RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 MAP3K11Q16584 847 aa15.88■□□□□ 0.13
TMEM248-201ENST00000341567 SKIDA1Q1XH10 827 aa15.88■□□□□ 0.13
TMEM248-201ENST00000341567 PPP4R3BQ5MIZ7 849 aa15.88■□□□□ 0.13
TMEM248-201ENST00000341567 PODXL2Q9NZ53 605 aa15.88■□□□□ 0.13
TMEM248-201ENST00000341567 ANKRD1Q15327 319 aa15.87■□□□□ 0.13
TMEM248-201ENST00000341567 ZNF594Q96JF6 807 aaPredicted RBP15.87■□□□□ 0.13
TMEM248-201ENST00000341567 USP16Q9Y5T5 823 aa15.87■□□□□ 0.13
TMEM248-201ENST00000341567 TRPM2O94759 1503 aa15.87■□□□□ 0.13
TMEM248-201ENST00000341567 MAP3K4Q9Y6R4 1608 aa15.87■□□□□ 0.13
TMEM248-201ENST00000341567 RBM8AQ9Y5S9 174 aaKnown RBP15.87■□□□□ 0.13
TMEM248-201ENST00000341567 GJB2P29033 226 aa15.87■□□□□ 0.13
TMEM248-201ENST00000341567 TEX35Q5T0J7 233 aa15.87■□□□□ 0.13
TMEM248-201ENST00000341567 BRF1Q92994 677 aa15.87■□□□□ 0.13
TMEM248-201ENST00000341567 TRIM34Q9BYJ4 488 aa15.87■□□□□ 0.13
TMEM248-201ENST00000341567 TFCP2Q12800 502 aa15.86■□□□□ 0.13
TMEM248-201ENST00000341567 TRMT1Q9NXH9 659 aaKnown RBP15.86■□□□□ 0.13
TMEM248-201ENST00000341567 OFD1O75665 1012 aa15.86■□□□□ 0.13
TMEM248-201ENST00000341567 IMMTQ16891 758 aaKnown RBP15.86■□□□□ 0.13
TMEM248-201ENST00000341567 CHMLP26374 656 aa15.86■□□□□ 0.13
TMEM248-201ENST00000341567 TRERF1Q96PN7 1200 aa15.86■□□□□ 0.13
TMEM248-201ENST00000341567 SOS1Q07889 1333 aaPredicted RBP15.86■□□□□ 0.13
TMEM248-201ENST00000341567 UNC13BO14795 1591 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 NMIQ13287 307 aaPredicted RBP15.85■□□□□ 0.13
TMEM248-201ENST00000341567 PROSER3Q2NL68 480 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 USP44Q9H0E7 712 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 IL2RBP14784 551 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 CCDC24Q8N4L8 307 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 NACAP1Q9BZK3 213 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 NAT10Q9H0A0 1025 aaKnown RBP15.85■□□□□ 0.13
TMEM248-201ENST00000341567 DDX21Q9NR30 783 aaKnown RBP eCLIP15.85■□□□□ 0.13
TMEM248-201ENST00000341567 GNL3LQ9NVN8 582 aaKnown RBP15.85■□□□□ 0.13
TMEM248-201ENST00000341567 ARGLU1Q9NWB6 273 aaPredicted RBP15.85■□□□□ 0.13
TMEM248-201ENST00000341567 JAG2Q9Y219 1238 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 CNPY2Q9Y2B0 182 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
TMEM248-201ENST00000341567 ANKRD18BA2A2Z9 1011 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 CCDC69A6NI79 296 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 BRPF1P55201 1214 aaPredicted RBP15.85■□□□□ 0.13
TMEM248-201ENST00000341567 IKQ13123 557 aaPredicted RBP15.85■□□□□ 0.13
TMEM248-201ENST00000341567 C8orf37Q96NL8 207 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 USP26Q9BXU7 913 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 DNAJC5Q9H3Z4 198 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 WWC3Q9ULE0 1092 aa15.85■□□□□ 0.13
TMEM248-201ENST00000341567 EIF4A1P60842 406 aaKnown RBP15.84■□□□□ 0.13
TMEM248-201ENST00000341567 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
TMEM248-201ENST00000341567 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
TMEM248-201ENST00000341567 USP48Q86UV5 1035 aa15.84■□□□□ 0.13
TMEM248-201ENST00000341567 GSPT1P15170 499 aaKnown RBP15.84■□□□□ 0.13
TMEM248-201ENST00000341567 ZSCAN31Q96LW9 406 aaPredicted RBP15.84■□□□□ 0.13
TMEM248-201ENST00000341567 NAPBQ9H115 298 aa15.84■□□□□ 0.13
TMEM248-201ENST00000341567 STX6O43752 255 aa15.83■□□□□ 0.13
TMEM248-201ENST00000341567 C17orf53Q8N3J3 647 aaPredicted RBP15.83■□□□□ 0.13
TMEM248-201ENST00000341567 DYNC1I1O14576 645 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 POLR3DP05423 398 aaPredicted RBP15.83■□□□□ 0.12
TMEM248-201ENST00000341567 KRT32Q14532 448 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 SIRT1Q96EB6 747 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 PCMTD1Q96MG8 357 aaPredicted RBP15.83■□□□□ 0.12
TMEM248-201ENST00000341567 UBAC1Q9BSL1 405 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 AKAP2Q9Y2D5 859 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 NOLC1Q14978 699 aaKnown RBP eCLIP15.83■□□□□ 0.12
TMEM248-201ENST00000341567 KIDINS220Q9ULH0 1771 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 ATP6V1AP38606 617 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 RBM25P49756 843 aaKnown RBP15.83■□□□□ 0.12
TMEM248-201ENST00000341567 MICU3Q86XE3 530 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 TSC1Q92574 1164 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 SUCLG2Q96I99 432 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 DCAF5Q96JK2 942 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 CTNNA3Q9UI47 895 aa15.83■□□□□ 0.12
TMEM248-201ENST00000341567 INSRP06213 1382 aa15.82■□□□□ 0.12
TMEM248-201ENST00000341567 ALDH1L1O75891 902 aa15.82■□□□□ 0.12
TMEM248-201ENST00000341567 FAM227BQ96M60 508 aa15.82■□□□□ 0.12
TMEM248-201ENST00000341567 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
TMEM248-201ENST00000341567 ZNF213O14771 459 aa15.82■□□□□ 0.12
TMEM248-201ENST00000341567 ZPR1O75312 459 aa15.82■□□□□ 0.12
TMEM248-201ENST00000341567 TNNT1P13805 278 aa15.82■□□□□ 0.12
TMEM248-201ENST00000341567 IQGAP3Q86VI3 1631 aa15.82■□□□□ 0.12
TMEM248-201ENST00000341567 GPS2Q13227 327 aa15.82■□□□□ 0.12
TMEM248-201ENST00000341567 DBNDD2Q9BQY9 259 aa15.82■□□□□ 0.12
TMEM248-201ENST00000341567 SETD1BQ9UPS6 1966 aaKnown RBP15.81■□□□□ 0.12
TMEM248-201ENST00000341567 RANBP6O60518 1105 aaKnown RBP15.81■□□□□ 0.12
TMEM248-201ENST00000341567 PKP1Q13835 747 aa15.81■□□□□ 0.12
TMEM248-201ENST00000341567 FAM173BQ6P4H8 233 aa15.81■□□□□ 0.12
TMEM248-201ENST00000341567 NEK1Q96PY6 1258 aa15.81■□□□□ 0.12
TMEM248-201ENST00000341567 ANKIB1Q9P2G1 1089 aa15.81■□□□□ 0.12
TMEM248-201ENST00000341567 CGNQ9P2M7 1197 aaKnown RBP15.81■□□□□ 0.12
TMEM248-201ENST00000341567 ISM2Q6H9L7 571 aa15.81■□□□□ 0.12
TMEM248-201ENST00000341567 AK2P54819 239 aa15.8■□□□□ 0.12
TMEM248-201ENST00000341567 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
TMEM248-201ENST00000341567 NOC3LQ8WTT2 800 aaKnown RBP15.8■□□□□ 0.12
TMEM248-201ENST00000341567 KDM5AP29375 1690 aaKnown RBP15.8■□□□□ 0.12
TMEM248-201ENST00000341567 GOLGA8BA8MQT2 603 aa15.8■□□□□ 0.12
TMEM248-201ENST00000341567 UBAP1LF5GYI3 381 aa15.8■□□□□ 0.12
TMEM248-201ENST00000341567 SERPINC1P01008 464 aa15.8■□□□□ 0.12
TMEM248-201ENST00000341567 TPM1P09493 284 aa15.8■□□□□ 0.12
TMEM248-201ENST00000341567 RBM5P52756 815 aaKnown RBP eCLIP15.8■□□□□ 0.12
TMEM248-201ENST00000341567 DDB1Q16531 1140 aa15.8■□□□□ 0.12
TMEM248-201ENST00000341567 TRIM22Q8IYM9 498 aa15.8■□□□□ 0.12
TMEM248-201ENST00000341567 CLTCL1P53675 1640 aa15.8■□□□□ 0.12
TMEM248-201ENST00000341567 ZNF396Q96N95 335 aaPredicted RBP15.79■□□□□ 0.12
TMEM248-201ENST00000341567 CCDC66A2RUB6 948 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms