RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 TPPP3Q9BW30 176 aa4.37□□□□□ -1.71
CHD1-206ENST00000511067 PUS3Q9BZE2 481 aaKnown RBP4.37□□□□□ -1.71
CHD1-206ENST00000511067 FARSBQ9NSD9 589 aaKnown RBP4.37□□□□□ -1.71
CHD1-206ENST00000511067 FAM120CQ9NX05 1096 aaKnown RBP4.37□□□□□ -1.71
CHD1-206ENST00000511067 IMPAD1Q9NX62 359 aa4.37□□□□□ -1.71
CHD1-206ENST00000511067 CLEC5AQ9NY25 188 aa4.37□□□□□ -1.71
CHD1-206ENST00000511067 BARX2Q9UMQ3 279 aaPredicted RBP4.37□□□□□ -1.71
CHD1-206ENST00000511067 CSAG2Q9Y5P2 127 aa4.37□□□□□ -1.71
CHD1-206ENST00000511067 COL5A2P05997 1499 aaPredicted RBP4.37□□□□□ -1.71
CHD1-206ENST00000511067 E9PAM4 449 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 CLDN5O00501 218 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 FAM200BP0CF97 657 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 BCKDHAP12694 445 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 GATA1P15976 413 aaPredicted RBP4.36□□□□□ -1.71
CHD1-206ENST00000511067 CAPN2P17655 700 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 KIF5BP33176 963 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 CYLC1P35663 651 aaPredicted RBP4.36□□□□□ -1.71
CHD1-206ENST00000511067 RPS6P62753 249 aaKnown RBP4.36□□□□□ -1.71
CHD1-206ENST00000511067 ZFP36L1Q07352 338 aaKnown RBP4.36□□□□□ -1.71
CHD1-206ENST00000511067 CRMP1Q14194 572 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 UBE2V2Q15819 145 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 PPP1R3AQ16821 1122 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 DCST2Q5T1A1 773 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 LGSNQ5TDP6 509 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 ZNF600Q6ZNG1 722 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 OR6T1Q8NGN1 323 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 RFESDQ8TAC1 157 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 FAM222BQ8WU58 562 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 TADA1Q96BN2 335 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 DTNBP1Q96EV8 351 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 ZBED6CLQ96FA7 236 aaPredicted RBP4.36□□□□□ -1.71
CHD1-206ENST00000511067 PIWIL1Q96J94 861 aaKnown RBP4.36□□□□□ -1.71
CHD1-206ENST00000511067 SLC30A2Q9BRI3 323 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 RPP25Q9BUL9 199 aaKnown RBP4.36□□□□□ -1.71
CHD1-206ENST00000511067 COMMD4Q9H0A8 199 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 GPN2Q9H9Y4 310 aaPredicted RBP4.36□□□□□ -1.71
CHD1-206ENST00000511067 RDH8Q9NYR8 311 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 LAMP5Q9UJQ1 280 aa4.36□□□□□ -1.71
CHD1-206ENST00000511067 SDHDO14521 159 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 PPIHO43447 177 aaKnown RBP4.35□□□□□ -1.71
CHD1-206ENST00000511067 JAK2O60674 1132 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 PRAMEF12O95522 483 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 IGFBP1P08833 259 aaPredicted RBP4.35□□□□□ -1.71
CHD1-206ENST00000511067 TSPY4P0CV99 314 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 TSPY10P0CW01 314 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 HSPA5P11021 654 aaKnown RBP4.35□□□□□ -1.71
CHD1-206ENST00000511067 SDC1P18827 310 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 PSMA2P25787 234 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 CALRP27797 417 aaKnown RBP4.35□□□□□ -1.71
CHD1-206ENST00000511067 LINC01620Q4KN68 170 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 CCBE1Q6UXH8 406 aaPredicted RBP4.35□□□□□ -1.71
CHD1-206ENST00000511067 HIPK1Q86Z02 1210 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.35□□□□□ -1.71
CHD1-206ENST00000511067 SLC25A51Q9H1U9 297 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 TIGARQ9NQ88 270 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 EXOSC3Q9NQT5 275 aaKnown RBP4.35□□□□□ -1.71
CHD1-206ENST00000511067 CYTH4Q9UIA0 394 aa4.35□□□□□ -1.71
CHD1-206ENST00000511067 SF3B1O75533 1304 aaKnown RBP eCLIP4.35□□□□□ -1.712e-6■■■■■ 89.1
CHD1-206ENST00000511067 LCMT2O60294 686 aaKnown RBP4.34□□□□□ -1.71
CHD1-206ENST00000511067 VENTXO95231 258 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 JCHAINP01591 159 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 PIGRP01833 764 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 CSF2P04141 144 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 ASNSP08243 561 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 CT45A10P0DMU9 189 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 ANXA3P12429 323 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 KRT13P13646 458 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 ACADSP16219 412 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 CSRP3P50461 194 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 ARHGDIBP52566 201 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 HMGCS2P54868 508 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 ELP6Q0PNE2 266 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 LTB4RQ15722 352 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 ASPHD2Q6ICH7 369 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 SULT1C3Q6IMI6 304 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
CHD1-206ENST00000511067 PRSS48Q7RTY5 328 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 ANKRD37Q7Z713 158 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 MYPOPQ86VE0 399 aaPredicted RBP4.34□□□□□ -1.71
CHD1-206ENST00000511067 SERINC5Q86VE9 423 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 PARGQ86W56 976 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 TFB1MQ8WVM0 346 aaKnown RBP4.34□□□□□ -1.71
CHD1-206ENST00000511067 CASD1Q96PB1 797 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 NFKBIZQ9BYH8 718 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 OPN3Q9H1Y3 402 aaPredicted RBP4.34□□□□□ -1.71
CHD1-206ENST00000511067 ELOVL2Q9NXB9 296 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 TMOD2Q9NZR1 351 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 ARMCX1Q9P291 453 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 GMPPBQ9Y5P6 360 aa4.34□□□□□ -1.71
CHD1-206ENST00000511067 TRAV9-2A0A087WT02 112 aa4.33□□□□□ -1.72
CHD1-206ENST00000511067 PPIAL4CA0A0B4J2A2 164 aa4.33□□□□□ -1.72
CHD1-206ENST00000511067 ZNF840PA6NDX5 716 aa4.33□□□□□ -1.72
CHD1-206ENST00000511067 SRRM5B3KS81 715 aa4.33□□□□□ -1.72
CHD1-206ENST00000511067 CPLX1O14810 134 aa4.33□□□□□ -1.72
CHD1-206ENST00000511067 CASKO14936 926 aa4.33□□□□□ -1.72
CHD1-206ENST00000511067 PHF1O43189 567 aaPredicted RBP4.33□□□□□ -1.72
CHD1-206ENST00000511067 CRLF1O75462 422 aa4.33□□□□□ -1.72
CHD1-206ENST00000511067 PCCBP05166 539 aa4.33□□□□□ -1.72
CHD1-206ENST00000511067 PPIAL4GP0DN37 164 aa4.33□□□□□ -1.72
CHD1-206ENST00000511067 SOX6P35712 828 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms