RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CTSVO60911 334 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 IGFBP1P08833 259 aaPredicted RBP20.24■□□□□ 0.83
CLN6-224ENST00000638076 HNRNPCL4P0DMR1 293 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 LIPAP38571 399 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 BUD31P41223 144 aaPredicted RBP20.24■□□□□ 0.83
CLN6-224ENST00000638076 UGT2B15P54855 530 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 NCS1P62166 190 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 YPEL5P62699 121 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 ST3GAL4Q11206 333 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 LTB4RQ15722 352 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 PGBD2Q6P3X8 592 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 FAM92BQ6ZTR7 304 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 TRIM48Q8IWZ4 208 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 B3GNT7Q8NFL0 401 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 OR6T1Q8NGN1 323 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 FNDC8Q8TC99 324 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 HMGB4Q8WW32 186 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 RPL3LQ92901 407 aaKnown RBP20.24■□□□□ 0.83
CLN6-224ENST00000638076 OR2A5Q96R48 311 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 KLHL25Q9H0H3 589 aa20.24■□□□□ 0.83
CLN6-224ENST00000638076 P2RX6O15547 441 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 MPZL2O60487 215 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 LGI1O95970 557 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 COL4A2P08572 1712 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 TARDBPQ13148 414 aaKnown RBP eCLIP20.23■□□□□ 0.832e-43■■■■■ 32.4
CLN6-224ENST00000638076 ILKQ13418 452 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 FAM46DQ8NEK8 389 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 TM4SF19Q96DZ7 209 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 C10orf90Q96M02 699 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 GDF15Q99988 308 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 FNDC11Q9BVV2 318 aa20.23■□□□□ 0.83
CLN6-224ENST00000638076 OR6C74A6NCV1 312 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 CLDN24A6NM45 220 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 M0R082 166 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 NME6O75414 186 aaPredicted RBP20.22■□□□□ 0.83
CLN6-224ENST00000638076 FCRL6Q6DN72 434 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 PATE1Q8WXA2 126 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 SLC38A4Q969I6 547 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 C6orf106Q9H6K1 298 aaPredicted RBP20.22■□□□□ 0.83
CLN6-224ENST00000638076 ACTR10Q9NZ32 417 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 SCN3AQ9NY46 2000 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 A0A1W2PRQ8 180 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 H3BN98 237 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 J3QRK9 145 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 TNFSF14O43557 240 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 SEMA4FO95754 770 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 CPN2P22792 545 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 ILF3Q12906 894 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLN6-224ENST00000638076 COL9A2Q14055 689 aaPredicted RBP20.22■□□□□ 0.83
CLN6-224ENST00000638076 TIGD6Q17RP2 521 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 DEFB134Q4QY38 66 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 PODNL1Q6PEZ8 512 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 FIGLAQ6QHK4 219 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 FLCNQ8NFG4 579 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 ZNF675Q8TD23 568 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 KLHL6Q8WZ60 621 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 LGALS12Q96DT0 336 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 PLEKHA8Q96JA3 519 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 POLR2J3Q9H1A7 115 aaKnown RBP20.22■□□□□ 0.83
CLN6-224ENST00000638076 MMP17Q9ULZ9 603 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 CORINQ9Y5Q5 1042 aa20.22■□□□□ 0.83
CLN6-224ENST00000638076 SH3D21A4FU49 640 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 TLR4O00206 839 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 TOR1BO14657 336 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 MAN2A2P49641 1150 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 TNFRSF17Q02223 184 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 TMED1Q13445 227 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 SUZ12Q15022 739 aaKnown RBP20.21■□□□□ 0.83
CLN6-224ENST00000638076 SLC44A3Q8N4M1 653 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 OR13H1Q8NG92 308 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 COL26A1Q96A83 441 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 IL4I1Q96RQ9 567 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 PINK1Q9BXM7 581 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 CTPS2Q9NRF8 586 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 DNAAF2Q9NVR5 837 aaKnown RBP20.21■□□□□ 0.83
CLN6-224ENST00000638076 CLN6Q9NWW5 311 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 C2CD4DB7Z1M9 353 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 CASC3O15234 703 aaKnown RBP20.21■□□□□ 0.83
CLN6-224ENST00000638076 ADORA3P0DMS8 318 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 OPRL1P41146 370 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 XKP51811 444 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 C16orf87Q6PH81 154 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 WDR53Q7Z5U6 358 aaPredicted RBP20.21■□□□□ 0.83
CLN6-224ENST00000638076 TRUB1Q8WWH5 349 aaKnown RBP20.21■□□□□ 0.83
CLN6-224ENST00000638076 GIMAP5Q96F15 307 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 TWSG1Q9GZX9 223 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 MAN2C1Q9NTJ4 1040 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 KCMF1Q9P0J7 381 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 ANKMY1Q9P2S6 941 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 HS3ST3A1Q9Y663 406 aa20.21■□□□□ 0.83
CLN6-224ENST00000638076 SMIM10L1P0DMW3 83 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 TGFBR1P36897 503 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 CHRNEQ04844 493 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 DGUOKQ16854 277 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 PRAMEF8Q5VWM4 474 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 PRAMEF7Q5VXH5 474 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 SLC22A18ASQ8N1D0 253 aa20.2■□□□□ 0.82
CLN6-224ENST00000638076 LRRC25Q8N386 305 aaPredicted RBP20.2■□□□□ 0.82
CLN6-224ENST00000638076 DYNC2LI1Q8TCX1 351 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms