RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 CLIP1P30622 1438 aa10.81□□□□□ -0.68
UBE2D3-204ENST00000349311 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-204ENST00000349311 GAS6Q14393 721 aa10.8□□□□□ -0.68
UBE2D3-204ENST00000349311 ARSJQ5FYB0 599 aaPredicted RBP10.8□□□□□ -0.68
UBE2D3-204ENST00000349311 IER5Q5VY09 327 aa10.8□□□□□ -0.68
UBE2D3-204ENST00000349311 ZNF280CQ8ND82 737 aa10.8□□□□□ -0.68
UBE2D3-204ENST00000349311 TRAIPQ9BWF2 469 aa10.8□□□□□ -0.68
UBE2D3-204ENST00000349311 EFCAB5A4FU69 1503 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 CDC14CA4D256 554 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 EFSO43281 561 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 BNIP3LO60238 219 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 SCNN1AP37088 669 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 KRT76Q01546 638 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 FIGNL1Q6PIW4 674 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 BICDL1Q6ZP65 573 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 GTPBP3Q969Y2 492 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 SAP130Q9H0E3 1048 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 PCDHGC4Q9Y5F7 938 aa10.79□□□□□ -0.68
UBE2D3-204ENST00000349311 FAM157BP0CG42 384 aa10.78□□□□□ -0.68
UBE2D3-204ENST00000349311 HIF1AQ16665 826 aa10.78□□□□□ -0.68
UBE2D3-204ENST00000349311 C11orf91Q3C1V1 193 aa10.78□□□□□ -0.68
UBE2D3-204ENST00000349311 NGLY1Q96IV0 654 aa10.78□□□□□ -0.68
UBE2D3-204ENST00000349311 ANKIB1Q9P2G1 1089 aa10.78□□□□□ -0.68
UBE2D3-204ENST00000349311 SEPT3Q9UH03 358 aa10.78□□□□□ -0.68
UBE2D3-204ENST00000349311 AQRO60306 1485 aaKnown RBP eCLIP10.78□□□□□ -0.682e-7■■■■□ 25.1
UBE2D3-204ENST00000349311 TNFRSF10BO14763 440 aa10.77□□□□□ -0.69
UBE2D3-204ENST00000349311 WIPF1O43516 503 aa10.77□□□□□ -0.69
UBE2D3-204ENST00000349311 TNP2Q05952 138 aa10.77□□□□□ -0.69
UBE2D3-204ENST00000349311 C16orf46Q6P387 395 aa10.77□□□□□ -0.69
UBE2D3-204ENST00000349311 LRRC69Q6ZNQ3 347 aa10.77□□□□□ -0.69
UBE2D3-204ENST00000349311 VTI1AQ96AJ9 217 aa10.77□□□□□ -0.69
UBE2D3-204ENST00000349311 MKNK1Q9BUB5 465 aa10.77□□□□□ -0.69
UBE2D3-204ENST00000349311 ATXN7L1Q9ULK2 861 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-204ENST00000349311 TGFBR3LH3BV60 316 aa10.76□□□□□ -0.69
UBE2D3-204ENST00000349311 GMPRP36959 345 aa10.76□□□□□ -0.69
UBE2D3-204ENST00000349311 RNFT1Q5M7Z0 435 aa10.76□□□□□ -0.69
UBE2D3-204ENST00000349311 TXNDC2Q86VQ3 553 aa10.76□□□□□ -0.69
UBE2D3-204ENST00000349311 HSH2DQ96JZ2 352 aa10.76□□□□□ -0.69
UBE2D3-204ENST00000349311 SAMD9Q5K651 1589 aa10.76□□□□□ -0.69
UBE2D3-204ENST00000349311 VPS8Q8N3P4 1428 aa10.75□□□□□ -0.69
UBE2D3-204ENST00000349311 GPR25O00155 361 aa10.75□□□□□ -0.69
UBE2D3-204ENST00000349311 ATXN7O15265 892 aaPredicted RBP10.75□□□□□ -0.69
UBE2D3-204ENST00000349311 FAM26DQ5JW98 314 aa10.75□□□□□ -0.69
UBE2D3-204ENST00000349311 B4GALNT3Q6L9W6 998 aa10.75□□□□□ -0.69
UBE2D3-204ENST00000349311 COL25A1Q9BXS0 654 aaPredicted RBP10.75□□□□□ -0.69
UBE2D3-204ENST00000349311 KLK14Q9P0G3 267 aa10.75□□□□□ -0.69
UBE2D3-204ENST00000349311 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
UBE2D3-204ENST00000349311 BRD1O95696 1058 aa10.74□□□□□ -0.69
UBE2D3-204ENST00000349311 KCNQ4P56696 695 aa10.74□□□□□ -0.69
UBE2D3-204ENST00000349311 TYRO3Q06418 890 aa10.74□□□□□ -0.69
UBE2D3-204ENST00000349311 DGKZQ13574 1117 aa10.74□□□□□ -0.69
UBE2D3-204ENST00000349311 LAMC2Q13753 1193 aa10.74□□□□□ -0.69
UBE2D3-204ENST00000349311 FOXR1Q6PIV2 292 aa10.74□□□□□ -0.69
UBE2D3-204ENST00000349311 ARAP1Q96P48 1450 aa10.74□□□□□ -0.69
UBE2D3-204ENST00000349311 MAPTP10636 758 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-204ENST00000349311 NAA30Q147X3 362 aaPredicted RBP10.73□□□□□ -0.69
UBE2D3-204ENST00000349311 FAM182BQ5T319 152 aa10.73□□□□□ -0.69
UBE2D3-204ENST00000349311 BTLAQ7Z6A9 289 aa10.73□□□□□ -0.69
UBE2D3-204ENST00000349311 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
UBE2D3-204ENST00000349311 SNAPC4Q5SXM2 1469 aa10.73□□□□□ -0.69
UBE2D3-204ENST00000349311 IQGAP2Q13576 1575 aa10.73□□□□□ -0.69
UBE2D3-204ENST00000349311 NPR3P17342 541 aa10.72□□□□□ -0.69
UBE2D3-204ENST00000349311 ABHD17AQ96GS6 310 aa10.72□□□□□ -0.69
UBE2D3-204ENST00000349311 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
UBE2D3-204ENST00000349311 MBIPQ9NS73 344 aa10.72□□□□□ -0.69
UBE2D3-204ENST00000349311 PHF24Q9UPV7 400 aa10.72□□□□□ -0.69
UBE2D3-204ENST00000349311 NEFLP07196 543 aa10.71□□□□□ -0.69
UBE2D3-204ENST00000349311 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-204ENST00000349311 ARID4AP29374 1257 aaPredicted RBP10.71□□□□□ -0.69
UBE2D3-204ENST00000349311 GRIN2AQ12879 1464 aa10.71□□□□□ -0.69
UBE2D3-204ENST00000349311 ETFBKMTQ8IXQ9 262 aa10.71□□□□□ -0.69
UBE2D3-204ENST00000349311 HELQQ8TDG4 1101 aa10.71□□□□□ -0.69
UBE2D3-204ENST00000349311 STRN4Q9NRL3 753 aa10.71□□□□□ -0.69
UBE2D3-204ENST00000349311 GNEQ9Y223 722 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-204ENST00000349311 C2CD2LO14523 706 aa10.7□□□□□ -0.7
UBE2D3-204ENST00000349311 LORP23490 312 aaPredicted RBP10.7□□□□□ -0.7
UBE2D3-204ENST00000349311 BRD2P25440 801 aaKnown RBP10.7□□□□□ -0.7
UBE2D3-204ENST00000349311 INPP5BP32019 993 aa10.7□□□□□ -0.7
UBE2D3-204ENST00000349311 GJA3Q9Y6H8 435 aa10.7□□□□□ -0.7
UBE2D3-204ENST00000349311 DNMT3AQ9Y6K1 912 aaPredicted RBP10.7□□□□□ -0.7
UBE2D3-204ENST00000349311 MAP3K1Q13233 1512 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 UGGT2Q9NYU1 1516 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 FANCIQ9NVI1 1328 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 OPLAHO14841 1288 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 SLURP2P0DP57 97 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 FGFR3P22607 806 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 SRSF11Q05519 484 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 GTF3C2Q8WUA4 911 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 IFT43Q96FT9 208 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 NEUROD4Q9HD90 331 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 STIM2Q9P246 746 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 EGFL7Q9UHF1 273 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 CHD1O14646 1710 aa10.69□□□□□ -0.7
UBE2D3-204ENST00000349311 DCDC2BA2VCK2 349 aa10.68□□□□□ -0.7
UBE2D3-204ENST00000349311 MICAL2O94851 1124 aa10.68□□□□□ -0.7
UBE2D3-204ENST00000349311 CTBSQ01459 385 aa10.68□□□□□ -0.7
UBE2D3-204ENST00000349311 ECM1Q16610 540 aa10.68□□□□□ -0.7
UBE2D3-204ENST00000349311 C11orf16Q9NQ32 467 aa10.68□□□□□ -0.7
UBE2D3-204ENST00000349311 KIAA0586Q9BVV6 1533 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms