RNA–Protein interactions for RNA: ENST00000261917.3

HCN4-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN4, Length 7,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4-201ENST00000261917 PI4KAP2A4QPH2 592 aa20.84■□□□□ 0.93
HCN4-201ENST00000261917 PI4KAP1Q8N8J0 262 aa20.84■□□□□ 0.93
HCN4-201ENST00000261917 TCP11L1Q9NUJ3 509 aa20.84■□□□□ 0.93
HCN4-201ENST00000261917 FGFR1OPO95684 399 aaKnown RBP20.84■□□□□ 0.93
HCN4-201ENST00000261917 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
HCN4-201ENST00000261917 FLIIQ13045 1269 aa20.83■□□□□ 0.93
HCN4-201ENST00000261917 HOMER2Q9NSB8 354 aa20.83■□□□□ 0.93
HCN4-201ENST00000261917 TFCP2L1Q9NZI6 479 aa20.83■□□□□ 0.93
HCN4-201ENST00000261917 GJA3Q9Y6H8 435 aa20.83■□□□□ 0.93
HCN4-201ENST00000261917 TROQ12816 1431 aaPredicted RBP20.83■□□□□ 0.93
HCN4-201ENST00000261917 ARL1P40616 181 aaPredicted RBP20.83■□□□□ 0.93
HCN4-201ENST00000261917 BACH2Q9BYV9 841 aa20.83■□□□□ 0.93
HCN4-201ENST00000261917 ZNF408Q9H9D4 720 aa20.83■□□□□ 0.93
HCN4-201ENST00000261917 SLC4A4Q9Y6R1 1079 aa20.82■□□□□ 0.92
HCN4-201ENST00000261917 CRNKL1Q9BZJ0 848 aaKnown RBP20.82■□□□□ 0.92
HCN4-201ENST00000261917 ADGRF5Q8IZF2 1346 aa20.82■□□□□ 0.92
HCN4-201ENST00000261917 CCDC66A2RUB6 948 aa20.82■□□□□ 0.92
HCN4-201ENST00000261917 KIF5BP33176 963 aa20.82■□□□□ 0.92
HCN4-201ENST00000261917 TTF1Q15361 905 aaPredicted RBP20.82■□□□□ 0.92
HCN4-201ENST00000261917 CRACR2AQ9BSW2 395 aa20.82■□□□□ 0.92
HCN4-201ENST00000261917 ANO10Q9NW15 660 aa20.82■□□□□ 0.92
HCN4-201ENST00000261917 PHAXQ9H814 394 aaKnown RBP20.82■□□□□ 0.92
HCN4-201ENST00000261917 CLIP2Q9UDT6 1046 aa20.82■□□□□ 0.92
HCN4-201ENST00000261917 HMGB2P26583 209 aaKnown RBP20.82■□□□□ 0.92
HCN4-201ENST00000261917 NIP7Q9Y221 180 aaKnown RBP eCLIP20.82■□□□□ 0.92
HCN4-201ENST00000261917 GJC1P36383 396 aa20.81■□□□□ 0.92
HCN4-201ENST00000261917 AFMP43652 599 aa20.81■□□□□ 0.92
HCN4-201ENST00000261917 CHPF2Q9P2E5 772 aa20.81■□□□□ 0.92
HCN4-201ENST00000261917 IFIT1BQ5T764 474 aaKnown RBP20.81■□□□□ 0.92
HCN4-201ENST00000261917 MPHOSPH6Q99547 160 aaKnown RBP20.81■□□□□ 0.92
HCN4-201ENST00000261917 HDAC9Q9UKV0 1011 aa20.81■□□□□ 0.92
HCN4-201ENST00000261917 IARSP41252 1262 aaKnown RBP20.81■□□□□ 0.92
HCN4-201ENST00000261917 OGFOD1Q8N543 542 aa20.81■□□□□ 0.92
HCN4-201ENST00000261917 SBNO2Q9Y2G9 1366 aa20.81■□□□□ 0.92
HCN4-201ENST00000261917 TMEM110-MUSTN1A8MSY1 372 aa20.81■□□□□ 0.92
HCN4-201ENST00000261917 NF2P35240 595 aa20.81■□□□□ 0.92
HCN4-201ENST00000261917 HLTFQ14527 1009 aaKnown RBP eCLIP20.8■□□□□ 0.92
HCN4-201ENST00000261917 TMCO3Q6UWJ1 677 aa20.8■□□□□ 0.92
HCN4-201ENST00000261917 HMGB1P09429 215 aaKnown RBP20.8■□□□□ 0.92
HCN4-201ENST00000261917 SFPQP23246 707 aaKnown RBP eCLIP20.8■□□□□ 0.92
HCN4-201ENST00000261917 PABPN1LA6NDY0 278 aaKnown RBP20.8■□□□□ 0.92
HCN4-201ENST00000261917 PHACTR2O75167 634 aa20.8■□□□□ 0.92
HCN4-201ENST00000261917 EVI5LQ96CN4 794 aa20.8■□□□□ 0.92
HCN4-201ENST00000261917 INCENPQ9NQS7 918 aa20.8■□□□□ 0.92
HCN4-201ENST00000261917 ADGRL1O94910 1474 aa20.8■□□□□ 0.92
HCN4-201ENST00000261917 ZCRB1Q8TBF4 217 aaKnown RBP20.8■□□□□ 0.92
HCN4-201ENST00000261917 TMC6Q7Z403 805 aa20.79■□□□□ 0.92
HCN4-201ENST00000261917 OTUD6BQ8N6M0 293 aa20.79■□□□□ 0.92
HCN4-201ENST00000261917 ACEP12821 1306 aa20.79■□□□□ 0.92
HCN4-201ENST00000261917 LDHCP07864 332 aa20.79■□□□□ 0.92
HCN4-201ENST00000261917 RARSP54136 660 aaKnown RBP20.79■□□□□ 0.92
HCN4-201ENST00000261917 UBXN4Q92575 508 aa20.79■□□□□ 0.92
HCN4-201ENST00000261917 KIF14Q15058 1648 aa20.79■□□□□ 0.92
HCN4-201ENST00000261917 CETN1Q12798 172 aa20.79■□□□□ 0.92
HCN4-201ENST00000261917 CCDC174Q6PII3 467 aa20.79■□□□□ 0.92
HCN4-201ENST00000261917 GRIPAP1Q4V328 841 aa20.78■□□□□ 0.92
HCN4-201ENST00000261917 PTPN14Q15678 1187 aa20.78■□□□□ 0.92
HCN4-201ENST00000261917 SSFA2P28290 1259 aa20.78■□□□□ 0.92
HCN4-201ENST00000261917 SMC1AQ14683 1233 aaKnown RBP20.78■□□□□ 0.92
HCN4-201ENST00000261917 CCDC12Q8WUD4 166 aaPredicted RBP20.78■□□□□ 0.92
HCN4-201ENST00000261917 GSTO1P78417 241 aa20.78■□□□□ 0.92
HCN4-201ENST00000261917 CCDC183Q5T5S1 534 aa20.78■□□□□ 0.92
HCN4-201ENST00000261917 STAMBPO95630 424 aa20.77■□□□□ 0.92
HCN4-201ENST00000261917 NECAB1Q8N987 351 aa20.77■□□□□ 0.92
HCN4-201ENST00000261917 TBCAO75347 108 aaKnown RBP20.77■□□□□ 0.92
HCN4-201ENST00000261917 MSH6P52701 1360 aa20.77■□□□□ 0.92
HCN4-201ENST00000261917 IDI1Q13907 227 aa20.77■□□□□ 0.92
HCN4-201ENST00000261917 EXOC1Q9NV70 894 aa20.77■□□□□ 0.92
HCN4-201ENST00000261917 MCM4P33991 863 aa20.77■□□□□ 0.92
HCN4-201ENST00000261917 UBA7P41226 1012 aa20.77■□□□□ 0.92
HCN4-201ENST00000261917 AMPD3Q01432 767 aa20.77■□□□□ 0.92
HCN4-201ENST00000261917 PARP3Q9Y6F1 533 aa20.77■□□□□ 0.92
HCN4-201ENST00000261917 SNRPA1P09661 255 aaKnown RBP20.77■□□□□ 0.92
HCN4-201ENST00000261917 HELBQ8NG08 1087 aaPredicted RBP20.77■□□□□ 0.91
HCN4-201ENST00000261917 PKD2L1Q9P0L9 805 aa20.77■□□□□ 0.91
HCN4-201ENST00000261917 USO1O60763 962 aaKnown RBP20.76■□□□□ 0.91
HCN4-201ENST00000261917 YEATS4O95619 227 aa20.76■□□□□ 0.91
HCN4-201ENST00000261917 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
HCN4-201ENST00000261917 ORC3Q9UBD5 711 aaPredicted RBP20.76■□□□□ 0.91
HCN4-201ENST00000261917 ATP2B3Q16720 1220 aa20.76■□□□□ 0.91
HCN4-201ENST00000261917 CHST3Q7LGC8 479 aa20.76■□□□□ 0.91
HCN4-201ENST00000261917 POLR3GO15318 223 aaPredicted RBP20.76■□□□□ 0.91
HCN4-201ENST00000261917 WTAPQ15007 396 aa20.76■□□□□ 0.91
HCN4-201ENST00000261917 NCOA7Q8NI08 942 aa20.76■□□□□ 0.91
HCN4-201ENST00000261917 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
HCN4-201ENST00000261917 ANKRD13DQ6ZTN6 518 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 RBM27Q9P2N5 1060 aaKnown RBP20.75■□□□□ 0.91
HCN4-201ENST00000261917 MRVI1Q9Y6F6 885 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 LRRC59Q96AG4 307 aaKnown RBP20.75■□□□□ 0.91
HCN4-201ENST00000261917 TCEANC2Q96MN5 208 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 CEP63Q96MT8 703 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 MIGA1Q8NAN2 632 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 XAGE3Q8WTP9 111 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 SIRT1Q96EB6 747 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 SPECC1Q5M775 1068 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 NEK1Q96PY6 1258 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 LIMCH1Q9UPQ0 1083 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 ZSWIM4Q9H7M6 989 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 MBIPQ9NS73 344 aa20.75■□□□□ 0.91
HCN4-201ENST00000261917 RNF187Q5TA31 235 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms