RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 GABRB1P18505 474 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 ACP1P24666 158 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 ACAT1P24752 427 aaKnown RBP4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 PSMA3P25788 255 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 ACADVLP49748 655 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 CDH8P55286 799 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 UBASH3AP57075 661 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 POLR2FP61218 127 aaKnown RBP4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 MPP1Q00013 466 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 TAF10Q12962 218 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 DNAJC3Q13217 504 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 NUMA1Q14980 2115 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 RASA2Q15283 850 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 CLPPQ16740 277 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 FUT11Q495W5 492 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 SNX30Q5VWJ9 437 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 ARHGAP22Q7Z5H3 698 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 TMEM25Q86YD3 366 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 NUP93Q8N1F7 819 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 WDTC1Q8N5D0 677 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 CPSF7Q8N684 471 aaKnown RBP4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 EID2Q8N6I1 236 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 LRRC52Q8N7C0 313 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 SYT2Q8N9I0 419 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 KBTBD8Q8NFY9 601 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 OR2T11Q8NH01 316 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 HPSE2Q8WWQ2 592 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 ATP6V1E2Q96A05 226 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 MTERF3Q96E29 417 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 PGAM5Q96HS1 289 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 SRSF8Q9BRL6 282 aaKnown RBP4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 BBS2Q9BXC9 721 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 ITPAQ9BY32 194 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 LAT2Q9GZY6 243 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 SYNCQ9H7C4 482 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 SGK2Q9HBY8 427 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 TM9SF3Q9HD45 589 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 OLA1Q9NTK5 396 aaKnown RBP4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 GDAP2Q9NXN4 497 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 CLIC5Q9NZA1 410 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 LSM7Q9UK45 103 aaKnown RBP4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 NCKAP1Q9Y2A7 1128 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 BSNQ9UPA5 3926 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 NOTCH2Q04721 2471 aa4.17□□□□□ -1.74
HMGB3P5-201ENST00000428894 CACNA1DQ01668 2161 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 C2orf81A6NN90 581 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 WASH3PC4AMC7 463 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 J3KRW8 73 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 KIF2AO00139 706 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 PDLIM1O00151 329 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 TO15178 435 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 COCHO43405 550 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 FAM189A1O60320 539 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 PFKFB2O60825 505 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 ATP6V1G1O75348 118 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 STAMBPO95630 424 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 SEMA4FO95754 770 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 DNTTP04053 509 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 CISD3P0C7P0 127 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 EFNA1P20827 205 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 RBMS1P29558 406 aaKnown RBP4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 S100A5P33763 92 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 RXRGP48443 463 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 ACOT2P49753 483 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 RBP5P82980 135 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 TFAMQ00059 246 aaKnown RBP4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 MAMLD1Q13495 774 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 ENPP2Q13822 863 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 DLG2Q15700 870 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 INAQ16352 499 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 IRGCQ6NXR0 463 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 KDM7AQ6ZMT4 941 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 TPGS1Q6ZTW0 290 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 CHST9Q7L1S5 443 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 MFN1Q8IWA4 741 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 BBS7Q8IWZ6 715 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 ADGRF2Q8IZF7 708 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 SLC7A5P1Q8MH63 180 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 SPAG16Q8N0X2 631 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 CSGALNACT2Q8N6G5 542 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 OR2T3Q8NH03 318 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 CCDC110Q8TBZ0 833 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 SAP25Q8TEE9 199 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 FBXO32Q969P5 355 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 BIRC7Q96CA5 298 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 PKMYT1Q99640 499 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 FGFBP2Q9BYJ0 223 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 ELOVL4Q9GZR5 314 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 ABCG4Q9H172 646 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 P2RY12Q9H244 342 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 RPS10P5Q9NQ39 176 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 GDF3Q9NR23 364 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 STARD5Q9NSY2 213 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 PDRG1Q9NUG6 133 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 THAP10Q9P2Z0 257 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 CHORDC1Q9UHD1 332 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 ITGA11Q9UKX5 1188 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 SCML1Q9UN30 329 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 PLA2G4CQ9UP65 541 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 ZNF510Q9Y2H8 683 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms