Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Gm25239-201ENSMUST00000174915 86 ntBASIC34.04■■■■□ 3.04
Abcd4O89016 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Abcd4O89016 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Abcd4O89016 Gm15042-201ENSMUST00000120212 883 ntBASIC29.8■■■□□ 2.36
Abcd4O89016 Gm24109-201ENSMUST00000175489 103 ntBASIC29.48■■■□□ 2.31
Abcd4O89016 Gm15045-201ENSMUST00000117359 883 ntBASIC29.04■■■□□ 2.24
Abcd4O89016 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Abcd4O89016 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Abcd4O89016 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Abcd4O89016 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Abcd4O89016 Gm23366-201ENSMUST00000175022 89 ntBASIC28.5■■■□□ 2.15
Abcd4O89016 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Abcd4O89016 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abcd4O89016 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Abcd4O89016 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Abcd4O89016 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Abcd4O89016 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Abcd4O89016 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Abcd4O89016 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.48■■□□□ 1.99
Abcd4O89016 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Abcd4O89016 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Abcd4O89016 Psd-208ENSMUST00000224556 2034 ntBASIC27.36■■□□□ 1.97
Abcd4O89016 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.36■■□□□ 1.97
Abcd4O89016 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.28■■□□□ 1.96
Abcd4O89016 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
Abcd4O89016 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Abcd4O89016 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Abcd4O89016 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Abcd4O89016 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
Abcd4O89016 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Abcd4O89016 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.93■■□□□ 1.9
Abcd4O89016 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Abcd4O89016 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Abcd4O89016 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Abcd4O89016 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Abcd4O89016 Gm25238-201ENSMUST00000174914 89 ntBASIC26.81■■□□□ 1.88
Abcd4O89016 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.81■■□□□ 1.88
Abcd4O89016 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Abcd4O89016 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Abcd4O89016 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
Abcd4O89016 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.32■■□□□ 1.8
Abcd4O89016 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Abcd4O89016 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.25■■□□□ 1.79
Abcd4O89016 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Abcd4O89016 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.08■■□□□ 1.77
Abcd4O89016 Gm27325-201ENSMUST00000175467 74 ntBASIC26.05■■□□□ 1.76
Abcd4O89016 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
Abcd4O89016 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Abcd4O89016 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Abcd4O89016 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Abcd4O89016 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Abcd4O89016 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Abcd4O89016 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Abcd4O89016 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.94■■□□□ 1.74
Abcd4O89016 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.9■■□□□ 1.74
Abcd4O89016 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Abcd4O89016 Gm25262-201ENSMUST00000174934 133 ntBASIC25.8■■□□□ 1.72
Abcd4O89016 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Abcd4O89016 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.68■■□□□ 1.7
Abcd4O89016 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Abcd4O89016 Rab21-202ENSMUST00000218831 843 ntBASIC25.64■■□□□ 1.7
Abcd4O89016 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Abcd4O89016 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Abcd4O89016 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Abcd4O89016 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.57■■□□□ 1.68
Abcd4O89016 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.57■■□□□ 1.68
Abcd4O89016 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Abcd4O89016 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Abcd4O89016 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Abcd4O89016 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Abcd4O89016 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Abcd4O89016 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.39■■□□□ 1.66
Abcd4O89016 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
Abcd4O89016 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Abcd4O89016 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.32■■□□□ 1.64
Abcd4O89016 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Abcd4O89016 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.27■■□□□ 1.64
Abcd4O89016 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Abcd4O89016 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Abcd4O89016 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Abcd4O89016 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Abcd4O89016 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Abcd4O89016 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Abcd4O89016 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Abcd4O89016 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.17■■□□□ 1.62
Abcd4O89016 Gm26115-201ENSMUST00000175605 87 ntBASIC25.16■■□□□ 1.62
Abcd4O89016 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Abcd4O89016 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Abcd4O89016 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Abcd4O89016 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Abcd4O89016 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Abcd4O89016 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Abcd4O89016 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.06■■□□□ 1.6
Abcd4O89016 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Abcd4O89016 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Abcd4O89016 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Abcd4O89016 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Abcd4O89016 Gm42596-201ENSMUST00000196305 1958 ntBASIC25■■□□□ 1.59
Abcd4O89016 Gm8109-201ENSMUST00000194076 746 ntBASIC24.98■■□□□ 1.59
Abcd4O89016 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms