RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 AtripQ8BMG1 785 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Pdcd11Q6NS46 1862 aaKnown RBP11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Tnnt1O88346 262 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 F2rP30558 430 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Gjb2Q00977 226 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Kcnk13Q8R1P5 405 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 SufuQ9Z0P7 484 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Gabpb2P81069 414 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Panx2Q6IMP4 677 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Bmp2kQ91Z96 1138 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Q9D9H8 365 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Dnai2A2AC93 623 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Aifm3Q3TY86 605 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Efcab8Q8C9R9 203 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Fam76aQ922G2 307 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Stk26Q99JT2 416 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Cep89Q9CZX2 791 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Cep83Q9D5R3 692 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Dpf1Q9QX66 387 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Uhrf1bp1B2KF50 1429 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Ktn1Q61595 1327 aaKnown RBP11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Prkar2bP31324 416 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Syt1P46096 421 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Ptpdc1Q6NZK8 747 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Tmco3Q8BH01 678 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 ErbinQ80TH2 1402 aa11.92□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Atf3Q60765 181 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Shq1Q7TMX5 569 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Slc5a4bQ91ZP4 660 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Smarcc2Q6PDG5 1213 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Ano10Q8BH79 659 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Ccdc83Q9D4V3 305 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Aox4Q3TYQ9 1336 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Gm3409A0A0G2JE67 319 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Tada3Q8R0L9 432 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Sh2b1Q91ZM2 756 aa11.91□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Mlh1Q9JK91 760 aa11.9□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Mast1Q9R1L5 1570 aa11.9□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Dnm3Q8BZ98 863 aa11.9□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Paf1Q8K2T8 535 aa11.9□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Kri1Q8VDQ9 704 aaKnown RBP11.9□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Gtf3c6Q9D8P7 227 aa11.9□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Nsd2Q8BVE8 1365 aa11.9□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Ms4a2P20490 235 aa11.9□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Maats1Q8BRC6 783 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Aldh1l2Q8K009 923 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Usp16Q99LG0 825 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Scn4aQ9ER60 1841 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Kifc2O08672 792 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Irx1P81068 480 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Ctnna3Q65CL1 895 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 4930550L24RikQ99PA7 320 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Osbpl5Q9ER64 874 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Atp1a4Q9WV27 1032 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Asxl2Q8BZ32 1370 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Ccdc57Q6PHN1 1016 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Smc2Q8CG48 1191 aaKnown RBP11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 PdiltQ9DAN1 588 aa11.89□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Mei4Q8BRM6 389 aa11.88□□□□□ -0.51
Ctc1-202ENSMUST00000116359 NaspQ99MD9 773 aaKnown RBP11.88□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Kcnd1Q03719 651 aa11.88□□□□□ -0.51
Ctc1-202ENSMUST00000116359 MarsQ68FL6 902 aaKnown RBP11.88□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Coro7Q9D2V7 922 aa11.88□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Lnx1O70263 728 aa11.88□□□□□ -0.51
Ctc1-202ENSMUST00000116359 CoblQ5NBX1 1337 aaKnown RBP11.88□□□□□ -0.51
Ctc1-202ENSMUST00000116359 NefhP19246 1090 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Zmym1Q3TJB1 983 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Trim25Q61510 634 aaKnown RBP11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 HypkQ9CR41 129 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Lrrc6O88978 473 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Q66JV7 365 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Etf1Q8BWY3 437 aaKnown RBP11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Atp6v1aP50516 617 aaKnown RBP11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Cct8l1Q80YT3 562 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Anapc4Q91W96 807 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Mis12Q9CY25 206 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Gnai3Q9DC51 354 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 PalmQ9Z0P4 383 aa11.87□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Pde11aP0C1Q2 933 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Zbtb40Q6PCS8 1258 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Zc3h6Q8BYK8 1177 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Tsr2Q8C8T8 191 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Cbx8Q9QXV1 362 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Tbc1d2B1AVH7 922 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Cnbd1B1AWM0 430 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Gnai1B2RSH2 354 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Exoc3l2D3YUP5 789 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Jakmip2D3YXK0 820 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Leo1Q5XJE5 667 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Usp54Q8BL06 1588 aaKnown RBP11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Myo3aQ8K3H5 1613 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Stag3O70576 1240 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Def6Q8C2K1 630 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Evc2Q8K1G2 1220 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Klhdc4Q921I2 584 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Stk11Q9WTK7 436 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Ccdc121E9Q6D3 323 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Evi5P97366 809 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Ints4Q8CIM8 964 aa11.86□□□□□ -0.51
Ctc1-202ENSMUST00000116359 HnrnpmQ9D0E1 729 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms