RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TRBV2A0A0J9YWF9 115 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 MEX3AA1L020 520 aaKnown RBP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 FADS2P1A8MWK0 482 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 B8ZZF3 427 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 GNGT2O14610 69 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 KCNAB3O43448 404 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 PRAMEF11O60813 436 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 FGF19O95750 216 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 IFNA14P01570 189 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 MT-ND1P03886 318 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 STAG3L2P0CL84 134 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 ITGAMP11215 1152 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 SPNP16150 400 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 FCARP24071 287 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 PSMB9P28065 219 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 LCN1P31025 176 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 GKP32189 559 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 NCS1P62166 190 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 RCAN2Q14206 197 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 TESK1Q15569 626 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 PARP15Q460N3 678 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 MARC1Q5VT66 337 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 LAIR2Q6ISS4 152 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 PARM1Q6UWI2 310 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 GDPD3Q7L5L3 318 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 CAMKMTQ7Z624 323 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 IQCHQ86VS3 1027 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 ADHFE1Q8IWW8 467 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 OR5K1Q8NHB7 308 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF596Q8TC21 504 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 FCGR1BQ92637 280 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 EGLN2Q96KS0 407 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 C3orf30Q96M34 536 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 CDCA3Q99618 268 aaPredicted RBP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 APOL4Q9BPW4 351 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 NXF2Q9GZY0 626 aaKnown RBP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 S1PR5Q9H228 398 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 RUBCNLQ9H714 662 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 FBXL17Q9UF56 701 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 HCN2Q9UL51 889 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 DNAJC15Q9Y5T4 150 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 PEX16Q9Y5Y5 336 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 VPS13AQ96RL7 3174 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 OR14I1A6ND48 311 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 OR52A4PA6NMU1 304 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 HEPACAM2A8MVW5 462 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 UBFD1O14562 309 aaKnown RBP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 AZIN1O14977 448 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 BNIP3LO60238 219 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 CST1P01037 141 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 HSMCR30P0CW71 290 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 C8orf89P0DMQ9 161 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 HGFP14210 728 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 NAGAP17050 411 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 DDX6P26196 483 aaKnown RBP eCLIP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 SOX18P35713 384 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 CLCN5P51795 746 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 IL5RAQ01344 420 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 GALK2Q01415 458 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 CTBP1Q13363 440 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 PTPRRQ15256 657 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 ZXDCQ2QGD7 858 aaPredicted RBP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 HKDC1Q2TB90 917 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 PYCR3Q53H96 274 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 TPRG1LQ5T0D9 272 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 CCNJQ5T5M9 372 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 RALGPS2Q86X27 583 aaPredicted RBP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 EID3Q8N140 333 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 OR56A3Q8NH54 315 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 TWIST2Q8WVJ9 160 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 SMARCD2Q92925 531 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 IRF7Q92985 503 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 DPH2Q9BQC3 489 aaPredicted RBP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 CCDC32Q9BV29 185 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 ALOXE3Q9BYJ1 711 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 TM6SF2Q9BZW4 377 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 GLOD4Q9HC38 313 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 SPHK2Q9NRA0 654 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 PTGFRNQ9P2B2 879 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 ERVK-18Q9QC07 812 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 WNT16Q9UBV4 365 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 KCNN3Q9UGI6 736 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 ERVW-1Q9UQF0 538 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 AAR2Q9Y312 384 aaKnown RBP8.84□□□□□ -0.99
SNHG3-201ENST00000413987 OR51B4Q9Y5P0 310 aa8.84□□□□□ -0.99
SNHG3-201ENST00000413987 A0A1W2PQ67 120 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 C1QTNF9BB2RNN3 333 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 H3BM21 787 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 SCDO00767 359 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 BCKDKO14874 412 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 GALR2O43603 387 aaPredicted RBP8.83□□□□□ -1
SNHG3-201ENST00000413987 RGS10O43665 173 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 SSX5O60225 188 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 SERPINI2O75830 405 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 PRLP01236 227 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 F3P13726 295 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 RPA2P15927 270 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 CD36P16671 472 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 CEBPDP49716 269 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms