RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Stx8O88983 236 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Rad17Q6NXW6 688 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Ufl1Q8CCJ3 793 aaKnown RBP12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Plagl1Q9JLQ4 704 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Dhx8A2A4P0 1244 aaKnown RBP12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Ccdc66Q6NS45 935 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Slfnl1Q8BHW9 410 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Tsr2Q8C8T8 191 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Plxnc1Q9QZC2 1574 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Pard3Q99NH2 1333 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Terf2O35144 541 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Mcm3P25206 812 aaKnown RBP12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Tbc1d32Q3URV1 1296 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Bend3Q6PAL0 825 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Lrrc59Q922Q8 307 aaKnown RBP12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 CoilQ5SU73 570 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Itga6Q61739 1091 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Myl10Q62082 202 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Fchsd1Q6PFY1 688 aa12.73□□□□□ -0.37
Msh3-202ENSMUST00000185852 Atf5O70191 283 aa12.72□□□□□ -0.37
Msh3-202ENSMUST00000185852 Kif4P33174 1231 aa12.72□□□□□ -0.37
Msh3-202ENSMUST00000185852 Wdhd1P59328 1117 aa12.72□□□□□ -0.37
Msh3-202ENSMUST00000185852 Fam135bQ9DAI6 1403 aa12.72□□□□□ -0.37
Msh3-202ENSMUST00000185852 Hecw1Q8K4P8 1604 aa12.72□□□□□ -0.37
Msh3-202ENSMUST00000185852 Dok7Q18PE0 504 aa12.72□□□□□ -0.37
Msh3-202ENSMUST00000185852 Stk38Q91VJ4 465 aa12.72□□□□□ -0.37
Msh3-202ENSMUST00000185852 Iqgap3F8VQ29 1632 aa12.72□□□□□ -0.37
Msh3-202ENSMUST00000185852 Speer4dL7N216 212 aa12.72□□□□□ -0.37
Msh3-202ENSMUST00000185852 Mapkapk5O54992 473 aa12.71□□□□□ -0.37
Msh3-202ENSMUST00000185852 Hs1bp3Q3TC93 395 aa12.71□□□□□ -0.37
Msh3-202ENSMUST00000185852 Ccdc158Q8CDI6 1109 aa12.71□□□□□ -0.37
Msh3-202ENSMUST00000185852 Ginm1Q91WR6 327 aa12.71□□□□□ -0.37
Msh3-202ENSMUST00000185852 Syce3B5KM66 88 aa12.71□□□□□ -0.37
Msh3-202ENSMUST00000185852 Sult6b1P0CC03 303 aa12.71□□□□□ -0.37
Msh3-202ENSMUST00000185852 Znf18Q810A1 556 aa12.71□□□□□ -0.37
Msh3-202ENSMUST00000185852 Ankrd23Q812A3 306 aa12.71□□□□□ -0.37
Msh3-202ENSMUST00000185852 Kiaa0556Q8C753 1610 aa12.71□□□□□ -0.37
Msh3-202ENSMUST00000185852 Xrn1P97789 1719 aaKnown RBP12.71□□□□□ -0.38
Msh3-202ENSMUST00000185852 TnrQ8BYI9 1358 aa12.71□□□□□ -0.38
Msh3-202ENSMUST00000185852 Prl3d3A0A0M6L0J6 224 aa12.71□□□□□ -0.38
Msh3-202ENSMUST00000185852 Rasa1E9PYG6 1038 aa12.71□□□□□ -0.38
Msh3-202ENSMUST00000185852 Cdcp1Q5U462 833 aa12.71□□□□□ -0.38
Msh3-202ENSMUST00000185852 Hook1Q8BIL5 728 aa12.71□□□□□ -0.38
Msh3-202ENSMUST00000185852 Cep55Q8BT07 462 aa12.71□□□□□ -0.38
Msh3-202ENSMUST00000185852 Dis3l2Q8CI75 870 aaKnown RBP12.71□□□□□ -0.38
Msh3-202ENSMUST00000185852 DymQ8CHY3 669 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ppfibp2O35711 882 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ccdc129Q14B48 1034 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Eme2Q56A04 373 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Gas2l3Q3UWW6 683 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Prdm1Q60636 856 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Aldh8a1Q8BH00 487 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Taok3Q8BYC6 898 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Sde2Q8K1J5 448 aaKnown RBP12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Lrrfip2Q91WK0 415 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Kif2cQ922S8 721 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Krt84Q99M73 603 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 CenppQ9CZ92 286 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Pus3Q9JI38 481 aa12.7□□□□□ -0.38
Msh3-202ENSMUST00000185852 Slc4a8Q8JZR6 1089 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 4930407I10RikD3Z5T8 1512 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 AceP09470 1312 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 TnksQ6PFX9 1320 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Eya2O08575 532 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Aldh1l2Q8K009 923 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Glg1Q61543 1175 aaKnown RBP12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Isy1Q69ZQ2 285 aaKnown RBP12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ncbp3Q8BZR9 615 aaKnown RBP12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Myl6bQ8CI43 207 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Kri1Q8VDQ9 704 aaKnown RBP12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Irs4Q9Z0Y7 1216 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Akap12Q9WTQ5 1684 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 PtpruB1AUH1 1446 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 AglF8VPN4 1532 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ppp6r3Q922D4 844 aa12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 NaspQ99MD9 773 aaKnown RBP12.69□□□□□ -0.38
Msh3-202ENSMUST00000185852 Kdm6aO70546 1401 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Anapc15-psA0A140T8L6 141 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Cyp2c23E9Q5K4 494 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Tm6sf1P58749 370 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Slc7a3P70423 618 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Gpatch3Q8BIY1 525 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Srp68Q8BMA6 625 aaKnown RBP12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 PtprmP28828 1452 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ano8Q6PB70 1060 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Foxo3Q9WVH4 672 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Cdc42bpgQ80UW5 1551 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 AU015836B2RUM3 263 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 Pik3ap1Q9EQ32 811 aa12.68□□□□□ -0.38
Msh3-202ENSMUST00000185852 A0A0U1RNP2 1173 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Zkscan16A2ALW2 728 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Atp1b3P97370 278 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Large2Q5XPT3 690 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Prpf4bQ61136 1007 aaKnown RBP12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ccdc178Q8CDV0 866 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Cnot6lQ8VEG6 555 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ccdc96Q9CR92 584 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Tktl2Q9D4D4 627 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Galntl5Q9D4M9 431 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Naa16Q9DBB4 864 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms