RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 SASS6Q6UVJ0 657 aa14.9□□□□□ -0.02
LMX1A-202ENST00000342310 NCOA5Q9HCD5 579 aaKnown RBP14.9□□□□□ -0.02
LMX1A-202ENST00000342310 AXIN2Q9Y2T1 843 aa14.9□□□□□ -0.02
LMX1A-202ENST00000342310 SIGLEC1Q9BZZ2 1709 aa14.9□□□□□ -0.02
LMX1A-202ENST00000342310 OTUD7BQ6GQQ9 843 aa14.9□□□□□ -0.02
LMX1A-202ENST00000342310 LARP1Q6PKG0 1096 aaKnown RBP14.9□□□□□ -0.02
LMX1A-202ENST00000342310 LMBR1LQ6UX01 489 aa14.9□□□□□ -0.02
LMX1A-202ENST00000342310 KRT28Q7Z3Y7 464 aa14.9□□□□□ -0.02
LMX1A-202ENST00000342310 CREBRFQ8IUR6 639 aa14.9□□□□□ -0.02
LMX1A-202ENST00000342310 MYO5BQ9ULV0 1848 aa14.9□□□□□ -0.02
LMX1A-202ENST00000342310 RNMTO43148 476 aaKnown RBP14.89□□□□□ -0.03
LMX1A-202ENST00000342310 PI4K2BQ8TCG2 481 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 C16orf45Q96MC5 204 aaPredicted RBP14.89□□□□□ -0.03
LMX1A-202ENST00000342310 DBNDD2Q9BQY9 259 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 NUP62CLQ9H1M0 184 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 TPCN1Q9ULQ1 816 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 ARHGAP31Q2M1Z3 1444 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 RAD50Q92878 1312 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 GOLGA6L19H0YKK7 550 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 ZNF589Q86UQ0 364 aaPredicted RBP14.89□□□□□ -0.03
LMX1A-202ENST00000342310 ZNF496Q96IT1 587 aaPredicted RBP14.89□□□□□ -0.03
LMX1A-202ENST00000342310 BIN1O00499 593 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 TATP17735 454 aaPredicted RBP14.89□□□□□ -0.03
LMX1A-202ENST00000342310 GPTP24298 496 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 ME1P48163 572 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 CCDC144CPQ8IYA2 1237 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 IP6K1Q92551 441 aa14.89□□□□□ -0.03
LMX1A-202ENST00000342310 FTOQ9C0B1 505 aaKnown RBP eCLIP14.89□□□□□ -0.03
LMX1A-202ENST00000342310 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
LMX1A-202ENST00000342310 ANKRD13DQ6ZTN6 518 aa14.88□□□□□ -0.03
LMX1A-202ENST00000342310 SDF4Q9BRK5 362 aa14.88□□□□□ -0.03
LMX1A-202ENST00000342310 PSMA5P28066 241 aa14.88□□□□□ -0.03
LMX1A-202ENST00000342310 HSP90AA4PQ58FG1 418 aa14.88□□□□□ -0.03
LMX1A-202ENST00000342310 LSG1Q9H089 658 aaKnown RBP14.88□□□□□ -0.03
LMX1A-202ENST00000342310 CCDC192P0DO97 292 aa14.88□□□□□ -0.03
LMX1A-202ENST00000342310 LIG1P18858 919 aa14.88□□□□□ -0.03
LMX1A-202ENST00000342310 TOM1L2Q6ZVM7 507 aa14.88□□□□□ -0.03
LMX1A-202ENST00000342310 EVI5LQ96CN4 794 aa14.88□□□□□ -0.03
LMX1A-202ENST00000342310 GIGYF1O75420 1035 aaPredicted RBP14.87□□□□□ -0.03
LMX1A-202ENST00000342310 OFD1O75665 1012 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 ATF3P18847 181 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 PDCL3Q9H2J4 239 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 CRB1P82279 1406 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 ANAPC15P60006 121 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 UBE2HP62256 183 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 CSPP1Q1MSJ5 1256 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 EPHA10Q5JZY3 1008 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 DNAJC25Q9H1X3 360 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 OSBPL3Q9H4L5 887 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 TRMT1Q9NXH9 659 aaKnown RBP14.87□□□□□ -0.03
LMX1A-202ENST00000342310 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 CYP2E1P05181 493 aaPredicted RBP14.87□□□□□ -0.03
LMX1A-202ENST00000342310 RXRAP19793 462 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 AKAP4Q5JQC9 854 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 CCDC171Q6TFL3 1326 aa14.87□□□□□ -0.03
LMX1A-202ENST00000342310 CPLX1O14810 134 aa14.86□□□□□ -0.03
LMX1A-202ENST00000342310 Q6ZUG5 572 aa14.86□□□□□ -0.03
LMX1A-202ENST00000342310 ERC1Q8IUD2 1116 aa14.86□□□□□ -0.03
LMX1A-202ENST00000342310 PPP1R9BQ96SB3 815 aa14.86□□□□□ -0.03
LMX1A-202ENST00000342310 NOL7Q9UMY1 257 aaKnown RBP14.86□□□□□ -0.03
LMX1A-202ENST00000342310 TBX22Q9Y458 520 aa14.86□□□□□ -0.03
LMX1A-202ENST00000342310 EVA1CP58658 441 aa14.86□□□□□ -0.03
LMX1A-202ENST00000342310 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.86□□□□□ -0.03
LMX1A-202ENST00000342310 V9GYY5 206 aaPredicted RBP14.86□□□□□ -0.03
LMX1A-202ENST00000342310 APOBRQ0VD83 1088 aa14.86□□□□□ -0.03
LMX1A-202ENST00000342310 MAP3K11Q16584 847 aa14.86□□□□□ -0.03
LMX1A-202ENST00000342310 PTGS1P23219 599 aa14.85□□□□□ -0.03
LMX1A-202ENST00000342310 ANO6Q4KMQ2 910 aa14.85□□□□□ -0.03
LMX1A-202ENST00000342310 HDAC5Q9UQL6 1122 aa14.85□□□□□ -0.03
LMX1A-202ENST00000342310 SLC27A2O14975 620 aa14.85□□□□□ -0.03
LMX1A-202ENST00000342310 SASH1O94885 1247 aa14.85□□□□□ -0.03
LMX1A-202ENST00000342310 KCNH5Q8NCM2 988 aa14.85□□□□□ -0.03
LMX1A-202ENST00000342310 LINS1Q8NG48 757 aa14.85□□□□□ -0.03
LMX1A-202ENST00000342310 HYPKQ9NX55 129 aa14.85□□□□□ -0.03
LMX1A-202ENST00000342310 A1BGP04217 495 aa14.84□□□□□ -0.03
LMX1A-202ENST00000342310 RRP12Q5JTH9 1297 aaKnown RBP14.84□□□□□ -0.03
LMX1A-202ENST00000342310 RGS12O14924 1447 aa14.84□□□□□ -0.03
LMX1A-202ENST00000342310 LRMPQ12912 555 aa14.84□□□□□ -0.03
LMX1A-202ENST00000342310 NOLC1Q14978 699 aaKnown RBP eCLIP14.84□□□□□ -0.03
LMX1A-202ENST00000342310 CCDC186Q7Z3E2 898 aa14.84□□□□□ -0.03
LMX1A-202ENST00000342310 INTS4Q96HW7 963 aaKnown RBP14.84□□□□□ -0.03
LMX1A-202ENST00000342310 ADGRB2O60241 1585 aa14.84□□□□□ -0.03
LMX1A-202ENST00000342310 ZNF790Q6PG37 636 aa14.84□□□□□ -0.03
LMX1A-202ENST00000342310 TTC6Q86TZ1 520 aa14.84□□□□□ -0.03
LMX1A-202ENST00000342310 PRDM11Q9NQV5 511 aa14.83□□□□□ -0.03
LMX1A-202ENST00000342310 MTMR6Q9Y217 621 aa14.83□□□□□ -0.03
LMX1A-202ENST00000342310 NCOA3Q9Y6Q9 1424 aa14.83□□□□□ -0.04
LMX1A-202ENST00000342310 ARHGEF10O15013 1369 aa14.83□□□□□ -0.04
LMX1A-202ENST00000342310 TTLL5Q6EMB2 1281 aa14.83□□□□□ -0.04
LMX1A-202ENST00000342310 FAM177A1Q8N128 213 aaPredicted RBP14.83□□□□□ -0.04
LMX1A-202ENST00000342310 NEK1Q96PY6 1258 aa14.83□□□□□ -0.04
LMX1A-202ENST00000342310 CHMP4AQ9BY43 222 aa14.83□□□□□ -0.04
LMX1A-202ENST00000342310 GOLGA6L6A8MZA4 724 aa14.83□□□□□ -0.04
LMX1A-202ENST00000342310 STAP2Q9UGK3 403 aa14.83□□□□□ -0.04
LMX1A-202ENST00000342310 CUL4AQ13619 759 aa14.82□□□□□ -0.04
LMX1A-202ENST00000342310 MTMR7Q9Y216 660 aa14.82□□□□□ -0.04
LMX1A-202ENST00000342310 PTPN21Q16825 1174 aa14.82□□□□□ -0.04
LMX1A-202ENST00000342310 TPD52L1Q16890 204 aaPredicted RBP14.82□□□□□ -0.04
LMX1A-202ENST00000342310 CCDC73Q6ZRK6 1079 aa14.82□□□□□ -0.04
LMX1A-202ENST00000342310 NRBP1Q9UHY1 535 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms