RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 NEDD4LQ96PU5 975 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SNX18Q96RF0 628 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SLX1AQ9BQ83 275 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SOSTQ9BQB4 213 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SPATA5L1Q9BVQ7 753 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 FNDC11Q9BVV2 318 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PINK1Q9BXM7 581 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 OR2B2Q9GZK3 357 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NEK6Q9HC98 313 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 EXOSC4Q9NPD3 245 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC35C2Q9NQQ7 365 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SNTG1Q9NSN8 517 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TVP23BQ9NYZ1 205 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CCDC88CQ9P219 2028 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC9A8Q9Y2E8 581 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PRKAB1Q9Y478 270 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 A0A087WUU8 490 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 A0A1W2PQ09 198 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 HMX3A6NHT5 357 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PRR19A6NJB7 356 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 METTL12A8MUP2 240 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 GPR89AB7ZAQ6 455 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM47E-STBD1D6RA91 191 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 AP3D1O14617 1153 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 MYL12BO14950 172 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PRODHO43272 600 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 EFSO43281 561 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 OR1F1O43749 312 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PRICKLE3O43900 615 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CDRT1O95170 752 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 HLA-DQB1P01920 261 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 FGBP02675 491 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 EPHX1P07099 455 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 GPR89BP0CG08 455 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ACRP10323 421 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NR2F1P10589 423 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 EPCAMP16422 314 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 S100A1P23297 94 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PSMB5P28074 263 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TEAD1P28347 426 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PPP2R1BP30154 601 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 FGF9P31371 208 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 RCVRNP35243 200 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 P2RY2P41231 377 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC6A11P48066 632 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC9A3P48764 834 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TGM4P49221 684 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SMSP52788 366 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NKX2-5P52952 324 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 WNT4P56705 351 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TAS2R38P59533 333 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CDK3Q00526 305 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 RUNX1T1Q06455 604 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PRDX1Q06830 199 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 FOXD4Q12950 439 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CCINQ13939 588 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 GNA13Q14344 377 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CEBPEQ15744 281 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 MINDY4Q4G0A6 757 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 FNDC3BQ53EP0 1204 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF628Q5EBL2 1059 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ZMAT1Q5H9K5 638 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ATAT1Q5SQI0 421 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ATAD3CQ5T2N8 411 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PIP5KL1Q5T9C9 394 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NDUFAF5Q5TEU4 345 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM46CQ5VWP2 391 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 LIPKQ5VXJ0 399 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF517Q6ZMY9 492 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF793Q6ZN11 406 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 QSOX2Q6ZRP7 698 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 USP30Q70CQ3 517 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 GRASPQ7Z6J2 395 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 IQCHQ86VS3 1027 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 RAB43Q86YS6 212 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 RDH10Q8IZV5 341 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 OR8H2Q8N162 312 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CACTIN-AS1Q8N1I8 211 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 GDPD1Q8N9F7 314 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TTLQ8NG68 377 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 OR5D16Q8NGK9 328 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 OR2A1Q8NGT9 310 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SUN3Q8TAQ9 357 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM163Q8TC26 289 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SPPL3Q8TCT6 385 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 GNPDA2Q8TDQ7 276 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CXorf40AQ8TE69 158 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 XAGE5Q8WWM1 108 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TM9SF4Q92544 642 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 MOAP1Q96BY2 351 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF707Q96C28 371 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 LRR1Q96L50 414 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CAMK1GQ96NX5 476 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NELL2Q99435 816 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ARHGDIGQ99819 225 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SARGQ9BW04 601 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TEX101Q9BY14 249 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PLA2G12AQ9BZM1 189 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TP63Q9H3D4 680 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ANKRD19PQ9H560 264 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms