RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Atp6v1aP50516 617 aaKnown RBP18.26■□□□□ 0.51
Upf1-202ENSMUST00000215817 Zkscan8Q8BSL0 588 aa18.26■□□□□ 0.51
Upf1-202ENSMUST00000215817 Col15a1O35206 1367 aa18.26■□□□□ 0.51
Upf1-202ENSMUST00000215817 MeiocA2AG06 965 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Znf692Q3U381 531 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Tnpo1Q8BFY9 898 aaKnown RBP18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Srp68Q8BMA6 625 aaKnown RBP18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Irgm2A0A140LIF8 407 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Rbbp8nlA2ABX0 614 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Ppip5k2Q6ZQB6 1129 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Ufl1Q8CCJ3 793 aaKnown RBP18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Gigyf1Q99MR1 1044 aaKnown RBP18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Nwd1A6H603 1563 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Prl3d3A0A0M6L0J6 224 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Lmod1Q8BVA4 595 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Nup133Q8R0G9 1155 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Kif2cQ922S8 721 aa18.25■□□□□ 0.51
Upf1-202ENSMUST00000215817 Tmem67Q8BR76 992 aa18.24■□□□□ 0.51
Upf1-202ENSMUST00000215817 NapbP28663 298 aa18.24■□□□□ 0.51
Upf1-202ENSMUST00000215817 Fchsd1Q6PFY1 688 aa18.24■□□□□ 0.51
Upf1-202ENSMUST00000215817 Slx1bQ8BX32 270 aa18.24■□□□□ 0.51
Upf1-202ENSMUST00000215817 Ssfa2Q922B9 1252 aa18.24■□□□□ 0.51
Upf1-202ENSMUST00000215817 Slit3Q9WVB4 1523 aa18.23■□□□□ 0.51
Upf1-202ENSMUST00000215817 Ints3Q7TPD0 1041 aaKnown RBP18.23■□□□□ 0.51
Upf1-202ENSMUST00000215817 Ttc14Q9CSP9 761 aa18.23■□□□□ 0.51
Upf1-202ENSMUST00000215817 Kcnh4A2A5F7 1018 aa18.23■□□□□ 0.51
Upf1-202ENSMUST00000215817 Ets1P27577 440 aa18.23■□□□□ 0.51
Upf1-202ENSMUST00000215817 Hand2Q61039 217 aa18.23■□□□□ 0.51
Upf1-202ENSMUST00000215817 Cyp2d12Q8BVD2 504 aa18.23■□□□□ 0.51
Upf1-202ENSMUST00000215817 Nrxn3Q6P9K9 1571 aa18.23■□□□□ 0.51
Upf1-202ENSMUST00000215817 MaddQ80U28 1577 aa18.23■□□□□ 0.51
Upf1-202ENSMUST00000215817 Tmem119Q8R138 280 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Mical1Q8VDP3 1048 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Krt82Q99M74 516 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Irs4Q9Z0Y7 1216 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Atp7bQ64446 1462 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Aldh1l2Q8K009 923 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Cchcr1Q8K2I2 770 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Wdr63B2RY71 923 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Tshz3Q8CGV9 1081 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Gm21969J3QJZ1 289 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Tlr7P58681 1050 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Rsph3aQ3UFY4 516 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Tmem266Q8BZB3 538 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 IkQ9Z1M8 557 aaKnown RBP18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Rps6ka4Q9Z2B9 773 aa18.22■□□□□ 0.51
Upf1-202ENSMUST00000215817 Eya2O08575 532 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Hs1bp3Q3TC93 395 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Kdm3aQ6PCM1 1323 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Abcc12Q80WJ6 1366 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Vps33bP59016 617 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Polr3dQ91WD1 398 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Med1Q925J9 1575 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Ppp4r3aQ6P2K6 820 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Ccdc39Q9D5Y1 937 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Pik3c2bE9QAN8 1632 aa18.21■□□□□ 0.51
Upf1-202ENSMUST00000215817 Sult6b1P0CC03 303 aa18.21■□□□□ 0.5
Upf1-202ENSMUST00000215817 Zbtb38Q3LR78 1197 aa18.21■□□□□ 0.5
Upf1-202ENSMUST00000215817 Ncbp1Q3UYV9 790 aaKnown RBP18.21■□□□□ 0.5
Upf1-202ENSMUST00000215817 Bend3Q6PAL0 825 aa18.21■□□□□ 0.5
Upf1-202ENSMUST00000215817 Fsd2Q8BZ52 692 aa18.21■□□□□ 0.5
Upf1-202ENSMUST00000215817 Fam170aQ66LM6 333 aa18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Morc2aQ69ZX6 1030 aa18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Tmc1Q8R4P5 757 aa18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Krt84Q99M73 603 aa18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Babam1Q3UI43 333 aa18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Vps54Q5SPW0 977 aa18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 PogkQ80TC5 607 aa18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Mad1l1Q9WTX8 717 aaKnown RBP18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Arid3aQ62431 601 aa18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Adam1bQ8R534 806 aa18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Mrpl12Q9DB15 201 aaKnown RBP18.2■□□□□ 0.5
Upf1-202ENSMUST00000215817 Tpd52l1O54818 204 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Tbc1d9Q3UYK3 1264 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Fam160b2Q80YR2 744 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 BccipQ9CWI3 316 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Cyp2c23E9Q5K4 494 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Rbm17Q8JZX4 405 aaKnown RBP18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Tut1Q8R3F9 869 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Mctp2Q5RJH2 878 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Kif13aQ9EQW7 1749 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Prdm11A2AGX3 565 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Mmp8O70138 465 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Ercc3P49135 783 aa18.19■□□□□ 0.5
Upf1-202ENSMUST00000215817 Pla2g4fQ50L41 855 aa18.18■□□□□ 0.5
Upf1-202ENSMUST00000215817 Arhgap33Q80YF9 1305 aa18.18■□□□□ 0.5
Upf1-202ENSMUST00000215817 Pde3aQ9Z0X4 1141 aa18.18■□□□□ 0.5
Upf1-202ENSMUST00000215817 Prl3d2F6R3P9 224 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Q8C6G1 249 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Evc2Q8K1G2 1220 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Nap1l3Q794H2 544 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Fsd1Q7TPM6 496 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Rlbp1Q9Z275 317 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Aox2Q5SGK3 1345 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Large2Q5XPT3 690 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 HellsQ60848 821 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Znf526Q8BI66 675 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Pms1Q8K119 917 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Amhr2Q8K592 568 aa18.17■□□□□ 0.5
Upf1-202ENSMUST00000215817 Mylk2Q8VCR8 613 aa18.17■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 150.9 ms