RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Memo1Q91VH6 297 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Arrb2Q91YI4 410 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Golga1Q9CW79 758 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Uba7Q9DBK7 977 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Tsc1Q9EP53 1161 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Aif1lQ9EQX4 150 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Il36aQ9JLA2 160 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Rnf4Q9QZS2 194 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Atp6v1c1Q9Z1G3 382 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 B4galt2Q9Z2Y2 369 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Celsr2Q9R0M0 2920 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Usp9yF8VPU6 2556 aa10.1□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Igkv19-93A0A0G2JFZ3 115 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 UprtB1AVZ0 310 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Wdr25E9Q349 535 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Casp6O08738 276 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Dync1i2O88487 612 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 SnrpnP63163 240 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Elavl1P70372 326 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Cpne9Q1RLL3 553 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Gm10488Q4KL05 212 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Slc10a7Q5PT53 340 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Ccdc92bQ5SUE3 299 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Foxd3Q61060 465 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Six1Q62231 284 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 HltfQ6PCN7 1003 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Pomgnt2Q8BW41 605 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Znf385bQ8BXJ8 482 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 CrhQ8CIT0 187 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Olfr352Q8VGJ9 315 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Asb8Q91ZT9 288 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Sfxn2Q925N2 322 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Mccc1Q99MR8 717 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Trim16Q99PP9 556 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Psma8Q9CWH6 250 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Ilf2Q9CXY6 390 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Pip4p2Q9CZX7 257 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Tssk3Q9D2E1 268 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Pbld1Q9DCG6 288 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Tacc3Q9JJ11 631 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Ddx39bQ9Z1N5 428 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Slc25a53A2AF28 346 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Samt3A2ARK7 233 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Mmrn1B2RPV6 1210 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Gm8237E9Q257 205 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Coq10aE9Q3H6 259 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Mfsd4b4J3QNS5 503 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Gm3629K7N6Y2 205 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Fen1P39749 378 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 InaP46660 501 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Fdft1P53798 416 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Fam207aP58468 219 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Il11ra2P70225 432 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Frg1P97376 258 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Hbq1bQ3U0A6 142 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Ag2Q3UPL5 249 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Taok1Q5F2E8 1001 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 ArhgdigQ62160 225 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Il11ra1Q64385 432 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 CebpeQ6PZD9 281 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Plppr5Q8BJ52 321 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Prps1l1Q8C5R8 318 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Zfp62Q8C827 914 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 PygbQ8CI94 843 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Mill1Q8HWE7 395 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 TfQ921I1 697 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Snf8Q9CZ28 258 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Tmem174Q9DCX7 243 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Cpb2Q9JHH6 422 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Nt5cQ9JM14 200 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Actl7aQ9QY84 440 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 Dyrk1bQ9Z188 629 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 MycsQ9Z304 431 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 9930021J03RikH3BKP8 2027 aa10.09□□□□□ -0.79
Ccdc60-202ENSMUST00000086483 6430628N08RikA0A0U1RQ45 177 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Olfr271-ps1A0A1L1SQH2 283 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Fam166bA2AIP0 273 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Otud3B1AZ99 396 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Gm3149E9PW52 257 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Gm21103E9Q2Q1 267 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 5430401F13RikE9Q328 175 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Vmn2r35E9Q7U8 861 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 4930451I11RikE9Q9R3 111 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 SmgcF6VRN1 385 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Gm3476K7N6V0 257 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Gm8362K7N6Y6 257 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Hps1O08983 704 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Ctnnd2O35927 1247 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Cldn1O88551 211 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Abcd4O89016 606 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 P01668 110 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 SagP20443 403 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Clk1P22518 483 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Zfp36l2P23949 484 aaKnown RBP10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Alox12eP55249 662 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 MagohP61327 146 aaKnown RBP10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Serpinb5P70124 375 aaKnown RBP10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 UcmaQ14BU0 138 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Pid1Q3UBG2 217 aa10.08□□□□□ -0.8
Ccdc60-202ENSMUST00000086483 Ccdc160Q3UYG1 323 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms