RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 CoblQ5NBX1 1337 aaKnown RBP20.5■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Ssc5dQ8BV57 1371 aa20.5■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Atg4a-psA0A0G2JFS9 396 aa20.5■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Adam1aQ60813 791 aa20.5■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Slfnl1Q8BHW9 410 aa20.5■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Atg4aQ8C9S8 396 aa20.5■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 GpkowQ56A08 488 aa20.49■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Pnmal2G3X9N3 661 aa20.48■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Strn4P58404 760 aa20.48■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Slf2Q6P9P0 1278 aa20.48■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 KnstrnQ9D9Z1 312 aaKnown RBP20.48■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 InsrrQ9WTL4 1300 aa20.48■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Smc4Q8CG47 1286 aa20.48■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Mrc1Q61830 1456 aa20.48■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Ccdc146E9Q9F7 977 aa20.47■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Hmgb2P30681 210 aaKnown RBP20.47■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Ankrd13dQ6PD24 605 aa20.47■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Nsfl1cQ9CZ44 370 aaKnown RBP20.46■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Ripk4Q9ERK0 786 aa20.46■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Vars2Q3U2A8 1060 aa20.45■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 NexnQ7TPW1 607 aa20.45■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Wdr63B2RY71 923 aa20.45■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Hoxa7P02830 229 aa20.45■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Ush1cQ9ES64 910 aa20.45■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Cyp46a1Q9WVK8 500 aa20.45■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Trip6Q9Z1Y4 480 aa20.45■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Pa2g4P50580 394 aaKnown RBP20.44■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Ttc19Q8CC21 365 aa20.44■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Dpf1Q9QX66 387 aa20.44■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Kiaa0232Q80U59 1396 aaKnown RBP20.44■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Adora1Q60612 326 aa20.44■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Clca2Q8BG22 942 aa20.44■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Fez1Q8K0X8 392 aa20.44■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Trim34aQ99PP6 485 aa20.44■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Pdia4P08003 638 aaKnown RBP20.43■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Cyp19a1P28649 503 aa20.43■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Tmem87bQ8BKU8 555 aa20.43■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 SowahdQ8BY98 327 aa20.43■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Lekr1B2RVN1 116 aa20.42■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Ifit1bl2Q3U687 466 aa20.42■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Cog6Q8R3I3 657 aa20.42■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Kdm4cQ8VCD7 1054 aa20.42■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Cct4P80315 539 aaKnown RBP20.42■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 GptQ8QZR5 496 aa20.42■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Snai1Q02085 264 aa20.41■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Zbtb3Q91X45 518 aa20.41■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 NgdnQ9DB96 315 aaKnown RBP20.41■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Abcc4E9Q236 1325 aa20.41■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Pim2Q62070 370 aa20.41■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Arap2Q8BZ05 1703 aa20.4■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Prl3d2F6R3P9 224 aa20.4■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Cops6O88545 324 aa20.4■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Plcb3P51432 1234 aaKnown RBP20.4■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Irf5P56477 497 aa20.4■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Atp1b3P97370 278 aa20.4■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Igflr1Q3U4N7 345 aa20.4■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 HmcesQ8R1M0 353 aaKnown RBP20.4■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 RtcbQ99LF4 505 aaKnown RBP20.4■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Tmx3Q8BXZ1 456 aa20.39■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Rbm10Q99KG3 930 aaKnown RBP20.39■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 Snapc4Q8BP86 1333 aa20.39■□□□□ 0.86
Hoxc4-202ENSMUST00000165375 C4bP01029 1738 aa20.39■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 DekQ7TNV0 380 aaKnown RBP20.39■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Q8C5K5 320 aa20.39■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Becn1O88597 448 aa20.38■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Nol10Q5RJG1 687 aaKnown RBP20.38■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Foxo4Q9WVH3 505 aa20.38■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Jarid2Q62315 1234 aa20.38■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Susd4Q8BH32 490 aa20.38■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Mapk8ip1Q9WVI9 707 aa20.38■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Prl3d3A0A0M6L0J6 224 aa20.37■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Bcar3Q9QZK2 820 aa20.37■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Lama4P97927 1816 aa20.37■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Dctn1O08788 1281 aa20.36■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Rfx1P48377 963 aa20.36■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Zc3h12cQ5DTV4 884 aa20.36■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 AppP12023 770 aa20.36■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 BcanQ61361 883 aa20.36■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Rtkn2Q14B46 604 aa20.35■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Zbtb38Q3LR78 1197 aa20.35■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 MpndQ3TV65 487 aa20.35■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Rbm27Q5SFM8 1060 aaKnown RBP20.35■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Cyp7a1Q64505 503 aa20.35■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Cyp2c23E9Q5K4 494 aa20.34■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Ptpdc1Q6NZK8 747 aa20.34■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Gimap8Q75N62 688 aa20.34■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 BccipQ9CWI3 316 aa20.34■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Zkscan2G3X952 960 aa20.33■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Npy5rO70342 466 aa20.33■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Mknk2Q8CDB0 459 aa20.33■□□□□ 0.85
Hoxc4-202ENSMUST00000165375 Trim34bJ3QNR8 485 aa20.33■□□□□ 0.84
Hoxc4-202ENSMUST00000165375 Sult6b1P0CC03 303 aa20.33■□□□□ 0.84
Hoxc4-202ENSMUST00000165375 Ets1P27577 440 aa20.33■□□□□ 0.84
Hoxc4-202ENSMUST00000165375 ImpactO55091 318 aa20.32■□□□□ 0.84
Hoxc4-202ENSMUST00000165375 Ppp4r3aQ6P2K6 820 aa20.32■□□□□ 0.84
Hoxc4-202ENSMUST00000165375 Srp68Q8BMA6 625 aaKnown RBP20.32■□□□□ 0.84
Hoxc4-202ENSMUST00000165375 Amhr2Q8K592 568 aa20.32■□□□□ 0.84
Hoxc4-202ENSMUST00000165375 Ttc14Q9CSP9 761 aa20.32■□□□□ 0.84
Hoxc4-202ENSMUST00000165375 Erich6bQ9D4S6 220 aa20.32■□□□□ 0.84
Hoxc4-202ENSMUST00000165375 Zfp91Q62511 572 aa20.32■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms