RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 RRAGDQ9NQL2 400 aaPredicted RBP16.29■□□□□ 0.2
ITGB1-215ENST00000488494 SLC35C2Q9NQQ7 365 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 SENP1Q9P0U3 644 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 PRODH2Q9UF12 536 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 FBN2P35556 2912 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 TRGV5A0A0B4J1U4 118 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 A0A1B0GVC2 190 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 AQP7O14520 342 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 BCKDKO14874 412 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 HNRNPRO43390 633 aaKnown RBP16.28■□□□□ 0.2
ITGB1-215ENST00000488494 TRIM13O60858 407 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 TRIM3O75382 744 aaPredicted RBP16.28■□□□□ 0.2
ITGB1-215ENST00000488494 PPM1BO75688 479 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 DDCP20711 480 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 ENDOUP21128 410 aaKnown RBP16.28■□□□□ 0.2
ITGB1-215ENST00000488494 GDF1P27539 372 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 ALDH3A1P30838 453 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 MAN2A2P49641 1150 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 EMDP50402 254 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 RPP38P78345 283 aaKnown RBP16.28■□□□□ 0.2
ITGB1-215ENST00000488494 SLC10A1Q14973 349 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 ERCC6LQ2NKX8 1250 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 SP5Q6BEB4 398 aaPredicted RBP16.28■□□□□ 0.2
ITGB1-215ENST00000488494 TICAM1Q8IUC6 712 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 SDCCAG3Q96C92 435 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 OMA1Q96E52 524 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 LCORQ96JN0 433 aaPredicted RBP16.28■□□□□ 0.2
ITGB1-215ENST00000488494 SECISBP2Q96T21 854 aaKnown RBP16.28■□□□□ 0.2
ITGB1-215ENST00000488494 TRMOQ9BU70 441 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 CCL27Q9Y4X3 112 aa16.28■□□□□ 0.2
ITGB1-215ENST00000488494 ANKRD33BA6NCL7 494 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 FRG2CA6NGY1 282 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 AZIN1O14977 448 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 ACOX3O15254 700 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 SUSD5O60279 629 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 HCN1O60741 890 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 NME6O75414 186 aaPredicted RBP16.27■□□□□ 0.2
ITGB1-215ENST00000488494 CLDN14O95500 239 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 CHRNGP07510 517 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 ABCB1P08183 1280 aaPredicted RBP16.27■□□□□ 0.2
ITGB1-215ENST00000488494 MASP1P48740 699 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 C2orf80Q0P641 193 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 KANK2Q63ZY3 851 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 FAM71E1Q6IPT2 247 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 NOXRED1Q6NXP6 359 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 FAM76AQ8TAV0 307 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 ERP27Q96DN0 273 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 BBS4Q96RK4 519 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 ROPN1BQ9BZX4 212 aaPredicted RBP16.27■□□□□ 0.2
ITGB1-215ENST00000488494 METTL7AQ9H8H3 244 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 ROPN1Q9HAT0 212 aaPredicted RBP16.27■□□□□ 0.2
ITGB1-215ENST00000488494 CHST11Q9NPF2 352 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 SPRR3Q9UBC9 169 aa16.27■□□□□ 0.2
ITGB1-215ENST00000488494 ZNF407Q9C0G0 2248 aa16.27■□□□□ 0.19
ITGB1-215ENST00000488494 DCHS2Q6V1P9 2916 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 NCKAP5O14513 1909 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 FIGNL2A6NMB9 653 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 TMEM233B4DJY2 109 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 SLC28A1O00337 649 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 RGS14O43566 566 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 SEC22BO75396 215 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 CHEK2O96017 543 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 JUNP05412 331 aaKnown RBP16.26■□□□□ 0.19
ITGB1-215ENST00000488494 NTSP30990 170 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 CASP3P42574 277 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 PPICP45877 212 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 TRPC1P48995 793 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 NCBP2P52298 156 aaKnown RBP eCLIP16.26■□□□□ 0.192e-8■■■■■ 39
ITGB1-215ENST00000488494 CORO7P57737 925 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 DCAF7P61962 342 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 ZNF155Q12901 538 aaPredicted RBP16.26■□□□□ 0.19
ITGB1-215ENST00000488494 CEBPEQ15744 281 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 PRSS53Q2L4Q9 553 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 GXYLT1Q4G148 440 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 TMEM198Q66K66 360 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 DESI1Q6ICB0 168 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 ZNF585AQ6P3V2 769 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 ZCCHC23Q6ZST2 131 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 IKBIPQ70UQ0 350 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 MREGQ8N565 214 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 OR7G2Q8NG99 324 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 OR2T11Q8NH01 316 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.26■□□□□ 0.19
ITGB1-215ENST00000488494 TCP10LQ8TDR4 215 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 CA5BP1Q8WTZ4 195 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 HGDQ93099 445 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 HSPBAP1Q96EW2 488 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 BTBD9Q96Q07 612 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 ANGPTL4Q9BY76 406 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 TUBB1Q9H4B7 451 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 LRTM1Q9HBL6 345 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 C1orf109Q9NX04 203 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 QPCTLQ9NXS2 382 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 COQ3Q9NZJ6 369 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 ACAD8Q9UKU7 415 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 C15orf41Q9Y2V0 281 aa16.26■□□□□ 0.19
ITGB1-215ENST00000488494 GTF3C1Q12789 2109 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 APCP25054 2843 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 C19orf84I3L1E1 186 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 BCAS2O75934 225 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms