RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 KIF3BO15066 747 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 BPNT1O95861 308 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 TCEA2Q15560 299 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 TAF1CQ15572 869 aaPredicted RBP3.49□□□□□ -1.85
CHD1-201ENST00000284049 MEI1Q5TIA1 1274 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 SAMD7Q7Z3H4 446 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 METTL16Q86W50 562 aaKnown RBP3.49□□□□□ -1.85
CHD1-201ENST00000284049 MRPL50Q8N5N7 158 aaKnown RBP3.49□□□□□ -1.85
CHD1-201ENST00000284049 SRRTQ9BXP5 876 aaKnown RBP3.49□□□□□ -1.85
CHD1-201ENST00000284049 TSPAN10Q9H1Z9 355 aaPredicted RBP3.49□□□□□ -1.85
CHD1-201ENST00000284049 UGGT2Q9NYU1 1516 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 ZAP70P43403 619 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 FXR2P51116 673 aaKnown RBP eCLIP3.48□□□□□ -1.852e-7■■■■■ 28.3
CHD1-201ENST00000284049 MAP3K11Q16584 847 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 PTPRNQ16849 979 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 PIP4P2Q8N4L2 257 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 BRINP2Q9C0B6 783 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 ST7Q9NRC1 585 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 CCDC194A0A1B0GVG4 234 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 USP17L7P0C7H9 530 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 RBL2Q08999 1139 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 LINC01559Q495D7 138 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 FMNL3Q8IVF7 1028 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 NUDT16Q96DE0 195 aaKnown RBP3.48□□□□□ -1.85
CHD1-201ENST00000284049 WRNQ14191 1432 aaPredicted RBP eCLIP3.48□□□□□ -1.85
CHD1-201ENST00000284049 MYCLP1P12525 358 aaPredicted RBP3.48□□□□□ -1.85
CHD1-201ENST00000284049 MZF1P28698 734 aaPredicted RBP3.48□□□□□ -1.85
CHD1-201ENST00000284049 ARSHQ5FYA8 562 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 ZNF746Q6NUN9 644 aaPredicted RBP3.48□□□□□ -1.85
CHD1-201ENST00000284049 ANKK1Q8NFD2 765 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 FEZ1Q99689 392 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 GEMIN8Q9NWZ8 242 aaKnown RBP3.48□□□□□ -1.85
CHD1-201ENST00000284049 CABP1Q9NZU7 370 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 CAND2O75155 1236 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 PHACTR2O75167 634 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 IGFBP4P22692 258 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 TNS4Q8IZW8 715 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.48□□□□□ -1.85
CHD1-201ENST00000284049 STRIP2Q9ULQ0 834 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 SNAP47Q5SQN1 464 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 TSHZ1Q6ZSZ6 1077 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 NBPF15Q8N660 670 aa3.48□□□□□ -1.85
CHD1-201ENST00000284049 MYL1P05976 194 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 TBX4P57082 545 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 DAB2P98082 770 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 ESCO1Q5FWF5 840 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 ILDR1Q86SU0 546 aaPredicted RBP3.47□□□□□ -1.85
CHD1-201ENST00000284049 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.47□□□□□ -1.85
CHD1-201ENST00000284049 PRR12Q9ULL5 1215 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 AQRO60306 1485 aaKnown RBP eCLIP3.47□□□□□ -1.853e-7■■■■■ 27.6
CHD1-201ENST00000284049 EIF1AYO14602 144 aaKnown RBP3.47□□□□□ -1.85
CHD1-201ENST00000284049 RLBP1P12271 317 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 SSRP1Q08945 709 aaKnown RBP3.47□□□□□ -1.85
CHD1-201ENST00000284049 PPP1R14AQ96A00 147 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 GPR182O15218 404 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 NFKB2Q00653 900 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 SLAIN2Q9P270 581 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 AK5Q9Y6K8 562 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 JUNDP17535 347 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 SOX5P35711 763 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 PPP4CP60510 307 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 TBCELQ5QJ74 424 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 RABGEF1Q9UJ41 708 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 FOSP01100 380 aaPredicted RBP3.47□□□□□ -1.85
CHD1-201ENST00000284049 PAX3P23760 479 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 RHBDL3P58872 404 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 HDGFL2Q7Z4V5 671 aaPredicted RBP3.47□□□□□ -1.85
CHD1-201ENST00000284049 PDILTQ8N807 584 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 TERF2IPQ9NYB0 399 aa3.47□□□□□ -1.85
CHD1-201ENST00000284049 CDV3Q9UKY7 258 aaKnown RBP3.47□□□□□ -1.85
CHD1-201ENST00000284049 EIF4G3O43432 1585 aaKnown RBP3.46□□□□□ -1.85
CHD1-201ENST00000284049 AGRPO00253 132 aa3.46□□□□□ -1.85
CHD1-201ENST00000284049 NRDCO43847 1150 aa3.46□□□□□ -1.85
CHD1-201ENST00000284049 MORN1Q5T089 497 aa3.46□□□□□ -1.85
CHD1-201ENST00000284049 TMED8Q6PL24 325 aaPredicted RBP3.46□□□□□ -1.85
CHD1-201ENST00000284049 CHAC2Q8WUX2 184 aa3.46□□□□□ -1.85
CHD1-201ENST00000284049 PRDM10Q9NQV6 1147 aa3.46□□□□□ -1.85
CHD1-201ENST00000284049 UHRF1BP1LA0JNW5 1464 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 PHF20L1A8MW92 1017 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 ALG1L2C9J202 215 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 MCCP23508 829 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 CCND1P24385 295 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 PLEKHG6Q3KR16 790 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 KSR2Q6VAB6 950 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 UBR7Q8N806 425 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 HCN4Q9Y3Q4 1203 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 ARAP3Q8WWN8 1544 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 CCDC189A1A4V9 331 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 ACTN4O43707 911 aaKnown RBP3.46□□□□□ -1.86
CHD1-201ENST00000284049 C7P10643 843 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 COL9A1P20849 921 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 HIF1AQ16665 826 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 VASH1Q7L8A9 365 aaPredicted RBP3.46□□□□□ -1.86
CHD1-201ENST00000284049 SEPT12Q8IYM1 358 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 PPM1EQ8WY54 764 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 IFT43Q96FT9 208 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 BSDC1Q9NW68 430 aaPredicted RBP3.46□□□□□ -1.86
CHD1-201ENST00000284049 POLIQ9UNA4 740 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 EID1Q9Y6B2 187 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 PBRM1Q86U86 1689 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms