RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Taf7Q9R1C0 341 aa17.81■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Nop53Q8BK35 484 aaKnown RBP17.81■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Slf2Q6P9P0 1278 aa17.81■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Klhl10Q9D5V2 608 aa17.81■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ddx46Q569Z5 1032 aaKnown RBP17.81■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Rdm1Q9CQK3 281 aa17.81■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Sycp2lA0A0M3U1B0 842 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ift88Q61371 824 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Hand2Q61039 217 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Pde1cQ64338 706 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Amotl1Q9D4H4 968 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Grm8P47743 908 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 VeztQ3ZK22 780 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Fam83gQ5SWY7 812 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 CebpzP53569 1052 aaKnown RBP17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Smarcc1P97496 1104 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ttc5Q99LG4 440 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 WtapQ9ER69 396 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Syt10Q9R0N4 523 aa17.8■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ccdc122Q8BVN0 290 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Vamp4O70480 141 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 ParvgQ9ERD8 331 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 BC005561E9Q5E2 1589 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Zfp853A0A1D5RM95 733 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ccdc121E9Q6D3 323 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Dnm1P39053 867 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 GnpatP98192 678 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Sbno1Q689Z5 1390 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Arhgef18Q6P9R4 1021 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Als2cr12Q8BVM7 383 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Krt79Q8VED5 531 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Chd1lQ9CXF7 900 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Zbtb43Q9DAI4 467 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 NpcdF8VQB8 469 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Tyro3P55144 880 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ccdc162pQ0VG85 912 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Farp2Q91VS8 1065 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Klhdc4Q921I2 584 aa17.79■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Atp8b3Q6UQ17 1335 aa17.78■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Prr29B1ARI9 187 aa17.78■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ces1aE9PYP1 563 aa17.78■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Sh3d21Q7TSG5 549 aa17.78■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Klhl30Q8C3F7 581 aa17.78■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ccdc42Q5SV66 316 aa17.78■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Fam76aQ922G2 307 aa17.78■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Rapgef3Q8VCC8 918 aa17.78■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Esyt1Q3U7R1 1092 aaKnown RBP17.77■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Cyp7a1Q64505 503 aa17.77■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ssrp1Q08943 708 aaKnown RBP17.77■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Tax1bp1Q3UKC1 814 aaKnown RBP17.77■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Trappc8E9PWG2 1437 aa17.77■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Zbtb21E9Q444 1094 aa17.77■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Tubb5P99024 444 aaKnown RBP17.77■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Naip7Q9JIB3 1402 aa17.77■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Naip6Q9JIB6 1403 aa17.77■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Wdr7Q920I9 1489 aa17.77■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 GnaqP21279 359 aa17.77■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Kif2aP28740 705 aa17.77■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ano1Q8BHY3 960 aa17.77■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Iffo1Q8BXL9 562 aa17.77■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 GptQ8QZR5 496 aa17.77■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Vps16Q920Q4 839 aa17.77■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Pola1P33609 1465 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Tbc1d8Q9Z1A9 1134 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ifit1bl2Q3U687 466 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Nek11Q8C0Q4 628 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Serpina10Q8R121 448 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Bloc1s4Q8VED2 215 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Cnot6lQ8VEG6 555 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Tbc1d5Q80XQ2 815 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Setdb1O88974 1307 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Sptlc2P97363 560 aaKnown RBP17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 IqcgQ80W32 419 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 StambpQ9CQ26 424 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Lmbr1lQ9D1E5 489 aa17.76■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Syt1P46096 421 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 RragbQ6NTA4 374 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Serpinb6bO08804 377 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Triml1Q8BVP1 470 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ppfibp1Q8C8U0 969 aaKnown RBP17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Pde3aQ9Z0X4 1141 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Zkscan4Q5SZT6 480 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Kiaa1524Q8BWY9 907 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 GckrQ91X44 587 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Dync1i1O88485 628 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Skor1Q8BX46 964 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Nsfl1cQ9CZ44 370 aaKnown RBP17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Rufy3Q9D394 469 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Hip1rQ9JKY5 1068 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Astn2Q80Z10 1352 aa17.75■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Prim1P20664 417 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Zfp42P22227 288 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 BrapQ99MP8 591 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Mug2P28666 1451 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Stx8O88983 236 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Tmx3Q8BXZ1 456 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 ClasrpQ8CFC7 668 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Vps36Q91XD6 386 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 NsmfQ99NF2 532 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ankrd50F7BE84 1390 aa17.74■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms