RNA–Protein interactions for RNA: ENST00000339180.8

CMTM5-201, Transcript of CKLF like MARVEL transmembrane domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene CMTM5, Length 1,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM5-201ENST00000339180 PPP1R42Q7Z4L9 355 aa18.03■□□□□ 0.48
CMTM5-201ENST00000339180 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
CMTM5-201ENST00000339180 PSMD1Q99460 953 aa18.03■□□□□ 0.48
CMTM5-201ENST00000339180 SNED1Q8TER0 1413 aa18.03■□□□□ 0.48
CMTM5-201ENST00000339180 ZNF541Q9H0D2 1346 aa18.02■□□□□ 0.48
CMTM5-201ENST00000339180 NTSR2O95665 410 aa18.02■□□□□ 0.48
CMTM5-201ENST00000339180 POTEIP0CG38 1075 aa18.02■□□□□ 0.48
CMTM5-201ENST00000339180 POTEJP0CG39 1038 aa18.02■□□□□ 0.48
CMTM5-201ENST00000339180 LDHDQ86WU2 507 aa18.02■□□□□ 0.48
CMTM5-201ENST00000339180 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
CMTM5-201ENST00000339180 TAF1DQ9H5J8 278 aaPredicted RBP18.02■□□□□ 0.48
CMTM5-201ENST00000339180 HOXA10P31260 410 aaPredicted RBP18.01■□□□□ 0.47
CMTM5-201ENST00000339180 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
CMTM5-201ENST00000339180 JDP2Q8WYK2 163 aa18.01■□□□□ 0.47
CMTM5-201ENST00000339180 HACL1Q9UJ83 578 aa18.01■□□□□ 0.47
CMTM5-201ENST00000339180 TRIM35Q9UPQ4 493 aa18.01■□□□□ 0.47
CMTM5-201ENST00000339180 CRAMP1Q96RY5 1269 aa18■□□□□ 0.47
CMTM5-201ENST00000339180 CREBZFQ9NS37 354 aa18■□□□□ 0.47
CMTM5-201ENST00000339180 LRRC37AA6NMS7 1700 aa18■□□□□ 0.47
CMTM5-201ENST00000339180 FZD9O00144 591 aa17.99■□□□□ 0.47
CMTM5-201ENST00000339180 PPEF1O14829 653 aaPredicted RBP17.99■□□□□ 0.47
CMTM5-201ENST00000339180 WDR43Q15061 677 aaKnown RBP eCLIP17.99■□□□□ 0.47
CMTM5-201ENST00000339180 PDIA6Q15084 440 aa17.99■□□□□ 0.47
CMTM5-201ENST00000339180 EAPPQ56P03 285 aaPredicted RBP17.99■□□□□ 0.47
CMTM5-201ENST00000339180 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
CMTM5-201ENST00000339180 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
CMTM5-201ENST00000339180 NLRP3Q96P20 1036 aa17.99■□□□□ 0.47
CMTM5-201ENST00000339180 UTP14AQ9BVJ6 771 aaKnown RBP17.99■□□□□ 0.47
CMTM5-201ENST00000339180 ADAMTS8Q9UP79 889 aa17.99■□□□□ 0.47
CMTM5-201ENST00000339180 RNF123Q5XPI4 1314 aa17.98■□□□□ 0.47
CMTM5-201ENST00000339180 ANXA1P04083 346 aa17.98■□□□□ 0.47
CMTM5-201ENST00000339180 EIF6P56537 245 aaKnown RBP17.98■□□□□ 0.47
CMTM5-201ENST00000339180 NEUROD2Q15784 382 aa17.98■□□□□ 0.47
CMTM5-201ENST00000339180 PROSER3Q2NL68 480 aa17.98■□□□□ 0.47
CMTM5-201ENST00000339180 GPC2Q8N158 579 aa17.98■□□□□ 0.47
CMTM5-201ENST00000339180 TMX4Q9H1E5 349 aaPredicted RBP17.98■□□□□ 0.47
CMTM5-201ENST00000339180 CLEC11AQ9Y240 323 aa17.98■□□□□ 0.47
CMTM5-201ENST00000339180 HSPA1AP0DMV8 641 aaKnown RBP17.97■□□□□ 0.47
CMTM5-201ENST00000339180 HSPA1BP0DMV9 641 aaKnown RBP17.97■□□□□ 0.47
CMTM5-201ENST00000339180 EPHX2P34913 555 aa17.97■□□□□ 0.47
CMTM5-201ENST00000339180 KRT24Q2M2I5 525 aa17.97■□□□□ 0.47
CMTM5-201ENST00000339180 PNMA8AQ86V59 439 aaPredicted RBP17.97■□□□□ 0.47
CMTM5-201ENST00000339180 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
CMTM5-201ENST00000339180 NECTIN2Q92692 538 aa17.96■□□□□ 0.47
CMTM5-201ENST00000339180 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.47
CMTM5-201ENST00000339180 COL4A5P29400 1685 aa17.96■□□□□ 0.47
CMTM5-201ENST00000339180 PASKQ96RG2 1323 aa17.96■□□□□ 0.46
CMTM5-201ENST00000339180 TCERG1O14776 1098 aaKnown RBP17.95■□□□□ 0.46
CMTM5-201ENST00000339180 AIMP1Q12904 312 aaKnown RBP17.95■□□□□ 0.46
CMTM5-201ENST00000339180 SLC10A5Q5PT55 438 aa17.95■□□□□ 0.46
CMTM5-201ENST00000339180 C3orf67Q6ZVT6 689 aa17.95■□□□□ 0.46
CMTM5-201ENST00000339180 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
CMTM5-201ENST00000339180 XAGE3Q8WTP9 111 aa17.95■□□□□ 0.46
CMTM5-201ENST00000339180 DDX21Q9NR30 783 aaKnown RBP eCLIP17.95■□□□□ 0.46
CMTM5-201ENST00000339180 MKRN1Q9UHC7 482 aaKnown RBP17.95■□□□□ 0.46
CMTM5-201ENST00000339180 LAS1LQ9Y4W2 734 aaKnown RBP17.95■□□□□ 0.46
CMTM5-201ENST00000339180 COL4A1P02462 1669 aa17.95■□□□□ 0.46
CMTM5-201ENST00000339180 CACNA1FO60840 1977 aa17.95■□□□□ 0.46
CMTM5-201ENST00000339180 CHL1O00533 1208 aa17.94■□□□□ 0.46
CMTM5-201ENST00000339180 LMOD1P29536 600 aaPredicted RBP17.94■□□□□ 0.46
CMTM5-201ENST00000339180 COL13A1Q5TAT6 717 aaPredicted RBP17.94■□□□□ 0.46
CMTM5-201ENST00000339180 GJA3Q9Y6H8 435 aa17.94■□□□□ 0.46
CMTM5-201ENST00000339180 MYH3P11055 1940 aa17.94■□□□□ 0.46
CMTM5-201ENST00000339180 NLRP10Q86W26 655 aa17.93■□□□□ 0.46
CMTM5-201ENST00000339180 NIM1KQ8IY84 436 aa17.93■□□□□ 0.46
CMTM5-201ENST00000339180 ATP6V0A2Q9Y487 856 aa17.93■□□□□ 0.46
CMTM5-201ENST00000339180 ABCC4O15439 1325 aa17.93■□□□□ 0.46
CMTM5-201ENST00000339180 CNTNAP1P78357 1384 aa17.92■□□□□ 0.46
CMTM5-201ENST00000339180 LTBP1Q14766 1721 aa17.92■□□□□ 0.46
CMTM5-201ENST00000339180 TMEM88BA6NKF7 163 aa17.92■□□□□ 0.46
CMTM5-201ENST00000339180 PPIP5K2O43314 1243 aa17.92■□□□□ 0.46
CMTM5-201ENST00000339180 HOXB7P09629 217 aa17.92■□□□□ 0.46
CMTM5-201ENST00000339180 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
CMTM5-201ENST00000339180 CCDC184Q52MB2 194 aa17.92■□□□□ 0.46
CMTM5-201ENST00000339180 SUPT20HQ8NEM7 779 aa17.92■□□□□ 0.46
CMTM5-201ENST00000339180 ITGBL1O95965 494 aaPredicted RBP17.91■□□□□ 0.46
CMTM5-201ENST00000339180 HDGFL1Q5TGJ6 251 aa17.91■□□□□ 0.46
CMTM5-201ENST00000339180 SLC51AQ86UW1 340 aa17.91■□□□□ 0.46
CMTM5-201ENST00000339180 TNS4Q8IZW8 715 aa17.91■□□□□ 0.46
CMTM5-201ENST00000339180 VPS33BQ9H267 617 aa17.91■□□□□ 0.46
CMTM5-201ENST00000339180 TRMT112Q9UI30 125 aaKnown RBP17.91■□□□□ 0.46
CMTM5-201ENST00000339180 SH3TC1Q8TE82 1336 aa17.91■□□□□ 0.46
CMTM5-201ENST00000339180 SPEF2Q9C093 1822 aa17.91■□□□□ 0.46
CMTM5-201ENST00000339180 BBOX1O75936 387 aa17.9■□□□□ 0.46
CMTM5-201ENST00000339180 DDX46Q7L014 1031 aaKnown RBP17.9■□□□□ 0.46
CMTM5-201ENST00000339180 CNTROBQ8N137 903 aa17.9■□□□□ 0.46
CMTM5-201ENST00000339180 CHPF2Q9P2E5 772 aa17.9■□□□□ 0.46
CMTM5-201ENST00000339180 PCNTO95613 3336 aa17.89■□□□□ 0.45
CMTM5-201ENST00000339180 DUOX1Q9NRD9 1551 aa17.89■□□□□ 0.45
CMTM5-201ENST00000339180 HCLS1P14317 486 aaPredicted RBP17.89■□□□□ 0.45
CMTM5-201ENST00000339180 AOC3Q16853 763 aa17.89■□□□□ 0.45
CMTM5-201ENST00000339180 MAP1SQ66K74 1059 aaPredicted RBP17.89■□□□□ 0.45
CMTM5-201ENST00000339180 ZNF853P0CG23 659 aa17.88■□□□□ 0.45
CMTM5-201ENST00000339180 SCNN1DP51172 638 aa17.88■□□□□ 0.45
CMTM5-201ENST00000339180 DPP8Q6V1X1 898 aaPredicted RBP17.88■□□□□ 0.45
CMTM5-201ENST00000339180 SP8Q8IXZ3 490 aa17.88■□□□□ 0.45
CMTM5-201ENST00000339180 PLBD2Q8NHP8 589 aa17.88■□□□□ 0.45
CMTM5-201ENST00000339180 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
CMTM5-201ENST00000339180 DBF4Q9UBU7 674 aaPredicted RBP17.88■□□□□ 0.45
CMTM5-201ENST00000339180 APAF1O14727 1248 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms