RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 TEX9Q8N6V9 391 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 SIMC1Q8NDZ2 872 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 WNT2BQ93097 391 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 ZFP3Q96NJ6 502 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 WFIKKN1Q96NZ8 548 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 GPR22Q99680 433 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 G6PC3Q9BUM1 346 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 BDH2Q9BUT1 245 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 PIGMQ9H3S5 423 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 DDX31Q9H8H2 851 aaKnown RBP13.24□□□□□ -0.29
VAMP1-203ENST00000400911 WDR41Q9HAD4 459 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 GALNT9Q9HCQ5 603 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 SERHLQ9NQF3 203 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 NUDT4Q9NZJ9 180 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 TXNDC16Q9P2K2 825 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 MAPRE3Q9UPY8 281 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 PCDHGA11Q9Y5H2 935 aa13.24□□□□□ -0.29
VAMP1-203ENST00000400911 INAFM1C9JVW0 142 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 CDH16O75309 829 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 PPM1BO75688 479 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 PIK3R1P27986 724 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 SSTR1P30872 391 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 GCKP35557 465 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 CPOXP36551 454 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 STARP49675 285 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 ARFIP1P53367 373 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 FAM27E3Q08E93 113 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 DLG1Q12959 904 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 GAB1Q13480 694 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 NNATQ16517 81 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 ACKR1Q16570 336 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 PRSS57Q6UWY2 283 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 ADGRE4PQ86SQ3 457 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 C17orf47Q8NEP4 570 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 OR14L1PQ8NHC6 308 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 RDH11Q8TC12 318 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 UBTD2Q8WUN7 234 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 PERPQ96FX8 193 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 UCN2Q96RP3 112 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 NODALQ96S42 347 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 RBBP8Q99708 897 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 CPNE1Q99829 537 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 NXF5Q9H1B4 397 aaKnown RBP13.23□□□□□ -0.29
VAMP1-203ENST00000400911 UBTD1Q9HAC8 227 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 PACSIN3Q9UKS6 424 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 DTX4Q9Y2E6 619 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 ANGPTL3Q9Y5C1 460 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 EML6Q6ZMW3 1958 aa13.23□□□□□ -0.29
VAMP1-203ENST00000400911 ANK3Q12955 4377 aaKnown RBP13.22□□□□□ -0.29
VAMP1-203ENST00000400911 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 DEFB108AA8MXU0 73 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 SNPHO15079 494 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 CTIFO43310 598 aaKnown RBP13.22□□□□□ -0.29
VAMP1-203ENST00000400911 KERAO60938 352 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 TNFSF13O75888 250 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 S1PR1P21453 382 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 NT5EP21589 574 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 GPX3P22352 226 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 PTGDSP41222 190 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 XKP51811 444 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 NEK2P51955 445 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 DIO3P55073 304 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 PHEXP78562 749 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 CPSF6Q16630 551 aaKnown RBP eCLIP13.22□□□□□ -0.29
VAMP1-203ENST00000400911 KBTBD12Q3ZCT8 623 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 LIPJQ5W064 366 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 OR52E8Q6IFG1 317 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 SLC30A6Q6NXT4 461 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 ENPP6Q6UWR7 440 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 RAPH1Q70E73 1250 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 CXXC5Q7LFL8 322 aaKnown RBP13.22□□□□□ -0.29
VAMP1-203ENST00000400911 NUP54Q7Z3B4 507 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 WDSUB1Q8N9V3 476 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 OR7G1Q8NGA0 311 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 OR4K14Q8NGD5 310 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 SPATA3Q8NHX4 192 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 PYROXD1Q8WU10 500 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 CDKL2Q92772 493 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 HGDQ93099 445 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 PIK3IP1Q96FE7 263 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 ATOH8Q96SQ7 321 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 CCL19Q99731 98 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 REPIN1Q9BWE0 567 aaKnown RBP13.22□□□□□ -0.29
VAMP1-203ENST00000400911 OSBPL11Q9BXB4 747 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 ACTR8Q9H981 624 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 NMRAL1Q9HBL8 299 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 KLHL28Q9NXS3 571 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 EHD3Q9NZN3 535 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 CLCF1Q9UBD9 225 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 EXO1Q9UQ84 846 aaKnown RBP13.22□□□□□ -0.29
VAMP1-203ENST00000400911 TSC22D4Q9Y3Q8 395 aa13.22□□□□□ -0.29
VAMP1-203ENST00000400911 NCKAP5O14513 1909 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 H0YIV9 168 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 PLOD2O00469 737 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 CBR3O75828 277 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 SMNDC1O75940 238 aaKnown RBP eCLIP13.21□□□□□ -0.29
VAMP1-203ENST00000400911 TGM6O95932 706 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 NAGAP17050 411 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 CNTFP26441 200 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 GP5P40197 560 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms