RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 PSMD1Q99460 953 aa32.87■■■□□ 2.85
PPP4R4-202ENST00000328839 CREBZFQ9NS37 354 aa32.87■■■□□ 2.85
PPP4R4-202ENST00000328839 HACL1Q9UJ83 578 aa32.87■■■□□ 2.85
PPP4R4-202ENST00000328839 TCERG1O14776 1098 aaKnown RBP32.86■■■□□ 2.85
PPP4R4-202ENST00000328839 ANXA1P04083 346 aa32.86■■■□□ 2.85
PPP4R4-202ENST00000328839 RBM17Q96I25 401 aaKnown RBP32.86■■■□□ 2.85
PPP4R4-202ENST00000328839 HSPA1AP0DMV8 641 aaKnown RBP32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 HSPA1BP0DMV9 641 aaKnown RBP32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 HOXA10P31260 410 aaPredicted RBP32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 NEUROD2Q15784 382 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 CC2D2BQ6DHV5 1058 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 CCDC146Q8IYE0 955 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 NECTIN2Q92692 538 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 CLEC11AQ9Y240 323 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 ANKRD36CQ5JPF3 1778 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 SNED1Q8TER0 1413 aa32.85■■■□□ 2.85
PPP4R4-202ENST00000328839 RNF123Q5XPI4 1314 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 FZD9O00144 591 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 DDX10Q13206 875 aaKnown RBP32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 PDIA6Q15084 440 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 PROSER3Q2NL68 480 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 PARP10Q53GL7 1025 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 BABAM1Q9NWV8 329 aa32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 MKRN1Q9UHC7 482 aaKnown RBP32.84■■■□□ 2.85
PPP4R4-202ENST00000328839 PPEF1O14829 653 aaPredicted RBP32.83■■■□□ 2.85
PPP4R4-202ENST00000328839 MYBBP1AQ9BQG0 1328 aaKnown RBP32.82■■■□□ 2.84
PPP4R4-202ENST00000328839 EPHX2P34913 555 aa32.82■■■□□ 2.84
PPP4R4-202ENST00000328839 C3orf67Q6ZVT6 689 aa32.82■■■□□ 2.84
PPP4R4-202ENST00000328839 LRP10Q7Z4F1 713 aa32.82■■■□□ 2.84
PPP4R4-202ENST00000328839 GPC2Q8N158 579 aa32.81■■■□□ 2.84
PPP4R4-202ENST00000328839 NLRP3Q96P20 1036 aa32.81■■■□□ 2.84
PPP4R4-202ENST00000328839 CRAMP1Q96RY5 1269 aa32.81■■■□□ 2.84
PPP4R4-202ENST00000328839 UTP14AQ9BVJ6 771 aaKnown RBP32.81■■■□□ 2.84
PPP4R4-202ENST00000328839 EIF6P56537 245 aaKnown RBP32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 AIMP1Q12904 312 aaKnown RBP32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 SLC51AQ86UW1 340 aa32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 LAS1LQ9Y4W2 734 aaKnown RBP32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 GJA3Q9Y6H8 435 aa32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 COL4A5P29400 1685 aa32.8■■■□□ 2.84
PPP4R4-202ENST00000328839 ADAMTSL1Q8N6G6 1762 aa32.79■■■□□ 2.84
PPP4R4-202ENST00000328839 PASKQ96RG2 1323 aa32.78■■■□□ 2.84
PPP4R4-202ENST00000328839 LAMB2P55268 1798 aa32.78■■■□□ 2.84
PPP4R4-202ENST00000328839 GRIPAP1Q4V328 841 aa32.78■■■□□ 2.84
PPP4R4-202ENST00000328839 LARGE2Q8N3Y3 721 aa32.78■■■□□ 2.84
PPP4R4-202ENST00000328839 WDR43Q15061 677 aaKnown RBP eCLIP32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 COPS6Q7L5N1 327 aa32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 PNMA8AQ86V59 439 aaPredicted RBP32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 XAGE3Q8WTP9 111 aa32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 TMX4Q9H1E5 349 aaPredicted RBP32.77■■■□□ 2.84
PPP4R4-202ENST00000328839 TNS4Q8IZW8 715 aa32.75■■■□□ 2.83
PPP4R4-202ENST00000328839 KRT24Q2M2I5 525 aa32.74■■■□□ 2.83
PPP4R4-202ENST00000328839 HSP90AB3PQ58FF7 597 aa32.74■■■□□ 2.83
PPP4R4-202ENST00000328839 ITGBL1O95965 494 aaPredicted RBP32.73■■■□□ 2.83
PPP4R4-202ENST00000328839 LMOD1P29536 600 aaPredicted RBP32.73■■■□□ 2.83
PPP4R4-202ENST00000328839 MAP1SQ66K74 1059 aaPredicted RBP32.73■■■□□ 2.83
PPP4R4-202ENST00000328839 RUNDC1Q96C34 613 aa32.73■■■□□ 2.83
PPP4R4-202ENST00000328839 CNTNAP1P78357 1384 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 TMEM88BA6NKF7 163 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 SLC10A5Q5PT55 438 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 NIM1KQ8IY84 436 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 ABCC4O15439 1325 aa32.72■■■□□ 2.83
PPP4R4-202ENST00000328839 CHL1O00533 1208 aa32.71■■■□□ 2.83
PPP4R4-202ENST00000328839 PPIP5K2O43314 1243 aa32.71■■■□□ 2.83
PPP4R4-202ENST00000328839 DDX21Q9NR30 783 aaKnown RBP eCLIP32.71■■■□□ 2.83
PPP4R4-202ENST00000328839 LTBP1Q14766 1721 aa32.71■■■□□ 2.83
PPP4R4-202ENST00000328839 HCLS1P14317 486 aaPredicted RBP32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 NLRP10Q86W26 655 aa32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 CNTROBQ8N137 903 aa32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 TRIM35Q9UPQ4 493 aa32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 ATP6V0A2Q9Y487 856 aa32.7■■■□□ 2.83
PPP4R4-202ENST00000328839 CAPN15O75808 1086 aa32.69■■■□□ 2.82
PPP4R4-202ENST00000328839 CHPF2Q9P2E5 772 aa32.69■■■□□ 2.82
PPP4R4-202ENST00000328839 TRMT112Q9UI30 125 aaKnown RBP32.69■■■□□ 2.82
PPP4R4-202ENST00000328839 TCIRG1Q13488 830 aa32.68■■■□□ 2.82
PPP4R4-202ENST00000328839 AOC3Q16853 763 aa32.68■■■□□ 2.82
PPP4R4-202ENST00000328839 ZNF428Q96B54 188 aa32.68■■■□□ 2.82
PPP4R4-202ENST00000328839 TAF1P21675 1872 aa32.67■■■□□ 2.82
PPP4R4-202ENST00000328839 HDGFL1Q5TGJ6 251 aa32.67■■■□□ 2.82
PPP4R4-202ENST00000328839 ADAMTS8Q9UP79 889 aa32.66■■■□□ 2.82
PPP4R4-202ENST00000328839 SH3TC1Q8TE82 1336 aa32.66■■■□□ 2.82
PPP4R4-202ENST00000328839 SCNN1DP51172 638 aa32.65■■■□□ 2.82
PPP4R4-202ENST00000328839 EPS15P42566 896 aa32.64■■■□□ 2.82
PPP4R4-202ENST00000328839 DDX46Q7L014 1031 aaKnown RBP32.64■■■□□ 2.82
PPP4R4-202ENST00000328839 SUPT20HQ8NEM7 779 aa32.64■■■□□ 2.82
PPP4R4-202ENST00000328839 BBOX1O75936 387 aa32.63■■■□□ 2.81
PPP4R4-202ENST00000328839 VEGFBP49765 207 aa32.63■■■□□ 2.81
PPP4R4-202ENST00000328839 DPP8Q6V1X1 898 aaPredicted RBP32.63■■■□□ 2.81
PPP4R4-202ENST00000328839 DDX60Q8IY21 1712 aaKnown RBP32.62■■■□□ 2.81
PPP4R4-202ENST00000328839 SP8Q8IXZ3 490 aa32.61■■■□□ 2.81
PPP4R4-202ENST00000328839 VPS33BQ9H267 617 aa32.61■■■□□ 2.81
PPP4R4-202ENST00000328839 MPNDQ8N594 471 aa32.6■■■□□ 2.81
PPP4R4-202ENST00000328839 ABT1Q9ULW3 272 aaKnown RBP32.6■■■□□ 2.81
PPP4R4-202ENST00000328839 HOXB7P09629 217 aa32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 GRAPQ13588 217 aa32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 PLBD2Q8NHP8 589 aa32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 GRAPLQ8TC17 118 aaPredicted RBP32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 DBF4Q9UBU7 674 aaPredicted RBP32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 ZNRF3Q9ULT6 936 aa32.59■■■□□ 2.81
PPP4R4-202ENST00000328839 ANKRD13DQ6ZTN6 518 aa32.58■■■□□ 2.81
PPP4R4-202ENST00000328839 USP50Q70EL3 339 aaPredicted RBP32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms