RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 ZNF619Q8N2I2 560 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 SPEM1Q8N4L4 309 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 OR7G2Q8NG99 324 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 OR6C4Q8NGE1 309 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 OR4D11Q8NGI4 311 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 OR52J3Q8NH60 311 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 SLC7A13Q8TCU3 470 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 GNPDA2Q8TDQ7 276 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 GAB3Q8WWW8 586 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 JPH3Q8WXH2 748 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ACOT11Q8WXI4 607 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 DIO2Q92813 273 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 UCN3Q969E3 161 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 CLDN23Q96B33 292 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MVB12AQ96EY5 273 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 OTUB1Q96FW1 271 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 SLC6A18Q96N87 628 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 DACH2Q96NX9 599 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 CCDC3Q9BQI4 270 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 LMF2Q9BU23 707 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 RSPO3Q9BXY4 272 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ITPAQ9BY32 194 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 POLDIP3Q9BY77 421 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 TCEAL2Q9H3H9 227 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ERVMER34-1Q9H9K5 563 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 PLGRKTQ9HBL7 147 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MAN2C1Q9NTJ4 1040 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MED17Q9NVC6 651 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MRPS18AQ9NVS2 196 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 CLN6Q9NWW5 311 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ERVK-18Q9QC07 812 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ADAM30Q9UKF2 790 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 MKLN1Q9UL63 735 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 KLHL20Q9Y2M5 609 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 WDR45Q9Y484 360 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 CSNK1G3Q9Y6M4 447 aa6.24□□□□□ -1.41
CTNNA1-228ENST00000521640 ARHGEF17Q96PE2 2063 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 LOC105369274A0A096LPK9 316 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CCDC163A0A0D9SF12 145 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 LOC102723532A0A0G2JNH3 316 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 A0A1W2PPW3 197 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 HTR3EA5X5Y0 456 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 H0YIG0 161 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 AP3D1O14617 1153 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 SCAMP1O15126 338 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 STX11O75558 287 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CYP7B1O75881 506 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CLPXO76031 633 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 NKX2-2O95096 273 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 HTR3BO95264 441 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 PROS1P07225 676 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 C8orf89P0DMQ9 161 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CDK4P11802 303 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 RNH1P13489 461 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CDH3P22223 829 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 FPR3P25089 353 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 HOXA6P31267 233 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 UGT2B10P36537 528 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 STAT5AP42229 794 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 GABRA4P48169 554 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 SERPINB10P48595 397 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 GSSP48637 474 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 IDH2P48735 452 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 SMSP52788 366 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 PRKAG1P54619 331 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 PSMD4P55036 377 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 NXPH1P58417 271 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 TAS2R41P59536 307 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 EEF1A1P68104 462 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 TUBA1BP68363 451 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 SIM1P81133 766 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CDK5Q00535 292 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 RHAGQ02094 409 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 TFF2Q03403 129 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CHRNEQ04844 493 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 TSPAN31Q12999 210 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 SERTAD2Q14140 314 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 GANABQ14697 944 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 NR1D2Q14995 579 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 NCF4Q15080 339 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CTF1Q16619 201 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 MOGQ16653 247 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 NKPD1Q17RQ9 610 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 ZNF829Q3KNS6 432 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 TIMM50Q3ZCQ8 353 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 MFSD4BQ5TF39 518 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 YOD1Q5VVQ6 348 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 SLC6A19Q695T7 634 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 TYW3Q6IPR3 259 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 RPL13AP3Q6NVV1 102 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 FAM180BQ6P0A1 224 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 PODNL1Q6PEZ8 512 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CASP12Q6UXS9 341 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 RASSF6Q6ZTQ3 369 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 AHSA2Q719I0 299 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 TUBA1AQ71U36 451 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 RANBP3LQ86VV4 465 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 KMT5CQ86Y97 462 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 GRAMD2AQ8IUY3 354 aa6.23□□□□□ -1.41
CTNNA1-228ENST00000521640 CCDC103Q8IW40 242 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms