RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 TMEM100Q9NV29 134 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 A0A1W2PQL4 384 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 M0QZK8 103 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 GGCTO75223 188 aaKnown RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 CNTN5O94779 1100 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 ALDOBP05062 364 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 BMP2P12643 396 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 CD1DP15813 335 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 TNFRSF1BP20333 461 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SLC15A4Q8N697 577 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 IL17RCQ8NAC3 791 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SMOXQ9NWM0 555 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 WASH4PA8MWX3 477 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SEC14L5O43304 696 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 JUPP14923 745 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SOX3P41225 446 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 PAFAH1B3Q15102 231 aaKnown RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SF3B4Q15427 424 aaKnown RBP eCLIP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 C6orf141Q5SZD1 244 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 CNKSR3Q6P9H4 555 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 OR5W2Q8NH69 310 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 RSC1A1Q92681 617 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SGCZQ96LD1 299 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 PIGMQ9H3S5 423 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 RLIMQ9NVW2 624 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 PPP1R14DQ9NXH3 145 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 IL20RAQ9UHF4 553 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 LOXHD1Q8IVV2 1947 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 C1orf226A1L170 272 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 FTCDNL1E5RQL4 147 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 POU4F3Q15319 338 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SPRYD7Q5W111 196 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 ABLIM2Q6H8Q1 611 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 ZNF578Q96N58 590 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SNCGO76070 127 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 MT-ND4P03905 459 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 HOXB2P14652 356 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 TIA1P31483 386 aaKnown RBP eCLIP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 RRAS2P62070 204 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 GALNT2Q10471 571 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 TMEM115Q12893 351 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 TECRLQ5HYJ1 363 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 NLGN4XQ8N0W4 816 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 OR2M4Q96R27 311 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 DEFB126Q9BYW3 111 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 FN3KRPQ9HA64 309 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 B4GALT7Q9UBV7 327 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 PLIN4Q96Q06 1357 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 LRRC37A3O60309 1634 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 NUPL2O15504 423 aaKnown RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SCGB1D1O95968 90 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 ASGR2P07307 311 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 BMP1P13497 986 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 TPT1P13693 172 aaKnown RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 PGCP20142 388 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SCNN1AP37088 669 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 EIF2B1Q14232 305 aaKnown RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 BLOC1S3Q6QNY0 202 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 TMEM150AQ86TG1 271 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SLC35F2Q8IXU6 374 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 ZDHHC14Q8IZN3 488 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 GLIS1Q8NBF1 620 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SYNPRQ8TBG9 265 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SFXN5Q8TD22 340 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 C12orf42Q96LP6 360 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 VPS25Q9BRG1 176 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 ANKRD60Q9BZ19 345 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 KCNK12Q9HB15 430 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 CD300AQ9UGN4 299 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SLC7A7Q9UM01 511 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 PRICKLE3O43900 615 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SULT1A2P50226 295 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 UBE2NP61088 152 aaKnown RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 RTL10Q7L3V2 364 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 KCTD20Q7Z5Y7 419 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 ZNF679Q8IYX0 411 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 TOMM40LQ969M1 308 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 APMAPQ9HDC9 416 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 TRAV18A0A075B6X5 111 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 PMM2O15305 246 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 HPGDSO60760 199 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 IL1AP01583 271 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 CCL14Q16627 93 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 CLPPQ16740 277 aaPredicted RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 ACTBL2Q562R1 376 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 C6orf136Q5SQH8 315 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 OR4C11Q6IEV9 310 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 RNF111Q6ZNA4 994 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 C6orf120Q7Z4R8 191 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 COMMD1Q8N668 190 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 LRFN5Q96NI6 719 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SAMD10Q9BYL1 202 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 TMEM181Q9P2C4 612 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 FECHP22830 423 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 SNCAP37840 140 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 OPRL1P41146 370 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 PGGT1BP53609 377 aa5.27□□□□□ -1.57
CPSF2-201ENST00000298875 RPP30P78346 268 aaKnown RBP5.27□□□□□ -1.57
CPSF2-201ENST00000298875 DBPQ10586 325 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms