RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Ythdc2B2RR83 1445 aaKnown RBP10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Trim34bJ3QNR8 485 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Sept6Q9R1T4 434 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 4930572O03RikQ8C5Y0 211 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Rrbp1Q99PL5 1605 aaKnown RBP10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Spata24Q6P926 205 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Mrpl44Q9CY73 333 aaKnown RBP10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Syt10Q9R0N4 523 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Pank2Q3U4S0 443 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Dydc1Q9D9T0 175 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Nucb2P81117 420 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ncbp1Q3UYV9 790 aaKnown RBP10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Prune1Q8BIW1 454 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Amotl2Q8K371 772 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ppp6r3Q922D4 844 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Q9D5Q8 446 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Mlh1Q9JK91 760 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Cfap74Q3UY96 1578 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ctnnbl1Q9CWL8 563 aaKnown RBP10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Snw1Q9CSN1 536 aaKnown RBP10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ttc21aQ8C0S4 1314 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 LyarQ08288 388 aaKnown RBP10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Kiaa0753Q6A000 959 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Elp1Q7TT37 1333 aaKnown RBP10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Armc3A2AU72 881 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Phldb2Q8K1N2 1249 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Abca16E9PWJ7 1678 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Naip7Q9JIB3 1402 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Maats1Q8BRC6 783 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Sept11Q8C1B7 431 aaKnown RBP10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Mipol1Q9D9F8 279 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ripk4Q9ERK0 786 aa10.63□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ercc3P49135 783 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Zcwpw1Q6IR42 630 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Nol11Q8BJW5 723 aaKnown RBP10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Suds3Q8BR65 328 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Frmpd2A0A140LI67 1392 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Tyro3P55144 880 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Fam170aQ66LM6 333 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Echdc1Q9D9V3 322 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Cyp27a1Q9DBG1 533 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Usp19Q3UJD6 1360 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Srgap1Q91Z69 1062 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Kcnh5Q920E3 988 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Lmbr1lQ9D1E5 489 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Map3k4O08648 1597 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Dph6Q9CQ28 267 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Prl7d1P04769 244 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Paxbp1P58501 919 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 GnpatP98192 678 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Syt1P46096 421 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Igf2bp2Q5SF07 592 aaKnown RBP10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Tsr2Q8C8T8 191 aa10.62□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Kdm4cQ8VCD7 1054 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Cyp26c1B2RXA7 518 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Stim1P70302 685 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Dact3Q0PHV7 610 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Vps18Q8R307 973 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 ApobrQ8VBT6 942 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Cfap45Q9D9U9 551 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Rbbp8nlA2ABX0 614 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Plekhd1B2RPU2 505 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Znf131Q8K3J5 619 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Lman1Q9D0F3 517 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Tbc1d8Q9Z1A9 1134 aa10.61□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ifit2Q64112 472 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Tti2Q8BGV4 512 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Slc5a1Q8C3K6 665 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Mtmr3Q8K296 1196 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ier5O89113 308 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Arl1P61211 181 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Adamts12Q811B3 1600 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Fhod3Q76LL6 1578 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Nphp4P59240 1425 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Cavin2Q63918 418 aaKnown RBP10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Aldh1l2Q8K009 923 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 NapbP28663 298 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ndufa8Q9DCJ5 172 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Skint5A7XUY5 1461 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ano10Q8BH79 659 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Atg4a-psA0A0G2JFS9 396 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Esyt1Q3U7R1 1092 aaKnown RBP10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 U2af1l4Q8BGJ9 220 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Atg4aQ8C9S8 396 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Lmbr1Q9JIT0 490 aa10.6□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Kif3cO35066 796 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Igflr1Q3U4N7 345 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Eif3bQ8JZQ9 803 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 GptQ8QZR5 496 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 TxlnbQ8VBT1 685 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ak2Q9WTP6 239 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Eif4g3Q80XI3 1579 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Snap23O09044 210 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Trim11Q99PQ2 467 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Mrps25Q9D125 171 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Mybbp1aQ7TPV4 1344 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Sept7O55131 436 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Mdm2P23804 489 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Gnl1P36916 607 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Cfap69Q8BH53 942 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms