RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Rnf123Q5XPI3 1314 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Igsf1Q7TQA1 1317 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 PplQ9R269 1755 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 FanccP50652 591 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Inpp5bQ8K337 993 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Chmp3Q9CQ10 224 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 RictorQ6QI06 1708 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Kansl3A2RSY1 903 aaKnown RBP12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Gm10471E9Q1C7 252 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Fyb1O35601 819 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Hspa2P17156 633 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Cers3Q1A3B0 383 aa12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 PsapQ61207 557 aaKnown RBP12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Arid5bQ8BM75 1188 aaKnown RBP12.18□□□□□ -0.46
Clip3-201ENSMUST00000014065 Cnksr1A2A9K7 700 aa12.17□□□□□ -0.46
Clip3-201ENSMUST00000014065 Zfp113Q8C689 439 aa12.17□□□□□ -0.46
Clip3-201ENSMUST00000014065 Ddx46Q569Z5 1032 aaKnown RBP12.17□□□□□ -0.46
Clip3-201ENSMUST00000014065 Cfap58B2RW38 873 aa12.17□□□□□ -0.46
Clip3-201ENSMUST00000014065 GckrQ91X44 587 aa12.17□□□□□ -0.46
Clip3-201ENSMUST00000014065 LratQ9JI60 231 aa12.17□□□□□ -0.46
Clip3-201ENSMUST00000014065 MyclP10166 368 aa12.16□□□□□ -0.46
Clip3-201ENSMUST00000014065 Mtx1P47802 317 aa12.16□□□□□ -0.46
Clip3-201ENSMUST00000014065 GpkowQ56A08 488 aa12.16□□□□□ -0.46
Clip3-201ENSMUST00000014065 Grm8P47743 908 aa12.16□□□□□ -0.46
Clip3-201ENSMUST00000014065 Irf9Q61179 399 aa12.16□□□□□ -0.46
Clip3-201ENSMUST00000014065 Larp1Q6ZQ58 1072 aaKnown RBP12.16□□□□□ -0.46
Clip3-201ENSMUST00000014065 Plcd1Q8R3B1 756 aa12.16□□□□□ -0.46
Clip3-201ENSMUST00000014065 Eef2kO08796 724 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Stat1P42225 749 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Cnnm1Q0GA42 951 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Lins1Q3U1D0 764 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Ltv1Q6NSQ7 470 aaKnown RBP12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Atp1a3Q6PIC6 1013 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Dhx38Q80X98 1228 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Rps6kb1Q8BSK8 525 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Ift57Q8BXG3 429 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Srgap1Q91Z69 1062 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Msh6P54276 1358 aaKnown RBP12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Tmem94Q7TSH8 1360 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Bin1O08539 588 aaKnown RBP12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Vps54Q5SPW0 977 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Nlrp3Q8R4B8 1033 aa12.15□□□□□ -0.46
Clip3-201ENSMUST00000014065 Frat1P70339 274 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Ctdnep1Q3TP92 244 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Cep135Q6P5D4 1140 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Fsd1Q7TPM6 496 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Rab3gap1Q80UJ7 981 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 MpndQ3TV65 487 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Gpatch3Q8BIY1 525 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Slc39a6Q8C145 765 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Ubxn4Q8VCH8 506 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Mical1Q8VDP3 1048 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Dnajc10Q9DC23 793 aa12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Mybbp1aQ7TPV4 1344 aaKnown RBP12.14□□□□□ -0.47
Clip3-201ENSMUST00000014065 Zc3h13E9Q784 1729 aaKnown RBP12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 Rbbp8nlA2ABX0 614 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 1700113H08RikE9Q9Q5 327 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 Pcdhb15Q91Y04 786 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 AceP09470 1312 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 Tbc1d30Q69ZT9 766 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 Slu7Q8BHJ9 585 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 Lmbrd2Q8C561 694 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 Amotl1Q9D4H4 968 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 Pnpla7A2AJ88 1352 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 Nwd1A6H603 1563 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 SympkQ80X82 1284 aa12.13□□□□□ -0.47
Clip3-201ENSMUST00000014065 Pms1Q8K119 917 aa12.12□□□□□ -0.47
Clip3-201ENSMUST00000014065 Atg3Q9CPX6 314 aa12.12□□□□□ -0.47
Clip3-201ENSMUST00000014065 Ifi35Q9D8C4 286 aa12.12□□□□□ -0.47
Clip3-201ENSMUST00000014065 Pus3Q9JI38 481 aa12.12□□□□□ -0.47
Clip3-201ENSMUST00000014065 PhaxQ9JJT9 385 aaKnown RBP12.12□□□□□ -0.47
Clip3-201ENSMUST00000014065 Abcc4E9Q236 1325 aa12.12□□□□□ -0.47
Clip3-201ENSMUST00000014065 Nkx2-3P97334 362 aa12.12□□□□□ -0.47
Clip3-201ENSMUST00000014065 Ccz1Q8C1Y8 480 aa12.12□□□□□ -0.47
Clip3-201ENSMUST00000014065 Lrrfip2Q91WK0 415 aa12.12□□□□□ -0.47
Clip3-201ENSMUST00000014065 Adcy9P51830 1353 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Gm45140A0A0N4SUM8 220 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Adora1Q60612 326 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Zfp397Q7TNK4 527 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Dmrt2Q8BG36 561 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Fam43aQ8BUP8 424 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Ccdc158Q8CDI6 1109 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Chmp7Q8R1T1 451 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Eif3aP23116 1344 aaKnown RBP12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Hoxa7P02830 229 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Ap5z1Q3U829 807 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Rrs1Q9CYH6 365 aaKnown RBP12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Cdk12Q14AX6 1484 aaKnown RBP12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Znf335A2A5K6 1337 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Aox1O54754 1333 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 1700006A11RikB9EHI3 544 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 L1td1Q587J6 782 aaKnown RBP12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 TfrcQ62351 763 aaKnown RBP12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Golim4Q8BXA1 655 aa12.11□□□□□ -0.47
Clip3-201ENSMUST00000014065 Ttll7A4Q9F0 912 aa12.1□□□□□ -0.47
Clip3-201ENSMUST00000014065 Prl7a2O54831 253 aa12.1□□□□□ -0.47
Clip3-201ENSMUST00000014065 Limch1Q3UH68 1057 aa12.1□□□□□ -0.47
Clip3-201ENSMUST00000014065 Usp28Q5I043 1051 aa12.1□□□□□ -0.47
Clip3-201ENSMUST00000014065 Hand2Q61039 217 aa12.1□□□□□ -0.47
Clip3-201ENSMUST00000014065 Zfp317Q8C0Q5 607 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms