST00000398896 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
USP19-204ENST00000398896 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
USP19-204ENST00000398896 VEZTQ9HBM0 779 aa12.36□□□□□ -0.43
USP19-204ENST00000398896 INPP5BP32019 993 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 RABGGTAQ92696 567 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 CRACR2AQ9BSW2 395 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 PARD6BQ9BYG5 372 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 NR1I2O75469 434 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 AP1ARQ63HQ0 302 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 PRPF40BQ6NWY9 871 aaKnown RBP12.35□□□□□ -0.43
USP19-204ENST00000398896 GPATCH3Q96I76 525 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 ZNF396Q96N95 335 aaPredicted RBP12.35□□□□□ -0.43
USP19-204ENST00000398896 MEIS3Q99687 375 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 IL1RAPL2Q9NP60 686 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 CPSF2Q9P2I0 782 aaKnown RBP12.35□□□□□ -0.43
USP19-204ENST00000398896 PRDM15P57071 1507 aaPredicted RBP12.35□□□□□ -0.43
USP19-204ENST00000398896 GNAI3P08754 354 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
USP19-204ENST00000398896 HSPA4P34932 840 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 SARM1Q6SZW1 724 aa12.35□□□□□ -0.43
USP19-204ENST00000398896 LEO1Q8WVC0 666 aaPredicted RBP12.35□□□□□ -0.43
USP19-204ENST00000398896 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
USP19-204ENST00000398896 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 FAN1Q9Y2M0 1017 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 PHLPP2Q6ZVD8 1323 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 CCDC151A5D8V7 595 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 SEMA3FQ13275 785 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 ISM2Q6H9L7 571 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 PPFIA4O75335 1185 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 ZRANB2O95218 330 aaKnown RBP eCLIP12.34□□□□□ -0.43
USP19-204ENST00000398896 CPA1P15085 419 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 NEDD9Q14511 834 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 AFAP1L1Q8TED9 768 aa12.34□□□□□ -0.43
USP19-204ENST00000398896 ABCC4O15439 1325 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 SLC4A2P04920 1241 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 APOBRQ0VD83 1088 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 CCDC70Q6NSX1 233 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 TICAM2Q86XR7 235 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 SGSM3Q96HU1 749 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 EPC1Q9H2F5 836 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 MBIPQ9NS73 344 aa12.33□□□□□ -0.43
USP19-204ENST00000398896 NOS1P29475 1434 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 SURF6O75683 361 aaKnown RBP12.33□□□□□ -0.44
USP19-204ENST00000398896 TBC1D8O95759 1140 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 SCP2P22307 547 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 RUFY1Q96T51 708 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 PUF60Q9UHX1 559 aaKnown RBP12.33□□□□□ -0.44
USP19-204ENST00000398896 SNX14Q9Y5W7 946 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 HMGXB3Q12766 1538 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 KIF3CO14782 793 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 KIF5CO60282 957 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 RAB11FIP3O75154 756 aa12.33□□□□□ -0.44
USP19-204ENST00000398896 TADA3O75528 432 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms