RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 PINK1Q9BXM7 581 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 TMEM168Q9H0V1 697 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 ASCL3Q9NQ33 180 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 RASSF1Q9NS23 344 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 C5AR2Q9P296 337 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 ZNF624Q9P2J8 865 aaPredicted RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 APOBEC3BQ9UH17 382 aaKnown RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 ENPP5Q9UJA9 477 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 RNF6Q9Y252 685 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 ATG4BQ9Y4P1 393 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 PCDHGA6Q9Y5G7 932 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 TP53BP1Q12888 1972 aaPredicted RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 NOTCH2Q04721 2471 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 DOPEY2Q9Y3R5 2298 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 TLN1Q9Y490 2541 aaKnown RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 OR6C74A6NCV1 312 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 SYT5O00445 386 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 BTN3A3O00478 584 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 SCAMP1O15126 338 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 SOX30O94993 753 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ATE1O95260 518 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ITGB2P05107 769 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ALPPP05187 535 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 OSMP13725 252 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 CTSEP14091 401 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 UGT2B7P16662 529 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 GSTM3P21266 225 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 PCMT1P22061 227 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 PSMB9P28065 219 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 IDH2P48735 452 aaKnown RBP11.01□□□□□ -0.65
USF1-208ENST00000528768 DUSP3P51452 185 aaPredicted RBP11.01□□□□□ -0.65
USF1-208ENST00000528768 CRISP1P54107 249 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 OLR1P78380 273 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 TNFRSF17Q02223 184 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.01□□□□□ -0.65
USF1-208ENST00000528768 COX10Q12887 443 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 BNIP3Q12983 259 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 GANABQ14697 944 aaKnown RBP11.01□□□□□ -0.65
USF1-208ENST00000528768 CEBPEQ15744 281 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 MOGQ16653 247 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 DUSP7Q16829 419 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 RPS26P11Q5JNZ5 115 aaPredicted RBP11.01□□□□□ -0.65
USF1-208ENST00000528768 C6orf132Q5T0Z8 1188 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 SYT6Q5T7P8 510 aaPredicted RBP11.01□□□□□ -0.65
USF1-208ENST00000528768 DEF8Q6ZN54 512 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 LINC00299Q6ZSB3 139 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 C16orf62Q7Z3J2 963 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ABI3BPQ7Z7G0 1075 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ENTHD1Q8IYW4 607 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 LRRC25Q8N386 305 aaPredicted RBP11.01□□□□□ -0.65
USF1-208ENST00000528768 STX19Q8N4C7 294 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 AMER3Q8N944 861 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 FAM46DQ8NEK8 389 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 GPBAR1Q8TDU6 330 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ADAMTS15Q8TE58 950 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 FAR1Q8WVX9 515 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 DHRS1Q96LJ7 313 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ZFYVE21Q9BQ24 234 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 FUNDC2Q9BWH2 189 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ACTRT3Q9BYD9 372 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 LIN28AQ9H9Z2 209 aaKnown RBP11.01□□□□□ -0.65
USF1-208ENST00000528768 NMNAT1Q9HAN9 279 aaPredicted RBP11.01□□□□□ -0.65
USF1-208ENST00000528768 LYRM4Q9HD34 91 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 NECTIN3Q9NQS3 549 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 STARD5Q9NSY2 213 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 TBC1D23Q9NUY8 699 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 CES1P1Q9UKY3 287 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ZNF232Q9UNY5 417 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 PCDHGA10Q9Y5H3 936 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 KLK4Q9Y5K2 254 aa11.01□□□□□ -0.65
USF1-208ENST00000528768 ARID1BQ8NFD5 2236 aaPredicted RBP11□□□□□ -0.65
USF1-208ENST00000528768 A0A0J9YY10 115 aa11□□□□□ -0.65
USF1-208ENST00000528768 A0A1W2PPW3 197 aa11□□□□□ -0.65
USF1-208ENST00000528768 A6NCN8 305 aa11□□□□□ -0.65
USF1-208ENST00000528768 GLOD5A6NK44 160 aa11□□□□□ -0.65
USF1-208ENST00000528768 CLCA1A8K7I4 914 aa11□□□□□ -0.65
USF1-208ENST00000528768 C10orf142B7Z368 130 aa11□□□□□ -0.65
USF1-208ENST00000528768 M0R3G1 203 aa11□□□□□ -0.65
USF1-208ENST00000528768 PCDH17O14917 1159 aa11□□□□□ -0.65
USF1-208ENST00000528768 PGRMC2O15173 223 aa11□□□□□ -0.65
USF1-208ENST00000528768 SIGLEC6O43699 453 aa11□□□□□ -0.65
USF1-208ENST00000528768 OR10H3O60404 316 aa11□□□□□ -0.65
USF1-208ENST00000528768 CNOT3O75175 753 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 CSO75390 466 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 MT-ND2P03891 347 aa11□□□□□ -0.65
USF1-208ENST00000528768 HMGN2P05204 90 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 HTR1AP08908 422 aa11□□□□□ -0.65
USF1-208ENST00000528768 IFI6P09912 130 aa11□□□□□ -0.65
USF1-208ENST00000528768 ZNF888P0CJ79 500 aaPredicted RBP11□□□□□ -0.65
USF1-208ENST00000528768 ALPPL2P10696 532 aa11□□□□□ -0.65
USF1-208ENST00000528768 CKMT1AP12532 417 aa11□□□□□ -0.65
USF1-208ENST00000528768 POLR2CP19387 275 aaPredicted RBP11□□□□□ -0.65
USF1-208ENST00000528768 FEN1P39748 380 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 RAB15P59190 212 aa11□□□□□ -0.65
USF1-208ENST00000528768 SKP1P63208 163 aa11□□□□□ -0.65
USF1-208ENST00000528768 ALDH6A1Q02252 535 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 LASP1Q14847 261 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 SYPL1Q16563 259 aa11□□□□□ -0.65
USF1-208ENST00000528768 DGUOKQ16854 277 aa11□□□□□ -0.65
USF1-208ENST00000528768 NIPAL1Q6NVV3 410 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms