RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GPR141Q7Z602 305 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 LRTM2Q8N967 370 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 CCDC148Q8NFR7 591 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 CKAP2Q8WWK9 683 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 CCDC51Q96ER9 411 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 JPH2Q9BR39 696 aaPredicted RBP4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 NFKBIZQ9BYH8 718 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 MMP28Q9H239 520 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 RNF121Q9H920 327 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 RNPEPL1Q9HAU8 725 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 POLD4Q9HCU8 107 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 ZNF334Q9HCZ1 680 aaPredicted RBP4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 INTS9Q9NV88 658 aaKnown RBP4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 TRPC4Q9UBN4 977 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 KCNG2Q9UJ96 466 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 NDRG2Q9UN36 371 aaKnown RBP4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 SF3B1O75533 1304 aaKnown RBP eCLIP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 DENND4AQ7Z401 1863 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 CNOT1A5YKK6 2376 aaKnown RBP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 MYH6P13533 1939 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 TRAV18A0A075B6X5 111 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 TRBV5-5A0A0J9YX44 114 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 KERAO60938 352 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 RAD51DO75771 328 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 AKAP3O75969 853 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 ERLIN2O94905 339 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 CTDNEP1O95476 244 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 RETP07949 1114 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 VCLP18206 1134 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 HLA-DPA1P20036 260 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 ITGA3P26006 1051 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 ATP6V1E1P36543 226 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 CETN2P41208 172 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 MAGEA9P43362 315 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 MAGEB1P43366 347 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 BRCC3P46736 316 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 GLIPR1P48060 266 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 KIAA1024LP59773 190 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 CDR2Q01850 454 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 AKAP17AQ02040 695 aaKnown RBP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 MXD4Q14582 209 aaPredicted RBP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 SF3A2Q15428 464 aaKnown RBP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 UPP1Q16831 310 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 PDLIM3Q53GG5 364 aaPredicted RBP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 XKR6Q5GH73 641 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 LIN9Q5TKA1 542 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 SLC8B1Q6J4K2 584 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 VITQ6UXI7 678 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 ALKAL1Q6UXT8 129 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 Q6ZS52 159 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 SLC16A9Q7RTY1 509 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 KIRREL3Q8IZU9 778 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 SFRP1Q8N474 314 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 C9orf106Q8NAJ2 232 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 LPCAT1Q8NF37 534 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 OR4C3Q8NH37 302 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 TCP11Q8WWU5 503 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 METTL21AQ8WXB1 218 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 PIK3R3Q92569 461 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 BCL2L2Q92843 193 aaPredicted RBP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 SNX21Q969T3 373 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 ELSPBP1Q96BH3 223 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 AP2M1Q96CW1 435 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 CDKN2AIPNLQ96HQ2 116 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 RBM41Q96IZ5 413 aaKnown RBP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 TSSK2Q96PF2 358 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 PANX3Q96QZ0 392 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 ZNF559Q9BR84 538 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 POLR3FQ9H1D9 316 aaPredicted RBP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 UBQLN3Q9H347 655 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 ITM2BQ9Y287 266 aa4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 DSPP15924 2871 aaKnown RBP4.98□□□□□ -1.61
RNU4-39P-201ENST00000362455 LOXHD1Q8IVV2 1947 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 AKAP13Q12802 2813 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 ITPR1Q14643 2758 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 PKD1L2Q7Z442 2459 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 SMIM1B2RUZ4 78 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 NPIPA3F8WFD2 350 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 H0YIG0 161 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 LMX1BO60663 402 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 GLRA3O75311 464 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 SLC22A3O75751 556 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 B3GAT3O94766 335 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 DEXIO95424 95 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 PNPP00491 289 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 ATP1B1P05026 303 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 GPIP06744 558 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 PRSS1P07477 247 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 CD59P13987 128 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 CCNE1P24864 410 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 CXCL12P48061 93 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 LINC01547P58512 204 aaPredicted RBP4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 RBM39Q14498 530 aaKnown RBP4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 RPS6KA1Q15418 735 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 CCDC6Q16204 474 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 SGCBQ16585 318 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 AARDQ4LEZ3 155 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 XKR4Q5GH76 650 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 STPG1Q5TH74 334 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 LCN1P1Q5VSP4 162 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms