RNA–Protein interactions for RNA: ENSMUST00000115578.9

Ufd1-202, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ufd1, Length 2,078 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-202ENSMUST00000115578 Abcc4E9Q236 1325 aa13.69□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Fbxo41Q6NS60 873 aa13.69□□□□□ -0.22
Ufd1-202ENSMUST00000115578 PtmsQ9D0J8 101 aaKnown RBP13.69□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Plcb2A3KGF7 1181 aa13.68□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Ccdc146E9Q9F7 977 aa13.68□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Myd88P22366 296 aa13.68□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Cwc25Q9DBF7 416 aa13.68□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Slc4a10Q5DTL9 1118 aa13.68□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Adora1Q60612 326 aa13.68□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Ankib1Q6ZPS6 1085 aa13.68□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Kif2cQ922S8 721 aa13.68□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Ush1cQ9ES64 910 aa13.68□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Bicdl1A0JNT9 577 aa13.67□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Gm13023A2A8N2 498 aa13.67□□□□□ -0.22
Ufd1-202ENSMUST00000115578 ArxO35085 564 aa13.67□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Ddit3P35639 168 aa13.67□□□□□ -0.22
Ufd1-202ENSMUST00000115578 CoblQ5NBX1 1337 aaKnown RBP13.66□□□□□ -0.22
Ufd1-202ENSMUST00000115578 AtrnQ9WU60 1428 aa13.66□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Lekr1B2RVN1 116 aa13.66□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Fkbp1aP26883 108 aaKnown RBP13.66□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Cyp19a1P28649 503 aa13.66□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Mcm2P97310 904 aa13.66□□□□□ -0.22
Ufd1-202ENSMUST00000115578 GpkowQ56A08 488 aa13.66□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Gnl3lQ6PGG6 577 aaKnown RBP13.66□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Ubr3Q5U430 1889 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Mfap1aC0HKD8 439 aaKnown RBP13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Mfap1bC0HKD9 439 aaKnown RBP13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Spryd3E9Q9B3 442 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Gnat3Q3V3I2 354 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Zbtb3Q91X45 518 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Stard3nlQ9DCI3 235 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Trip6Q9Z1Y4 480 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Lrp5Q91VN0 1614 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Jarid2Q62315 1234 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Ppp6r1Q7TSI3 856 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Clca2Q8BG22 942 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Fam213aQ9CYH2 218 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Bcar3Q9QZK2 820 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Cyp46a1Q9WVK8 500 aa13.65□□□□□ -0.22
Ufd1-202ENSMUST00000115578 Nlrp3Q8R4B8 1033 aa13.64□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Rapgef4Q9EQZ6 1011 aa13.64□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Col22a1E9Q7P1 1613 aa13.64□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Dhx16G3X8X0 1044 aaKnown RBP13.63□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Becn1O88597 448 aa13.63□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Ets1P27577 440 aa13.63□□□□□ -0.23
Ufd1-202ENSMUST00000115578 GalcP54818 684 aa13.63□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Smarcc1P97496 1104 aa13.63□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Esco1Q69Z69 843 aa13.63□□□□□ -0.23
Ufd1-202ENSMUST00000115578 ImpactO55091 318 aa13.63□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Strn4P58404 760 aa13.63□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Snai1Q02085 264 aa13.62□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Igflr1Q3U4N7 345 aa13.62□□□□□ -0.23
Ufd1-202ENSMUST00000115578 1700010I14RikQ7TPG0 532 aa13.62□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Edc3Q8K2D3 508 aaKnown RBP13.62□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Dpf1Q9QX66 387 aa13.62□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Tpx2A2APB8 745 aaKnown RBP13.62□□□□□ -0.23
Ufd1-202ENSMUST00000115578 SowahdQ8BY98 327 aa13.62□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Glipr1l2Q9CQ35 332 aa13.62□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Col11a2Q64739 1736 aa13.61□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Ubap1lG3UW59 384 aa13.61□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Cct4P80315 539 aaKnown RBP13.61□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Plcb3P51432 1234 aaKnown RBP13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Tbc1d9Q3UYK3 1264 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Kiaa0319Q5SZV5 1081 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Ptpdc1Q6NZK8 747 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Slf2Q6P9P0 1278 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Tmx3Q8BXZ1 456 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Foxo4Q9WVH3 505 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Tnnt2P50752 301 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Dhx38Q80X98 1228 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Tmem87bQ8BKU8 555 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Ttc19Q8CC21 365 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 CenppQ9CZ92 286 aa13.6□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Duox1A2AQ92 1551 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Prr29B1ARI9 187 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Atg9aQ68FE2 551 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Susd4Q8BH32 490 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 GptQ8QZR5 496 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Nek4Q9Z1J2 792 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Prl3d3A0A0M6L0J6 224 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Prl3d2F6R3P9 224 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Casq1O09165 405 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 SlkO54988 1233 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Znf326O88291 580 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Atp1b3P97370 278 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Sugp2Q8CH09 1067 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 LratQ9JI60 231 aa13.59□□□□□ -0.23
Ufd1-202ENSMUST00000115578 Cops6O88545 324 aa13.58□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Lrrc43Q3V0L5 667 aa13.58□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Fam228bQ497Q6 232 aa13.58□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Q8BT18 775 aa13.58□□□□□ -0.24
Ufd1-202ENSMUST00000115578 RestQ8VIG1 1082 aa13.58□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Cyp2c23E9Q5K4 494 aa13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 CalcaP70160 136 aa13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Rtkn2Q14B46 604 aa13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 4930504O13RikQ8C5Z9 145 aa13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Dis3l2Q8CI75 870 aaKnown RBP13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Dhx30Q99PU8 1217 aaKnown RBP13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Nsfl1cQ9CZ44 370 aaKnown RBP13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Mybbp1aQ7TPV4 1344 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms