RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 TCRBP04435 133 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 LTBRP36941 435 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 ZNF805Q5CZA5 627 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 ARSIQ5FYB1 569 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 C1orf94Q6P1W5 598 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 AGTRAPQ6RW13 159 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 DEF8Q6ZN54 512 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 COMMD6Q7Z4G1 85 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 OR5AK3PQ8NH89 298 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 ASZ1Q8WWH4 475 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 CIDECQ96AQ7 238 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-201ENST00000361909 TRMT61BQ9BVS5 477 aaKnown RBP17.87■□□□□ 0.45
CMTM3-201ENST00000361909 DLL4Q9NR61 685 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 COL4A3Q01955 1670 aa17.87■□□□□ 0.45
CMTM3-201ENST00000361909 GPR171O14626 319 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 RGS9O75916 674 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 NPR2P20594 1047 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 PTSQ03393 145 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 C2orf80Q0P641 193 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 MESP2Q0VG99 397 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 MAP4K2Q12851 820 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 MPEG1Q2M385 716 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 HNRNPA1L2Q32P51 320 aaKnown RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 KIAA1324Q6UXG2 1013 aaKnown RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 OR56A3Q8NH54 315 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 TEX47Q8TBZ9 253 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 C16orf78Q8WTQ4 265 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 FGF14Q92915 247 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 DPYSL5Q9BPU6 564 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 KXD1Q9BQD3 176 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 COQ3Q9NZJ6 369 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 ACSL5Q9ULC5 683 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 LIPT1Q9Y234 373 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 MUC22E2RYF6 1773 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 EDDM13A0A1B0GTR0 161 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 SEMA7AO75326 666 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 ATP1B2P14415 290 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 PRKACAP17612 351 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 NUP62P37198 522 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 EIF2B5Q13144 721 aaKnown RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 ATP13A5Q4VNC0 1218 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 SLC27A4Q6P1M0 643 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 CHRDL2Q6WN34 429 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 NUDT18Q6ZVK8 323 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 TSPAN33Q86UF1 283 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 CMIPQ8IY22 773 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 OR2T4Q8NH00 348 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 CEP76Q8TAP6 659 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 SLC38A5Q8WUX1 472 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 TMED9Q9BVK6 235 aa17.86■□□□□ 0.45
CMTM3-201ENST00000361909 STOX2Q9P2F5 926 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 ZNF624Q9P2J8 865 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 DNMT3AQ9Y6K1 912 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-201ENST00000361909 CCDC88CQ9P219 2028 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 TBC1D3BA6NDS4 549 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 ITGA10O75578 1167 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 NCR1O76036 304 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 PRNPP04156 253 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 BCHEP06276 602 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 CTSLP07711 333 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 ACSM4P0C7M7 580 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 GDI1P31150 447 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 ITPRIPL2Q3MIP1 535 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 FNDC3BQ53EP0 1204 aaKnown RBP17.85■□□□□ 0.45
CMTM3-201ENST00000361909 ACSM5Q6NUN0 579 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 ASB18Q6ZVZ8 466 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 MS4A15Q8N5U1 240 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 SMRP1Q8NCR6 262 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 TMIEQ8NEW7 156 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 WDR34Q96EX3 536 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 TMEM19Q96HH6 336 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 KLHL15Q96M94 604 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 IL20Q9NYY1 176 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 A4GNTQ9UNA3 340 aa17.85■□□□□ 0.45
CMTM3-201ENST00000361909 TRAV6A0A075B6T7 132 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 AGRPO00253 132 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 SLCO2B1O94956 709 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 IGHA1P01876 353 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 CXCL3P19876 107 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 MMP11P24347 488 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 LCN1P31025 176 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 NAE1Q13564 534 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 PODNL1Q6PEZ8 512 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 OR4K5Q8NGD3 323 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 ST8SIA4Q92187 359 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 EFCAB11Q9BUY7 163 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 SHARPINQ9H0F6 387 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 TBC1D17Q9HA65 648 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 PRM3Q9NNZ6 103 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 B4GALT6Q9UBX8 382 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 SHISA3A0PJX4 238 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 ARHGEF33A8MVX0 844 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 UBXN7O94888 489 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 CATP04040 527 aaKnown RBP17.84■□□□□ 0.45
CMTM3-201ENST00000361909 TIMP2P16035 220 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 CD53P19397 219 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 VIPR1P32241 457 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 IFNGR2P38484 337 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 MAP2K6P52564 334 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 DHODHQ02127 395 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms