RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Rbm17Q8JZX4 405 aaKnown RBP17.38■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Chmp4bQ9D8B3 224 aaKnown RBP17.38■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Gm7347D3YYI9 267 aa17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Speer4aF8VPX6 267 aa17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Fgd1P52734 960 aa17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Rnf180Q3U827 592 aa17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Atxn2lQ7TQH0 1049 aaKnown RBP17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Sf3b3Q921M3 1217 aaKnown RBP17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Ttc5Q99LG4 440 aa17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Mybbp1aQ7TPV4 1344 aaKnown RBP17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Frmpd3A0A140LIW3 1774 aa17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Znf609Q8BZ47 1413 aa17.37■□□□□ 0.37
Ercc1-203ENSMUST00000160369 ArsiQ32KI9 573 aa17.36■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Maco1Q7TQE6 664 aaKnown RBP17.36■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Sgip1Q8VD37 806 aa17.36■□□□□ 0.37
Ercc1-203ENSMUST00000160369 MvpQ9EQK5 861 aa17.36■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Gja10Q9WUS4 505 aa17.36■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Pde3aQ9Z0X4 1141 aa17.36■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Itgb4A2A863 1818 aa17.35■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Olfr247E9PVJ7 320 aa17.35■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Olfr819K7N727 320 aa17.35■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Sde2Q8K1J5 448 aaKnown RBP17.35■□□□□ 0.37
Ercc1-203ENSMUST00000160369 FktnQ8R507 461 aa17.35■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Myo3bQ1EG27 1305 aa17.35■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Ankrd44B2RXR6 993 aa17.34■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Nedd4P46935 887 aaKnown RBP17.34■□□□□ 0.37
Ercc1-203ENSMUST00000160369 EappQ5BU09 281 aa17.34■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Aldh1l2Q8K009 923 aa17.34■□□□□ 0.37
Ercc1-203ENSMUST00000160369 UvssaQ9D479 717 aa17.34■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Psd3Q2PFD7 1037 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Fhdc1Q3ULZ2 1149 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Plcd4Q8K3R3 807 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Pank1Q8K4K6 548 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Cd248Q91V98 765 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 WaslQ91YD9 501 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Rtn4Q99P72 1162 aaKnown RBP17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Dydc2Q9D3X8 139 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Tceal9Q9DD24 104 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Cyp2ab1S4R196 498 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Greb1lB9EJV3 1913 aa17.33■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Stk36Q69ZM6 1316 aa17.32■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Gpr162Q3UN16 588 aa17.32■□□□□ 0.36
Ercc1-203ENSMUST00000160369 GpkowQ56A08 488 aa17.32■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Phf23Q8BSN5 401 aa17.32■□□□□ 0.36
Ercc1-203ENSMUST00000160369 D830030K20RikE9PYQ5 218 aa17.31■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Gm3043K7N693 218 aa17.31■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Gm16440K7N6G6 218 aa17.31■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Gm2244L7N2A3 218 aa17.31■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Gm3278L7N2D2 218 aa17.31■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Gm8271L7N2E2 218 aa17.31■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Ppp1r3fQ9JIG4 799 aa17.31■□□□□ 0.36
Ercc1-203ENSMUST00000160369 4931408C20RikE9PWP9 1381 aa17.3■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Col4a5Q63ZW6 1691 aa17.3■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Gnai2P08752 355 aaKnown RBP17.3■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Snrpa1P57784 255 aaKnown RBP17.3■□□□□ 0.36
Ercc1-203ENSMUST00000160369 EgfrQ01279 1210 aa17.3■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Itga6Q61739 1091 aa17.3■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Ptcd1Q8C2E4 695 aaKnown RBP17.3■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Kif2cQ922S8 721 aa17.3■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Adarb2Q9JI20 745 aa17.3■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Prl3d2F6R3P9 224 aa17.29■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Dok7Q18PE0 504 aa17.29■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Thrap3Q569Z6 951 aaKnown RBP17.29■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Glg1Q61543 1175 aaKnown RBP17.29■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Zcwpw1Q6IR42 630 aa17.29■□□□□ 0.36
Ercc1-203ENSMUST00000160369 InsrrQ9WTL4 1300 aa17.28■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Oas2E9Q9A9 742 aa17.28■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Rps8P62242 208 aaKnown RBP17.28■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Nlrp9bQ66X22 1003 aa17.28■□□□□ 0.36
Ercc1-203ENSMUST00000160369 B4galnt4Q766D5 1034 aa17.28■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Naa16Q9DBB4 864 aa17.28■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Ube4aE9Q735 1028 aa17.27■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Prkar2bP31324 416 aa17.27■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Unc5clQ6R653 518 aa17.27■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Zfp831A2ADM8 1628 aa17.27■□□□□ 0.36
Ercc1-203ENSMUST00000160369 Cyp2c68K7N6C2 491 aa17.25■□□□□ 0.35
Ercc1-203ENSMUST00000160369 VeztQ3ZK22 780 aa17.25■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Spire2Q8K1S6 718 aa17.25■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Sart3Q9JLI8 962 aaKnown RBP17.25■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Nup188Q6ZQH8 1759 aa17.25■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Map3k15A2AQW0 1331 aa17.24■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Flt1P35969 1333 aa17.24■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Klrk1O54709 232 aa17.24■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Tlr7P58681 1050 aa17.24■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Rbm27Q5SFM8 1060 aaKnown RBP17.24■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Dpf2Q61103 391 aaKnown RBP17.24■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Plekho1Q9JIY0 408 aa17.24■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Heg1E9Q7X6 1337 aa17.23■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Vsig10D3YX43 558 aa17.23■□□□□ 0.35
Ercc1-203ENSMUST00000160369 1700029H14RikE9PY36 240 aa17.23■□□□□ 0.35
Ercc1-203ENSMUST00000160369 VgfQ0VGU4 617 aa17.23■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Slc38a10Q5I012 1090 aa17.23■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Tmem87bQ8BKU8 555 aa17.23■□□□□ 0.35
Ercc1-203ENSMUST00000160369 McamQ8R2Y2 648 aaKnown RBP17.23■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Chmp3Q9CQ10 224 aa17.23■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Prl3d3A0A0M6L0J6 224 aa17.22■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Ppef1O35655 650 aa17.22■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Adora1Q60612 326 aa17.22■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Spon1Q8VCC9 807 aa17.22■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Triml2E9PW10 424 aa17.21■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms