RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Ifit1Q64282 463 aa12.16□□□□□ -0.46
Trim17-201ENSMUST00000047697 Cep135Q6P5D4 1140 aa12.16□□□□□ -0.46
Trim17-201ENSMUST00000047697 4930504O13RikQ8C5Z9 145 aa12.16□□□□□ -0.46
Trim17-201ENSMUST00000047697 Otud6bQ8K2H2 294 aa12.16□□□□□ -0.46
Trim17-201ENSMUST00000047697 Lnx1O70263 728 aa12.16□□□□□ -0.46
Trim17-201ENSMUST00000047697 Ddx46Q569Z5 1032 aaKnown RBP12.16□□□□□ -0.46
Trim17-201ENSMUST00000047697 GpkowQ56A08 488 aa12.16□□□□□ -0.46
Trim17-201ENSMUST00000047697 Chmp7Q8R1T1 451 aa12.16□□□□□ -0.46
Trim17-201ENSMUST00000047697 Mdc1Q5PSV9 1707 aa12.15□□□□□ -0.46
Trim17-201ENSMUST00000047697 Grm8P47743 908 aa12.15□□□□□ -0.46
Trim17-201ENSMUST00000047697 Plcd1Q8R3B1 756 aa12.15□□□□□ -0.46
Trim17-201ENSMUST00000047697 NktrP30415 1453 aa12.15□□□□□ -0.46
Trim17-201ENSMUST00000047697 Rhot2Q8JZN7 620 aa12.15□□□□□ -0.46
Trim17-201ENSMUST00000047697 Rnf123Q5XPI3 1314 aa12.15□□□□□ -0.46
Trim17-201ENSMUST00000047697 Bin1O08539 588 aaKnown RBP12.15□□□□□ -0.47
Trim17-201ENSMUST00000047697 Cers3Q1A3B0 383 aa12.15□□□□□ -0.47
Trim17-201ENSMUST00000047697 Larp1Q6ZQ58 1072 aaKnown RBP12.15□□□□□ -0.47
Trim17-201ENSMUST00000047697 Zfp113Q8C689 439 aa12.15□□□□□ -0.47
Trim17-201ENSMUST00000047697 Pms1Q8K119 917 aa12.15□□□□□ -0.47
Trim17-201ENSMUST00000047697 GckrQ91X44 587 aa12.15□□□□□ -0.47
Trim17-201ENSMUST00000047697 Rab3gap1Q80UJ7 981 aa12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Rps6kb1Q8BSK8 525 aa12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Add2Q9QYB8 725 aa12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Gemin5Q8BX17 1502 aaKnown RBP12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Kif20bQ80WE4 1774 aaKnown RBP12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Mtx1P47802 317 aa12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Frat1P70339 274 aa12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Ercc6l2Q9JIM3 1537 aa12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Rbbp8nlA2ABX0 614 aa12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Dync1i1O88485 628 aa12.14□□□□□ -0.47
Trim17-201ENSMUST00000047697 Spef2Q8C9J3 1734 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Limch1Q3UH68 1057 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Fam228bQ497Q6 232 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 TrhQ62361 256 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Ltv1Q6NSQ7 470 aaKnown RBP12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Atp1a3Q6PIC6 1013 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Zfp397Q7TNK4 527 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Stk38Q91VJ4 465 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Amotl1Q9D4H4 968 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Atp8b3Q6UQ17 1335 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Cfap99A0A140LIX9 648 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 1700006A11RikB9EHI3 544 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Tubb6Q922F4 447 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Aox1O54754 1333 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Eef2kO08796 724 aa12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 Arid5bQ8BM75 1188 aaKnown RBP12.13□□□□□ -0.47
Trim17-201ENSMUST00000047697 IghaA0A0A6YXW6 389 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Ano10Q8BH79 659 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Slc35g1Q8BY79 368 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Ccdc158Q8CDI6 1109 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 CenpqQ9CPQ5 267 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Atg3Q9CPX6 314 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Chd4Q6PDQ2 1915 aaKnown RBP12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Tmem94Q7TSH8 1360 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Stx1aO35526 288 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Vps54Q5SPW0 977 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Ttc27Q8CD92 847 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Inpp5bQ8K337 993 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 LratQ9JI60 231 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Parp14Q2EMV9 1817 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 1700113H08RikE9Q9Q5 327 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 PnnO35691 725 aaKnown RBP12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Tpm1P58771 284 aa12.12□□□□□ -0.47
Trim17-201ENSMUST00000047697 Lins1Q3U1D0 764 aa12.11□□□□□ -0.47
Trim17-201ENSMUST00000047697 Ppp1r10Q80W00 888 aaKnown RBP12.11□□□□□ -0.47
Trim17-201ENSMUST00000047697 Rrs1Q9CYH6 365 aaKnown RBP12.11□□□□□ -0.47
Trim17-201ENSMUST00000047697 Spty2d1Q68FG3 682 aa12.11□□□□□ -0.47
Trim17-201ENSMUST00000047697 Kank4Q6P9J5 1016 aa12.11□□□□□ -0.47
Trim17-201ENSMUST00000047697 Rec8Q8C5S7 591 aa12.11□□□□□ -0.47
Trim17-201ENSMUST00000047697 Lrrfip2Q91WK0 415 aa12.11□□□□□ -0.47
Trim17-201ENSMUST00000047697 Hmg20bQ9Z104 317 aa12.11□□□□□ -0.47
Trim17-201ENSMUST00000047697 AglF8VPN4 1532 aa12.11□□□□□ -0.47
Trim17-201ENSMUST00000047697 Golim4Q8BXA1 655 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Nlrp3Q8R4B8 1033 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Ifi35Q9D8C4 286 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Osbpl5Q9ER64 874 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Abcc4E9Q236 1325 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Ccdc112A0AUP1 442 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Vgll3P85442 326 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Zkscan4Q5SZT6 480 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Drc7Q6V3W6 876 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Dnajc10Q9DC23 793 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Znf335A2A5K6 1337 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 AdgbG3UZ78 1657 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Kansl3A2RSY1 903 aaKnown RBP12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Lmbrd2Q8C561 694 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Mtmr3Q8K296 1196 aa12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Mrpl44Q9CY73 333 aaKnown RBP12.1□□□□□ -0.47
Trim17-201ENSMUST00000047697 Cplx1P63040 134 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 SympkQ80X82 1284 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Dhx38Q80X98 1228 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 TefQ9JLC6 301 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Znf326O88291 580 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Hspa2P17156 633 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Hand2Q61039 217 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Soga3Q6NZL0 945 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Rufy2Q8R4C2 606 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 Luzp1Q8R4U7 1068 aaKnown RBP12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 MpndQ3TV65 487 aa12.09□□□□□ -0.47
Trim17-201ENSMUST00000047697 L1td1Q587J6 782 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms