RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GPRC5BQ9NZH0 403 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 CDC42EP3Q9UKI2 254 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 ABCA1O95477 2261 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 USF3Q68DE3 2245 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 A0A087X1B8 175 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 C2orf92A0A1B0GVN3 265 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 LRRC14BA6NHZ5 514 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 TBX6O95947 436 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-220ENST00000551716 POU2F1P14859 743 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 ALOX15P16050 662 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-220ENST00000551716 ATP5A1P25705 553 aaKnown RBP13.89□□□□□ -0.19
CACNB3-220ENST00000551716 PTPN6P29350 595 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 TLX1P31314 330 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-220ENST00000551716 THBS2P35442 1172 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 SOX18P35713 384 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 SLC37A1P57057 533 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 FBXW4P57775 412 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 SRYQ05066 204 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 EBPQ15125 230 aaKnown RBP13.89□□□□□ -0.19
CACNB3-220ENST00000551716 SPRED3Q2MJR0 410 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 AP5B1Q2VPB7 878 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 TMEM35AQ53FP2 167 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 BEX5Q5H9J7 111 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 HLA-DQA1Q5Y7H0 255 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 GRAMD2AQ8IUY3 354 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 ZNF611Q8N823 705 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 RIT1Q92963 219 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 REPS1Q96D71 796 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 STARD4Q96DR4 205 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 VPS39Q96JC1 886 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 F2RL3Q96RI0 385 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 EGFL8Q99944 293 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
CACNB3-220ENST00000551716 CLCF1Q9UBD9 225 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 MAPRE3Q9UPY8 281 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 DLGAP4Q9Y2H0 992 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 VWA7Q9Y334 891 aa13.89□□□□□ -0.19
CACNB3-220ENST00000551716 NCKAP5O14513 1909 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 HRKO00198 91 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 FGF17O60258 216 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 CBR3O75828 277 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 WDR47O94967 919 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 CCDC175P0C221 793 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 PPP3CBP16298 524 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 LOXP28300 417 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-220ENST00000551716 GALNSP34059 522 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 KCNJ5P48544 419 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 NR1H2P55055 460 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 HERVK_113P63132 956 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 ERVK-8P63133 956 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 FGFBP1Q14512 234 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 ZNF267Q14586 743 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-220ENST00000551716 PPP1R3AQ16821 1122 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 RBM20Q5T481 1227 aaKnown RBP13.88□□□□□ -0.19
CACNB3-220ENST00000551716 C10orf62Q5T681 223 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-220ENST00000551716 AAGABQ6PD74 315 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 TRIM42Q8IWZ5 723 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 OR4N5Q8IXE1 308 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 MAPK1IP1LQ8NDC0 245 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 ZBED6CLQ96FA7 236 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-220ENST00000551716 PGM2Q96G03 612 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 ERVK-6Q9BXR3 956 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 CORO1CQ9ULV4 474 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-220ENST00000551716 RNF112Q9ULX5 631 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 ERVK-19Q9WJR5 959 aa13.88□□□□□ -0.19
CACNB3-220ENST00000551716 ROS1P08922 2347 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 GNB5O14775 395 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 CLGNO14967 610 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 OR10H2O60403 315 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 SCELO95171 688 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 AHSGP02765 367 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 RHOXF2BP0C7M4 288 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 KRT15P19012 456 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 HIST1H1TP22492 207 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-220ENST00000551716 GABRB3P28472 473 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 GMPRP36959 345 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 SLC6A12P48065 614 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 TERF1P54274 439 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 FUT7Q11130 342 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 LAPTM5Q13571 262 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 HIST2H2ACQ16777 129 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-220ENST00000551716 PAGE2BQ5JRK9 111 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 BICRALQ6AI39 1079 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 HIST2H2AA3Q6FI13 130 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 SLC30A6Q6NXT4 461 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 ZNF474Q6S9Z5 364 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-220ENST00000551716 ANGPTL8Q6UXH0 198 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 ZNF704Q6ZNC4 412 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-220ENST00000551716 CHMP1BQ7LBR1 199 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 P4HA3Q7Z4N8 544 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 VN1R5Q7Z5H4 357 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 GALNT7Q86SF2 657 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 RNF10Q8N5U6 811 aaKnown RBP13.87□□□□□ -0.19
CACNB3-220ENST00000551716 CNEP1R1Q8N9A8 125 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 OR14L1PQ8NHC6 308 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 ZC3HAV1LQ96H79 300 aaKnown RBP13.87□□□□□ -0.19
CACNB3-220ENST00000551716 PHACTR1Q9C0D0 580 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 ZNF490Q9ULM2 529 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-220ENST00000551716 FREM3P0C091 2139 aa13.87□□□□□ -0.19
CACNB3-220ENST00000551716 CUBNO60494 3623 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms