RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 HOXA10P31260 410 aaPredicted RBP25.92■■□□□ 1.74
SYNGR1-201ENST00000216155 GIGYF2Q6Y7W6 1299 aaKnown RBP25.92■■□□□ 1.74
SYNGR1-201ENST00000216155 RPGRQ92834 1020 aaKnown RBP25.92■■□□□ 1.74
SYNGR1-201ENST00000216155 RNF123Q5XPI4 1314 aa25.91■■□□□ 1.74
SYNGR1-201ENST00000216155 RIPK4P57078 832 aa25.91■■□□□ 1.74
SYNGR1-201ENST00000216155 SLC51AQ86UW1 340 aa25.91■■□□□ 1.74
SYNGR1-201ENST00000216155 MKRN1Q9UHC7 482 aaKnown RBP25.91■■□□□ 1.74
SYNGR1-201ENST00000216155 HACL1Q9UJ83 578 aa25.91■■□□□ 1.74
SYNGR1-201ENST00000216155 PDIA6Q15084 440 aa25.9■■□□□ 1.74
SYNGR1-201ENST00000216155 EAPPQ56P03 285 aaPredicted RBP25.9■■□□□ 1.74
SYNGR1-201ENST00000216155 CC2D2BQ6DHV5 1058 aa25.9■■□□□ 1.74
SYNGR1-201ENST00000216155 C3orf67Q6ZVT6 689 aa25.9■■□□□ 1.74
SYNGR1-201ENST00000216155 EPHX2P34913 555 aa25.89■■□□□ 1.74
SYNGR1-201ENST00000216155 RALBP1Q15311 655 aa25.89■■□□□ 1.74
SYNGR1-201ENST00000216155 PROSER3Q2NL68 480 aa25.89■■□□□ 1.74
SYNGR1-201ENST00000216155 ANKRD36CQ5JPF3 1778 aa25.89■■□□□ 1.73
SYNGR1-201ENST00000216155 CNTNAP1P78357 1384 aa25.88■■□□□ 1.73
SYNGR1-201ENST00000216155 EIF2S2P20042 333 aaKnown RBP25.88■■□□□ 1.73
SYNGR1-201ENST00000216155 GPC2Q8N158 579 aa25.88■■□□□ 1.73
SYNGR1-201ENST00000216155 ANXA1P04083 346 aa25.87■■□□□ 1.73
SYNGR1-201ENST00000216155 TMPOP42166 694 aaKnown RBP25.87■■□□□ 1.73
SYNGR1-201ENST00000216155 PARP10Q53GL7 1025 aa25.87■■□□□ 1.73
SYNGR1-201ENST00000216155 PPP1R42Q7Z4L9 355 aa25.87■■□□□ 1.73
SYNGR1-201ENST00000216155 JDP2Q8WYK2 163 aa25.87■■□□□ 1.73
SYNGR1-201ENST00000216155 RBM17Q96I25 401 aaKnown RBP25.87■■□□□ 1.73
SYNGR1-201ENST00000216155 CRAMP1Q96RY5 1269 aa25.87■■□□□ 1.73
SYNGR1-201ENST00000216155 BABAM1Q9NWV8 329 aa25.87■■□□□ 1.73
SYNGR1-201ENST00000216155 LTBP1Q14766 1721 aa25.87■■□□□ 1.73
SYNGR1-201ENST00000216155 PPEF1O14829 653 aaPredicted RBP25.86■■□□□ 1.73
SYNGR1-201ENST00000216155 ITGBL1O95965 494 aaPredicted RBP25.86■■□□□ 1.73
SYNGR1-201ENST00000216155 LMOD3Q0VAK6 560 aa25.85■■□□□ 1.73
SYNGR1-201ENST00000216155 TNS4Q8IZW8 715 aa25.85■■□□□ 1.73
SYNGR1-201ENST00000216155 GRIPAP1Q4V328 841 aa25.84■■□□□ 1.73
SYNGR1-201ENST00000216155 LAMB2P55268 1798 aa25.84■■□□□ 1.73
SYNGR1-201ENST00000216155 PNMA8AQ86V59 439 aaPredicted RBP25.83■■□□□ 1.73
SYNGR1-201ENST00000216155 UTP14AQ9BVJ6 771 aaKnown RBP25.83■■□□□ 1.73
SYNGR1-201ENST00000216155 CLEC11AQ9Y240 323 aa25.83■■□□□ 1.73
SYNGR1-201ENST00000216155 TMEM88BA6NKF7 163 aa25.82■■□□□ 1.72
SYNGR1-201ENST00000216155 TCERG1O14776 1098 aaKnown RBP25.82■■□□□ 1.72
SYNGR1-201ENST00000216155 EIF6P56537 245 aaKnown RBP25.82■■□□□ 1.72
SYNGR1-201ENST00000216155 LARGE2Q8N3Y3 721 aa25.82■■□□□ 1.72
SYNGR1-201ENST00000216155 NLRP3Q96P20 1036 aa25.82■■□□□ 1.72
SYNGR1-201ENST00000216155 GJA3Q9Y6H8 435 aa25.82■■□□□ 1.72
SYNGR1-201ENST00000216155 MAP1SQ66K74 1059 aaPredicted RBP25.81■■□□□ 1.72
SYNGR1-201ENST00000216155 CCDC146Q8IYE0 955 aa25.81■■□□□ 1.72
SYNGR1-201ENST00000216155 NECTIN2Q92692 538 aa25.81■■□□□ 1.72
SYNGR1-201ENST00000216155 ABCC4O15439 1325 aa25.81■■□□□ 1.72
SYNGR1-201ENST00000216155 MYBBP1AQ9BQG0 1328 aaKnown RBP25.81■■□□□ 1.72
SYNGR1-201ENST00000216155 SLC10A5Q5PT55 438 aa25.8■■□□□ 1.72
SYNGR1-201ENST00000216155 SCNN1DP51172 638 aa25.79■■□□□ 1.72
SYNGR1-201ENST00000216155 KRT24Q2M2I5 525 aa25.79■■□□□ 1.72
SYNGR1-201ENST00000216155 COPS6Q7L5N1 327 aa25.79■■□□□ 1.72
SYNGR1-201ENST00000216155 CNTROBQ8N137 903 aa25.79■■□□□ 1.72
SYNGR1-201ENST00000216155 XAGE3Q8WTP9 111 aa25.79■■□□□ 1.72
SYNGR1-201ENST00000216155 HSP90AB3PQ58FF7 597 aa25.78■■□□□ 1.72
SYNGR1-201ENST00000216155 NLRP10Q86W26 655 aa25.78■■□□□ 1.72
SYNGR1-201ENST00000216155 ATP6V0A2Q9Y487 856 aa25.78■■□□□ 1.72
SYNGR1-201ENST00000216155 PPIP5K2O43314 1243 aa25.77■■□□□ 1.72
SYNGR1-201ENST00000216155 CAPN15O75808 1086 aa25.77■■□□□ 1.72
SYNGR1-201ENST00000216155 AIMP1Q12904 312 aaKnown RBP25.77■■□□□ 1.72
SYNGR1-201ENST00000216155 NEUROD2Q15784 382 aa25.77■■□□□ 1.72
SYNGR1-201ENST00000216155 NIM1KQ8IY84 436 aa25.77■■□□□ 1.72
SYNGR1-201ENST00000216155 CHL1O00533 1208 aa25.76■■□□□ 1.71
SYNGR1-201ENST00000216155 LMOD1P29536 600 aaPredicted RBP25.76■■□□□ 1.71
SYNGR1-201ENST00000216155 VEGFBP49765 207 aa25.76■■□□□ 1.71
SYNGR1-201ENST00000216155 AOC3Q16853 763 aa25.76■■□□□ 1.71
SYNGR1-201ENST00000216155 DDX21Q9NR30 783 aaKnown RBP eCLIP25.76■■□□□ 1.71
SYNGR1-201ENST00000216155 TRIM35Q9UPQ4 493 aa25.76■■□□□ 1.71
SYNGR1-201ENST00000216155 DDX10Q13206 875 aaKnown RBP25.75■■□□□ 1.71
SYNGR1-201ENST00000216155 FOXN1O15353 648 aa25.74■■□□□ 1.71
SYNGR1-201ENST00000216155 HCLS1P14317 486 aaPredicted RBP25.74■■□□□ 1.71
SYNGR1-201ENST00000216155 EPS15P42566 896 aa25.74■■□□□ 1.71
SYNGR1-201ENST00000216155 TCIRG1Q13488 830 aa25.74■■□□□ 1.71
SYNGR1-201ENST00000216155 TMX4Q9H1E5 349 aaPredicted RBP25.74■■□□□ 1.71
SYNGR1-201ENST00000216155 CHPF2Q9P2E5 772 aa25.74■■□□□ 1.71
SYNGR1-201ENST00000216155 RUNDC1Q96C34 613 aa25.73■■□□□ 1.71
SYNGR1-201ENST00000216155 RTFDC1Q9BY42 306 aaPredicted RBP25.73■■□□□ 1.71
SYNGR1-201ENST00000216155 DDX60Q8IY21 1712 aaKnown RBP25.73■■□□□ 1.71
SYNGR1-201ENST00000216155 SH3TC1Q8TE82 1336 aa25.72■■□□□ 1.71
SYNGR1-201ENST00000216155 RASSF10A6NK89 507 aa25.72■■□□□ 1.71
SYNGR1-201ENST00000216155 VPS33BQ9H267 617 aa25.72■■□□□ 1.71
SYNGR1-201ENST00000216155 TRMT112Q9UI30 125 aaKnown RBP25.72■■□□□ 1.71
SYNGR1-201ENST00000216155 LAS1LQ9Y4W2 734 aaKnown RBP25.72■■□□□ 1.71
SYNGR1-201ENST00000216155 LRRC37AA6NMS7 1700 aa25.71■■□□□ 1.71
SYNGR1-201ENST00000216155 TAF1P21675 1872 aa25.71■■□□□ 1.71
SYNGR1-201ENST00000216155 DUOX1Q9NRD9 1551 aa25.71■■□□□ 1.71
SYNGR1-201ENST00000216155 WDR43Q15061 677 aaKnown RBP eCLIP25.71■■□□□ 1.71
SYNGR1-201ENST00000216155 BBOX1O75936 387 aa25.7■■□□□ 1.7
SYNGR1-201ENST00000216155 SUPT20HQ8NEM7 779 aa25.7■■□□□ 1.7
SYNGR1-201ENST00000216155 GRAPQ13588 217 aa25.69■■□□□ 1.7
SYNGR1-201ENST00000216155 HDGFL1Q5TGJ6 251 aa25.69■■□□□ 1.7
SYNGR1-201ENST00000216155 DPP8Q6V1X1 898 aaPredicted RBP25.69■■□□□ 1.7
SYNGR1-201ENST00000216155 USP50Q70EL3 339 aaPredicted RBP25.69■■□□□ 1.7
SYNGR1-201ENST00000216155 SP8Q8IXZ3 490 aa25.69■■□□□ 1.7
SYNGR1-201ENST00000216155 GRAPLQ8TC17 118 aaPredicted RBP25.69■■□□□ 1.7
SYNGR1-201ENST00000216155 THSD7BQ9C0I4 1608 aa25.68■■□□□ 1.7
SYNGR1-201ENST00000216155 HOXB7P09629 217 aa25.68■■□□□ 1.7
SYNGR1-201ENST00000216155 FMR1Q06787 632 aaKnown RBP eCLIP25.68■■□□□ 1.7
SYNGR1-201ENST00000216155 CXCL9Q07325 125 aa25.68■■□□□ 1.7
SYNGR1-201ENST00000216155 DEFB115Q30KQ5 88 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms